FFCP PHASE1:Hg19::chr6:293545..293553,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C489|description=CAGE_peak_at_chr6:293545..293553,-|id=chr6:293545..293553,-|ontology_enrichment_celltype=CL:0000738!3.67e-40!140;CL:0002087!2.55e-33!119;CL:0000988!4.87e-33!182;CL:0002057!2.34e-32!42;CL:0000037!5.20e-32!172;CL:0000566!5.20e-32!172;CL:0002031!1.52e-31!124;CL:0002032!7.38e-30!165;CL:0000837!7.38e-30!165;CL:0000860!1.30e-29!45;CL:0002009!3.91e-26!65;CL:0000557!1.09e-24!71;CL:0002194!3.33e-23!63;CL:0000576!3.33e-23!63;CL:0000040!3.33e-23!63;CL:0000559!3.33e-23!63;CL:0000766!2.54e-22!76;CL:0000839!1.83e-21!70;CL:0000763!4.17e-20!112;CL:0000049!4.17e-20!112;CL:0002393!4.53e-14!9;CL:0002397!4.53e-14!9;CL:0000453!1.55e-11!5;CL:0000134!9.94e-10!358;CL:0002320!3.15e-09!365;CL:0000542!4.05e-09!53;CL:0000051!4.05e-09!53;CL:0000451!5.74e-09!10;CL:0000990!2.53e-08!8;CL:0000838!2.89e-08!52;CL:0000080!3.40e-08!6;CL:0000623!4.99e-08!3;CL:0000825!4.99e-08!3;CL:0000219!6.29e-08!390|ontology_enrichment_celltype_v019=CL:0000623;5.42e-31;3!CL:0001014;9.61e-22;2!CL:0001016;9.61e-22;2!CL:0002393;1.36e-15;6!CL:0002397;1.36e-15;6!CL:0000453;2.94e-09;5!CL:0000840;7.44e-08;5!CL:0000766;9.74e-08;69!CL:0000576;5.78e-07;48|ontology_enrichment_celltype_v019_2=CL:0000623,4.91e-31,3;CL:0000825,4.91e-31,3;CL:0001014,9.15e-22,2;CL:0001016,9.15e-22,2;CL:0002009,1.15e-14,61;CL:0000738,3.51e-14,136;CL:0002031,4.59e-14,120;CL:0000557,3.01e-13,67;CL:0000473,3.06e-12,48;CL:0000234,3.06e-12,48;CL:0002032,1.25e-11,161;CL:0000837,1.25e-11,161;CL:0000037,4.74e-11,168;CL:0000860,6.84e-11,42;CL:0002057,6.84e-11,42;CL:0002393,9.96e-11,9;CL:0002397,9.96e-11,9;CL:0002087,1.56e-10,115;CL:0000988,2.27e-10,177;CL:0000766,8.03e-10,72;CL:0002194,1.33e-09,59;CL:0000576,1.33e-09,59;CL:0000040,1.33e-09,59;CL:0000559,1.33e-09,59;CL:0000763,1.84e-09,108;CL:0000049,1.84e-09,108;CL:0000453,2.88e-09,5;CL:0000839,1.68e-08,66;CL:0000840,7.32e-08,5;CL:0001029,7.32e-08,5|ontology_enrichment_development_v019=CL:0002057;8.85e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;3.11e-11;1!DOID:0070004;3.11e-11;1|ontology_enrichment_disease_v019_2=DOID:4960,1.78e-11,1;DOID:0070004,1.78e-11,1|ontology_enrichment_uberon=UBERON:0002390!2.13e-28!102;UBERON:0003061!2.13e-28!102;UBERON:0002193!2.07e-27!112;UBERON:0002371!1.81e-22!80;UBERON:0001474!3.36e-20!86;UBERON:0002405!6.49e-20!115;UBERON:0004765!9.76e-16!101;UBERON:0001434!9.76e-16!101;UBERON:0002384!1.50e-08!375;UBERON:0003081!2.43e-08!216;UBERON:0002204!1.32e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.70e-14,76;UBERON:0001474,6.40e-13,82;UBERON:0004765,1.22e-11,90;UBERON:0002405,3.23e-11,93;UBERON:0002390,1.44e-10,98;UBERON:0003061,1.44e-10,98;UBERON:0001434,2.52e-10,100;UBERON:0002193,1.91e-09,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.328402357799783,0.236132343941038,2.75354993794233,0,0.77408061658038,0,0,0,0,0.426507697462265,0,1.66198622559563,1.80490002723128,2.60413044859022,0,0,0.257575567634187,0,0,0,0.929716147622738,0,0,0.575384784644301,0.256160706529101,0.236482229888585,1.37898272294647,0,0,0.752969358170419,0.545812300115692,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0.659702600373432,0.398927315243264,0,0,0,0,0.75374599577023,1.0429658368404,1.08594422352558,0,1.47311054395026,0.949387162322653,0.422510572623884,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,1.68152568894461,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,3.15249216323084,2.37190332345469,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C489 | |||
|description=CAGE_peak_at_chr6:293545..293553,- | |||
|id=chr6:293545..293553,- | |||
|ontology_enrichment_celltype=CL:0000738!3.67e-40!140;CL:0002087!2.55e-33!119;CL:0000988!4.87e-33!182;CL:0002057!2.34e-32!42;CL:0000037!5.20e-32!172;CL:0000566!5.20e-32!172;CL:0002031!1.52e-31!124;CL:0002032!7.38e-30!165;CL:0000837!7.38e-30!165;CL:0000860!1.30e-29!45;CL:0002009!3.91e-26!65;CL:0000557!1.09e-24!71;CL:0002194!3.33e-23!63;CL:0000576!3.33e-23!63;CL:0000040!3.33e-23!63;CL:0000559!3.33e-23!63;CL:0000766!2.54e-22!76;CL:0000839!1.83e-21!70;CL:0000763!4.17e-20!112;CL:0000049!4.17e-20!112;CL:0002393!4.53e-14!9;CL:0002397!4.53e-14!9;CL:0000453!1.55e-11!5;CL:0000134!9.94e-10!358;CL:0002320!3.15e-09!365;CL:0000542!4.05e-09!53;CL:0000051!4.05e-09!53;CL:0000451!5.74e-09!10;CL:0000990!2.53e-08!8;CL:0000838!2.89e-08!52;CL:0000080!3.40e-08!6;CL:0000623!4.99e-08!3;CL:0000825!4.99e-08!3;CL:0000219!6.29e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000623;5.42e-31;3!CL:0001014;9.61e-22;2!CL:0001016;9.61e-22;2!CL:0002393;1.36e-15;6!CL:0002397;1.36e-15;6!CL:0000453;2.94e-09;5!CL:0000840;7.44e-08;5!CL:0000766;9.74e-08;69!CL:0000576;5.78e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.91e-31,3;CL:0000825,4.91e-31,3;CL:0001014,9.15e-22,2;CL:0001016,9.15e-22,2;CL:0002009,1.15e-14,61;CL:0000738,3.51e-14,136;CL:0002031,4.59e-14,120;CL:0000557,3.01e-13,67;CL:0000473,3.06e-12,48;CL:0000234,3.06e-12,48;CL:0002032,1.25e-11,161;CL:0000837,1.25e-11,161;CL:0000037,4.74e-11,168;CL:0000860,6.84e-11,42;CL:0002057,6.84e-11,42;CL:0002393,9.96e-11,9;CL:0002397,9.96e-11,9;CL:0002087,1.56e-10,115;CL:0000988,2.27e-10,177;CL:0000766,8.03e-10,72;CL:0002194,1.33e-09,59;CL:0000576,1.33e-09,59;CL:0000040,1.33e-09,59;CL:0000559,1.33e-09,59;CL:0000763,1.84e-09,108;CL:0000049,1.84e-09,108;CL:0000453,2.88e-09,5;CL:0000839,1.68e-08,66;CL:0000840,7.32e-08,5;CL:0001029,7.32e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;8.85e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;3.11e-11;1!DOID:0070004;3.11e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.78e-11,1;DOID:0070004,1.78e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.13e-28!102;UBERON:0003061!2.13e-28!102;UBERON:0002193!2.07e-27!112;UBERON:0002371!1.81e-22!80;UBERON:0001474!3.36e-20!86;UBERON:0002405!6.49e-20!115;UBERON:0004765!9.76e-16!101;UBERON:0001434!9.76e-16!101;UBERON:0002384!1.50e-08!375;UBERON:0003081!2.43e-08!216;UBERON:0002204!1.32e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.70e-14,76;UBERON:0001474,6.40e-13,82;UBERON:0004765,1.22e-11,90;UBERON:0002405,3.23e-11,93;UBERON:0002390,1.44e-10,98;UBERON:0003061,1.44e-10,98;UBERON:0001434,2.52e-10,100;UBERON:0002193,1.91e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.328402357799783,0.236132343941038,2.75354993794233,0,0.77408061658038,0,0,0,0,0.426507697462265,0,1.66198622559563,1.80490002723128,2.60413044859022,0,0,0.257575567634187,0,0,0,0.929716147622738,0,0,0.575384784644301,0.256160706529101,0.236482229888585,1.37898272294647,0,0,0.752969358170419,0.545812300115692,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0.659702600373432,0.398927315243264,0,0,0,0,0.75374599577023,1.0429658368404,1.08594422352558,0,1.47311054395026,0.949387162322653,0.422510572623884,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,1.68152568894461,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,3.15249216323084,2.37190332345469,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82455615637551,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0.121792598380896,0.638341257770182,0,0.7520696820681,1.22538230705385,1.31149052283922,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.797189041880179,0.490696182767533,0,0.245772908753719,0,0,0,1.72214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:293545..293553,- | |||
}} |
Revision as of 19:55, 13 September 2013
Short description: | p@chr6:293545..293553, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:293545..293553, - |
Coexpression cluster: | C489_immature_CD14_Natural_Basophils_CD8_CD4_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.70e-14 | 76 |
bone element | 6.40e-13 | 82 |
skeletal element | 1.22e-11 | 90 |
immune system | 3.23e-11 | 93 |
hematopoietic system | 1.44e-10 | 98 |
blood island | 1.44e-10 | 98 |
skeletal system | 2.52e-10 | 100 |
hemolymphoid system | 1.91e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.78e-11 | 1 |
myeloma | 1.78e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.