FFCP PHASE1:Hg19::chr5:135382010..135382029,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7045|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=11771|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc011cyb.1_5end|coexpression_cluster_id=C295|description=CAGE_peak_11_at_TGFBI_5end|id=chr5:135382010..135382029,+|ontology_enrichment_celltype=CL:0000055!4.71e-26!180;CL:0002371!3.22e-20!591;CL:0000548!1.89e-18!679;CL:0000004!1.89e-18!679;CL:0000255!1.89e-18!679;CL:0000144!2.73e-18!625;CL:0000012!9.30e-18!682;CL:0000680!2.36e-16!57;CL:0000056!2.36e-16!57;CL:0000355!2.36e-16!57;CL:0000048!8.51e-15!430;CL:0000057!1.15e-14!75;CL:0000187!1.34e-14!54;CL:0000723!4.63e-14!436;CL:0000183!7.61e-13!59;CL:0000034!1.96e-12!444;CL:0000192!3.04e-12!42;CL:0000514!3.04e-12!42;CL:0000393!4.43e-11!60;CL:0000211!4.43e-11!60;CL:0000003!8.07e-11!722;CL:0000359!7.29e-10!32;CL:0002009!2.89e-09!65;CL:0002194!4.01e-09!63;CL:0000576!4.01e-09!63;CL:0000040!4.01e-09!63;CL:0000559!4.01e-09!63;CL:0002057!1.73e-08!42;CL:0002334!4.08e-08!12;CL:0002620!5.67e-08!23;CL:0000860!2.33e-07!45;CL:0002320!3.76e-07!365;CL:0000557!4.93e-07!71|ontology_enrichment_celltype_v019=CL:0000359;4.77e-10;32!CL:0002334;1.65e-09;12!CL:0000192;8.92e-08;43!CL:0002620;1.16e-07;23!CL:0000187;1.58e-07;55!CL:0000860;1.77e-07;33!CL:0002057;1.77e-07;33!CL:0000473;5.13e-07;39!CL:0000234;5.13e-07;39|ontology_enrichment_celltype_v019_2=CL:0000048,2.46e-20,427;CL:0000723,2.59e-19,433;CL:0000034,5.26e-18,441;CL:0000680,2.11e-14,58;CL:0000056,2.11e-14,58;CL:0000355,2.11e-14,58;CL:0000057,1.44e-13,76;CL:0000187,2.35e-12,55;CL:0000192,1.11e-10,43;CL:0000514,1.11e-10,43;CL:0002320,1.25e-10,361;CL:0000359,2.14e-10,32;CL:0000134,3.03e-10,354;CL:0000393,5.73e-10,61;CL:0000211,5.73e-10,61;CL:0002334,1.89e-09,12;CL:0000219,5.68e-09,386;CL:0002620,1.03e-07,23;CL:0000473,8.52e-07,48;CL:0000234,8.52e-07,48|ontology_enrichment_development_v019=CL:0000514;8.92e-08;43!CL:0000355;1.45e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.85e-19!167;UBERON:0000486!4.02e-16!82;UBERON:0001134!6.87e-15!61;UBERON:0002036!6.87e-15!61;UBERON:0003082!6.87e-15!61;UBERON:0004290!4.59e-14!70;UBERON:0000914!5.81e-14!83;UBERON:0002329!5.81e-14!83;UBERON:0003077!5.81e-14!83;UBERON:0003059!5.81e-14!83;UBERON:0007282!5.81e-14!83;UBERON:0009618!5.81e-14!83;UBERON:0007285!5.81e-14!83;UBERON:0002385!1.10e-13!63;UBERON:0001015!1.10e-13!63;UBERON:0000383!1.10e-13!63;UBERON:0000926!5.81e-11!448;UBERON:0004120!5.81e-11!448;UBERON:0006603!5.81e-11!448;UBERON:0005256!5.68e-09!143;UBERON:0000490!1.33e-08!138;UBERON:0000468!1.85e-08!659;UBERON:0002100!2.59e-08!216;UBERON:0002384!2.61e-07!375|ontology_enrichment_uberon_v019=UBERON:0004573;4.97e-08;33!UBERON:0004571;4.97e-08;33!UBERON:0004457;2.96e-07;9!UBERON:0000042;2.96e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.37e-16,167;UBERON:0001134,1.35e-12,62;UBERON:0002036,1.35e-12,62;UBERON:0003082,1.35e-12,62;UBERON:0002385,8.67e-12,64;UBERON:0001015,8.67e-12,64;UBERON:0000383,8.67e-12,64;UBERON:0000486,2.22e-11,83;UBERON:0000926,4.18e-11,315;UBERON:0004120,4.18e-11,315;UBERON:0006603,4.18e-11,315;UBERON:0002384,8.88e-11,371;UBERON:0007524,5.73e-10,73;UBERON:0002329,6.33e-10,71;UBERON:0003059,6.33e-10,71;UBERON:0007282,6.33e-10,71;UBERON:0004290,6.33e-10,71;UBERON:0009618,6.33e-10,71;UBERON:0003077,1.30e-09,72;UBERON:0007285,1.30e-09,72;UBERON:0001637,1.14e-08,42;UBERON:0003509,1.14e-08,42;UBERON:0004572,1.14e-08,42;UBERON:0007503,1.36e-08,78;UBERON:0004573,1.80e-08,33;UBERON:0004571,1.80e-08,33|phase1_expression=5.4503513781167,11.7755288140041,5.49722175974288,4.00293193412522,9.38618298297304,7.85104671690332,2.53299878168311,0.631719873426831,0,3.19454117451962,3.48900583986214,4.15038607047327,2.90143676051299,0.123766352960047,0.994192127183747,11.4295274896802,13.8619741445515,5.84248072309899,6.34312638427659,4.43235809076436,5.71201935483908,4.70182082217132,0.572471974262113,2.87436292653057,0.87879847716362,0,0,0,0.393364276848904,0,0.309632246632152,0.919421224478927,2.409647350226,0.739508020333575,0,0,0,1.10799081706375,1.20326668482085,0.868043482863407,0,0,0.257575567634187,2.61716829803216,1.88937971844405,1.94067248950253,1.39457422143411,3.70051099219643,2.16794459626573,3.45230870786581,3.58624989140741,1.41889337933151,1.37898272294647,1.29096936716765,1.35426486594342,3.76484679085209,4.91231070104122,1.57306439111559,2.14258724659632,2.24650318953266,1.27867425159808,1.9791078011203,4.3882004676759,4.26224750532694,0.870627715885752,0,0.622822248995575,3.51748131359441,3.65038042894141,1.73751075764093,0.605399502633369,1.47311054395026,0.949387162322653,0.211255286311942,0.425208599930087,0.628975936525128,0.898629049171961,0.450530678524519,1.12507910687956,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,3.252952371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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11771 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc011cyb.1_5end | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_11_at_TGFBI_5end | |||
|id=chr5:135382010..135382029,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.71e-26!180;CL:0002371!3.22e-20!591;CL:0000548!1.89e-18!679;CL:0000004!1.89e-18!679;CL:0000255!1.89e-18!679;CL:0000144!2.73e-18!625;CL:0000012!9.30e-18!682;CL:0000680!2.36e-16!57;CL:0000056!2.36e-16!57;CL:0000355!2.36e-16!57;CL:0000048!8.51e-15!430;CL:0000057!1.15e-14!75;CL:0000187!1.34e-14!54;CL:0000723!4.63e-14!436;CL:0000183!7.61e-13!59;CL:0000034!1.96e-12!444;CL:0000192!3.04e-12!42;CL:0000514!3.04e-12!42;CL:0000393!4.43e-11!60;CL:0000211!4.43e-11!60;CL:0000003!8.07e-11!722;CL:0000359!7.29e-10!32;CL:0002009!2.89e-09!65;CL:0002194!4.01e-09!63;CL:0000576!4.01e-09!63;CL:0000040!4.01e-09!63;CL:0000559!4.01e-09!63;CL:0002057!1.73e-08!42;CL:0002334!4.08e-08!12;CL:0002620!5.67e-08!23;CL:0000860!2.33e-07!45;CL:0002320!3.76e-07!365;CL:0000557!4.93e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.77e-10;32!CL:0002334;1.65e-09;12!CL:0000192;8.92e-08;43!CL:0002620;1.16e-07;23!CL:0000187;1.58e-07;55!CL:0000860;1.77e-07;33!CL:0002057;1.77e-07;33!CL:0000473;5.13e-07;39!CL:0000234;5.13e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.46e-20,427;CL:0000723,2.59e-19,433;CL:0000034,5.26e-18,441;CL:0000680,2.11e-14,58;CL:0000056,2.11e-14,58;CL:0000355,2.11e-14,58;CL:0000057,1.44e-13,76;CL:0000187,2.35e-12,55;CL:0000192,1.11e-10,43;CL:0000514,1.11e-10,43;CL:0002320,1.25e-10,361;CL:0000359,2.14e-10,32;CL:0000134,3.03e-10,354;CL:0000393,5.73e-10,61;CL:0000211,5.73e-10,61;CL:0002334,1.89e-09,12;CL:0000219,5.68e-09,386;CL:0002620,1.03e-07,23;CL:0000473,8.52e-07,48;CL:0000234,8.52e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000514;8.92e-08;43!CL:0000355;1.45e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.85e-19!167;UBERON:0000486!4.02e-16!82;UBERON:0001134!6.87e-15!61;UBERON:0002036!6.87e-15!61;UBERON:0003082!6.87e-15!61;UBERON:0004290!4.59e-14!70;UBERON:0000914!5.81e-14!83;UBERON:0002329!5.81e-14!83;UBERON:0003077!5.81e-14!83;UBERON:0003059!5.81e-14!83;UBERON:0007282!5.81e-14!83;UBERON:0009618!5.81e-14!83;UBERON:0007285!5.81e-14!83;UBERON:0002385!1.10e-13!63;UBERON:0001015!1.10e-13!63;UBERON:0000383!1.10e-13!63;UBERON:0000926!5.81e-11!448;UBERON:0004120!5.81e-11!448;UBERON:0006603!5.81e-11!448;UBERON:0005256!5.68e-09!143;UBERON:0000490!1.33e-08!138;UBERON:0000468!1.85e-08!659;UBERON:0002100!2.59e-08!216;UBERON:0002384!2.61e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.97e-08;33!UBERON:0004571;4.97e-08;33!UBERON:0004457;2.96e-07;9!UBERON:0000042;2.96e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.37e-16,167;UBERON:0001134,1.35e-12,62;UBERON:0002036,1.35e-12,62;UBERON:0003082,1.35e-12,62;UBERON:0002385,8.67e-12,64;UBERON:0001015,8.67e-12,64;UBERON:0000383,8.67e-12,64;UBERON:0000486,2.22e-11,83;UBERON:0000926,4.18e-11,315;UBERON:0004120,4.18e-11,315;UBERON:0006603,4.18e-11,315;UBERON:0002384,8.88e-11,371;UBERON:0007524,5.73e-10,73;UBERON:0002329,6.33e-10,71;UBERON:0003059,6.33e-10,71;UBERON:0007282,6.33e-10,71;UBERON:0004290,6.33e-10,71;UBERON:0009618,6.33e-10,71;UBERON:0003077,1.30e-09,72;UBERON:0007285,1.30e-09,72;UBERON:0001637,1.14e-08,42;UBERON:0003509,1.14e-08,42;UBERON:0004572,1.14e-08,42;UBERON:0007503,1.36e-08,78;UBERON:0004573,1.80e-08,33;UBERON:0004571,1.80e-08,33 | |||
|phase1_expression=5.4503513781167,11.7755288140041,5.49722175974288,4.00293193412522,9.38618298297304,7.85104671690332,2.53299878168311,0.631719873426831,0,3.19454117451962,3.48900583986214,4.15038607047327,2.90143676051299,0.123766352960047,0.994192127183747,11.4295274896802,13.8619741445515,5.84248072309899,6.34312638427659,4.43235809076436,5.71201935483908,4.70182082217132,0.572471974262113,2.87436292653057,0.87879847716362,0,0,0,0.393364276848904,0,0.309632246632152,0.919421224478927,2.409647350226,0.739508020333575,0,0,0,1.10799081706375,1.20326668482085,0.868043482863407,0,0,0.257575567634187,2.61716829803216,1.88937971844405,1.94067248950253,1.39457422143411,3.70051099219643,2.16794459626573,3.45230870786581,3.58624989140741,1.41889337933151,1.37898272294647,1.29096936716765,1.35426486594342,3.76484679085209,4.91231070104122,1.57306439111559,2.14258724659632,2.24650318953266,1.27867425159808,1.9791078011203,4.3882004676759,4.26224750532694,0.870627715885752,0,0.622822248995575,3.51748131359441,3.65038042894141,1.73751075764093,0.605399502633369,1.47311054395026,0.949387162322653,0.211255286311942,0.425208599930087,0.628975936525128,0.898629049171961,0.450530678524519,1.12507910687956,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,3.2529523714611,6.51739283826656,9.55987025141436,5.5670016293577,21.411934293316,2.26883561193763,8.20398770611487,2.89854792787316,0.196468613246569,0.364295288292542,0,2.59637914923747,1.74129737299267,4.38761269712255,1.43094374583205,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,2.43042584364528,0,0,0,0,0,0,0,0,0.436094052142534,7.9515512271251,2.40597972162702,0.397227542439656,9.75244510545967,2.12801029319014,6.16745360156538,2.1349799145941,9.8667019366864,0,0.538842688278752,1.30769522490767,1.05950199351452,1.15235184896,0.468642863667593,1.24864030732128,0.570471821544449,0.747243402759005,0.117434498643765,0.647491777472526,0.561803226808994,0.408308342509787,0.245668634623536,0.309977343527296,0,1.23633464639278,0.910161361938026,2.87447256726495,0,0,0,0.438977620880838,3.67785354958824,4.05642759047811,0.567160915800105,5.74046834204358,6.19316427573846,3.60284231971255,10.8032794590385,7.72893969288292,8.24449728146013,5.95573940261087,14.6835409049902,16.0771058515978,8.07788077581166,3.58994604704967,3.71785930683267,30.5308249564288,11.2842350014957,1.52604533079439,0.966304265816484,0.272746120590835,1.14721838155602,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0,0.55146986366197,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0.8231480226628,10.2906097969879,0,0,0,0,0.122988438543114,2.57351715447788,0.658501712451753,0,0,0.0925884451585296,0,0,2.88662684050547,0.231860809950154,1.52631302506568,0,0.462985512576611,0,0,0,0.984868024349589,0.234004265139238,3.12125440806329,0.93733833986777,5.87937448696008,1.13420077793909,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,3.92364061949952,0.36669142910475,2.06834745212444,0,7.607724773004,0,1.04007436911366,0,2.83698264046557,0.266422179016099,4.86125178437702,1.62786481617433,1.64648067356154,0.977208552881205,2.84313558994037,8.71147060226772,0.301439377059586,0,0.899756920638513,2.43247561282381,1.50677127429638,4.21667878966063,2.39624855491583,3.44585807502342,1.42636905040718,5.79125226670317,10.4792924500696,10.9227187576336,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,2.00068208423871,1.08506009479894,4.57535895367776,4.63915370872621,0.315404830067869,0.937131319941706,0.601892199455438,6.82222512167955,1.03473071292505,2.65690239414175,2.94990669666725,0.521301686808497,0.391602314925481,1.02943027143257,0,0,0.106727557803444,0,0,3.0239029332968,12.6534981987576,7.51963669111506,24.6980883101105,16.7862285524968,4.09365799253363,11.5814823223397,10.3892646511494,4.47208112027701,3.55123450626254,0.739144404124282,6.75030757938707,3.02146983995894,0,2.80709058424599,0.184161977871793,1.95184561879831,2.36718518408732,3.67148361886388,0.902399225814824,0.539107359730903,0,1.46139224653261,0.73886140225013,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0,1.72279661398852,2.60024098414608,1.6068392984416,0.676695028044854,3.08097234229289,5.98664331431905,1.65403886981437,5.37101224341368,4.93056759308377,2.55679882248303,1.15741646340759,1.4875642382488,3.45942121257191,0.893288987462089,0.4046311234222,0,11.333244485903,0.6970372701606,0.924100740528266,0,4.34966496037536,3.89180860118232,8.58749320451947,0.744316738719335,0.632758849437452,1.14378116354295,0.511795582622668,0,2.22742273548156,9.41938368239076,0.899362287916574,7.68703683260953,2.94531005864216,2.02182481573316,1.58510321173008,6.7401352998237,1.95053495635836,1.46228093778771,8.45201174054043,0.818999468447914,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| |||
|short_description=p11@TGFBI | |||
}} |
Revision as of 13:18, 13 September 2013
Short description: | p11@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | 0bp_to_uc011cyb.1_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.46e-20 | 427 |
somatic stem cell | 2.59e-19 | 433 |
stem cell | 5.26e-18 | 441 |
muscle precursor cell | 2.11e-14 | 58 |
myoblast | 2.11e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.11e-14 | 58 |
fibroblast | 1.44e-13 | 76 |
muscle cell | 2.35e-12 | 55 |
smooth muscle cell | 1.11e-10 | 43 |
smooth muscle myoblast | 1.11e-10 | 43 |
connective tissue cell | 1.25e-10 | 361 |
vascular associated smooth muscle cell | 2.14e-10 | 32 |
mesenchymal cell | 3.03e-10 | 354 |
electrically responsive cell | 5.73e-10 | 61 |
electrically active cell | 5.73e-10 | 61 |
preadipocyte | 1.89e-09 | 12 |
motile cell | 5.68e-09 | 386 |
skin fibroblast | 1.03e-07 | 23 |
defensive cell | 8.52e-07 | 48 |
phagocyte | 8.52e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.37e-16 | 167 |
skeletal muscle tissue | 1.35e-12 | 62 |
striated muscle tissue | 1.35e-12 | 62 |
myotome | 1.35e-12 | 62 |
muscle tissue | 8.67e-12 | 64 |
musculature | 8.67e-12 | 64 |
musculature of body | 8.67e-12 | 64 |
multilaminar epithelium | 2.22e-11 | 83 |
mesoderm | 4.18e-11 | 315 |
mesoderm-derived structure | 4.18e-11 | 315 |
presumptive mesoderm | 4.18e-11 | 315 |
connective tissue | 8.88e-11 | 371 |
dense mesenchyme tissue | 5.73e-10 | 73 |
somite | 6.33e-10 | 71 |
presomitic mesoderm | 6.33e-10 | 71 |
presumptive segmental plate | 6.33e-10 | 71 |
dermomyotome | 6.33e-10 | 71 |
trunk paraxial mesoderm | 6.33e-10 | 71 |
paraxial mesoderm | 1.30e-09 | 72 |
presumptive paraxial mesoderm | 1.30e-09 | 72 |
artery | 1.14e-08 | 42 |
arterial blood vessel | 1.14e-08 | 42 |
arterial system | 1.14e-08 | 42 |
epithelial vesicle | 1.36e-08 | 78 |
systemic artery | 1.80e-08 | 33 |
systemic arterial system | 1.80e-08 | 33 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.