FFCP PHASE1:Hg19::chr6:17281214..17281228,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=221662|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21539|TSSclassifier=S|UniProt=Q9BX46|association_with_transcript=-348bp_to_ENST00000379052_5end|coexpression_cluster_id=C9|description=CAGE_peak_2_at_RBM24_5end|id=chr6:17281214..17281228,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000188;2.08e-08;9|ontology_enrichment_celltype_v019_2=CL:0000188,2.20e-08,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!5.46e-20!365;UBERON:0007023!1.98e-19!115;UBERON:0000481!6.72e-18!347;UBERON:0000483!4.95e-14!309;UBERON:0000119!2.01e-13!312;UBERON:0000468!3.00e-13!659;UBERON:0003075!1.27e-12!86;UBERON:0007284!1.27e-12!86;UBERON:0000153!9.34e-12!129;UBERON:0007811!9.34e-12!129;UBERON:0004121!1.51e-11!169;UBERON:0000033!3.63e-11!123;UBERON:0002346!3.93e-11!90;UBERON:0000924!1.35e-10!173;UBERON:0006601!1.35e-10!173;UBERON:0000073!1.54e-10!94;UBERON:0001016!1.54e-10!94;UBERON:0003056!2.15e-10!61;UBERON:0005743!2.87e-10!86;UBERON:0000467!3.05e-10!625;UBERON:0000480!4.26e-10!626;UBERON:0002616!1.60e-09!59;UBERON:0001049!1.83e-09!57;UBERON:0005068!1.83e-09!57;UBERON:0006241!1.83e-09!57;UBERON:0007135!1.83e-09!57;UBERON:0002780!1.98e-09!41;UBERON:0001890!1.98e-09!41;UBERON:0006240!1.98e-09!41;UBERON:0003080!6.23e-09!42;UBERON:0001017!1.19e-08!82;UBERON:0001869!1.28e-08!32;UBERON:0004111!1.60e-08!241;UBERON:0002020!2.23e-08!34;UBERON:0003528!2.23e-08!34;UBERON:0000477!2.99e-08!286;UBERON:0001893!3.92e-08!34;UBERON:0000955!4.09e-08!69;UBERON:0006238!4.09e-08!69;UBERON:0000956!5.00e-08!25;UBERON:0000203!5.00e-08!25;UBERON:0002791!5.54e-08!33;UBERON:0001950!6.55e-08!20;UBERON:0000922!1.15e-07!612;UBERON:0002619!1.63e-07!22;UBERON:0005256!5.40e-07!143;UBERON:0000025!6.26e-07!194;UBERON:0000062!8.02e-07!511|ontology_enrichment_uberon_v019=UBERON:0001134;4.11e-16;16!UBERON:0002036;4.11e-16;16!UBERON:0002385;1.03e-09;31!UBERON:0001015;1.03e-09;31!UBERON:0000383;1.03e-09;31!UBERON:0007625;2.73e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.70e-14,114;UBERON:0000483,4.43e-08,306;UBERON:0010314,7.25e-08,132;UBERON:0000119,8.49e-08,309;UBERON:0003056,1.40e-07,61;UBERON:0007625,1.81e-07,11|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0,1.34465029290355,2.41077811209591,0,0,0.861847406537515,1.83600622119828,0.313454721478088,0.85870796139317,0.547497700291537,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.434539556882471,0,0,0.283604451492204,1.99556457716308,1.93236528524877,1.30979075497713,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0,0,0,0.208994966536811,0,0,1.00416183829401,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.662045904066094,0,0,1.12135520028461,2.1349799145941,2.22000793575444,0.622422070799533,0,0.163461903113459,0.151357427644931,0,0.70296429550139,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0.61417158655884,0.619954687054593,0,0.741800787835671,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0.30648779579902,1.20190447125277,0.340296549480063,1.61450672119976,0.640672166455702,0.211931901159562,0.900273288253207,1.03052529238439,1.8034837803194,0.930584281657949,1.0126579934476,1.36411807225678,0.504867548488229,0.184099797284599,0.161646056818812,2.84007674013291,2.41805035746337,1.86516651541536,0.966304265816484,1.36373060295417,1.14721838155602,0.121973706129595,0.397589304964456,0.580969714347592,0.621966330092223,0,0,0,1.28648187638577,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,7.01208869017229,0.4115740113314,5.88034845542168,0,0,0.590789906681404,0,0,1.20097467208968,0.878002283269004,0,0,0.0925884451585296,0,0,0,7.07175470347969,2.7003999674239,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,1.17587489739202,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.387815147273333,0,0.845302752556,7.1803291477915,8.32059495290929,0,0,0,0,0,0,0,0.355391948742546,0,1.20575750823834,0.871533458600294,0.399891964728228,0,0,0,0.718874566474748,0,5.70547620162874,2.89562613335158,1.64381058040307,7.87868238255541,0,0,0,0,0,2.60279707715243,1.54657762555539,1.00509759200609,0,0,0,0,0.24538298343828,0,0,2.70362119990049,1.96271887676878,6.78120384645919,3.27995961979597,0.300946099727719,0,0,1.99267679560631,0.921845842708516,0.434418072340414,1.17480694477644,24.3631830905708,0,0,0.213455115606889,0,0,0,1.24053903909388,1.38115775959256,0.841980283299221,0.256278298511402,0.511707249066704,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=221662 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21539 | |||
|TSSclassifier=S | |||
|UniProt=Q9BX46 | |||
|association_with_transcript=-348bp_to_ENST00000379052_5end | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_2_at_RBM24_5end | |||
|id=chr6:17281214..17281228,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.08e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.20e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.46e-20!365;UBERON:0007023!1.98e-19!115;UBERON:0000481!6.72e-18!347;UBERON:0000483!4.95e-14!309;UBERON:0000119!2.01e-13!312;UBERON:0000468!3.00e-13!659;UBERON:0003075!1.27e-12!86;UBERON:0007284!1.27e-12!86;UBERON:0000153!9.34e-12!129;UBERON:0007811!9.34e-12!129;UBERON:0004121!1.51e-11!169;UBERON:0000033!3.63e-11!123;UBERON:0002346!3.93e-11!90;UBERON:0000924!1.35e-10!173;UBERON:0006601!1.35e-10!173;UBERON:0000073!1.54e-10!94;UBERON:0001016!1.54e-10!94;UBERON:0003056!2.15e-10!61;UBERON:0005743!2.87e-10!86;UBERON:0000467!3.05e-10!625;UBERON:0000480!4.26e-10!626;UBERON:0002616!1.60e-09!59;UBERON:0001049!1.83e-09!57;UBERON:0005068!1.83e-09!57;UBERON:0006241!1.83e-09!57;UBERON:0007135!1.83e-09!57;UBERON:0002780!1.98e-09!41;UBERON:0001890!1.98e-09!41;UBERON:0006240!1.98e-09!41;UBERON:0003080!6.23e-09!42;UBERON:0001017!1.19e-08!82;UBERON:0001869!1.28e-08!32;UBERON:0004111!1.60e-08!241;UBERON:0002020!2.23e-08!34;UBERON:0003528!2.23e-08!34;UBERON:0000477!2.99e-08!286;UBERON:0001893!3.92e-08!34;UBERON:0000955!4.09e-08!69;UBERON:0006238!4.09e-08!69;UBERON:0000956!5.00e-08!25;UBERON:0000203!5.00e-08!25;UBERON:0002791!5.54e-08!33;UBERON:0001950!6.55e-08!20;UBERON:0000922!1.15e-07!612;UBERON:0002619!1.63e-07!22;UBERON:0005256!5.40e-07!143;UBERON:0000025!6.26e-07!194;UBERON:0000062!8.02e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.11e-16;16!UBERON:0002036;4.11e-16;16!UBERON:0002385;1.03e-09;31!UBERON:0001015;1.03e-09;31!UBERON:0000383;1.03e-09;31!UBERON:0007625;2.73e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.70e-14,114;UBERON:0000483,4.43e-08,306;UBERON:0010314,7.25e-08,132;UBERON:0000119,8.49e-08,309;UBERON:0003056,1.40e-07,61;UBERON:0007625,1.81e-07,11 | |||
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| |||
|short_description=p2@RBM24 | |||
}} |
Revision as of 19:29, 13 September 2013
Short description: | p2@RBM24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RBM24_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | -348bp_to_ENST00000379052_5end |
EntrezGene: | RBM24 |
HGNC: | 21539 |
UniProt: | Q9BX46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.20e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.70e-14 | 114 |
epithelium | 4.43e-08 | 306 |
structure with developmental contribution from neural crest | 7.25e-08 | 132 |
cell layer | 8.49e-08 | 309 |
pre-chordal neural plate | 1.40e-07 | 61 |
pigment epithelium of eye | 1.81e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.