FFCP PHASE1:Hg19::chr5:133562203..133562229,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5515|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9299|TSSclassifier=W|UniProt=B3KUN1,P67775|association_with_transcript=-253bp_to_NM_002715,uc003kze.2_5end|coexpression_cluster_id=C8|description=CAGE_peak_5_at_PPP2CA_5end|id=chr5:133562203..133562229,-|ontology_enrichment_celltype=CL:0000542!2.93e-24!53;CL:0000051!2.93e-24!53;CL:0000838!6.88e-23!52;CL:0000738!2.31e-21!140;CL:0000037!3.46e-18!172;CL:0000566!3.46e-18!172;CL:0000791!5.66e-18!18;CL:0000789!5.66e-18!18;CL:0002420!5.66e-18!18;CL:0002419!5.66e-18!18;CL:0000790!5.66e-18!18;CL:0000988!2.05e-17!182;CL:0000624!9.58e-16!6;CL:0002087!3.62e-15!119;CL:0002032!3.83e-15!165;CL:0000837!3.83e-15!165;CL:0002031!5.06e-15!124;CL:0000084!5.14e-14!25;CL:0000827!5.14e-14!25;CL:0000623!6.50e-09!3;CL:0000825!6.50e-09!3;CL:0000898!1.24e-08!3;CL:0000842!2.08e-08!3;CL:0000767!3.14e-08!3;CL:0000094!1.11e-07!8;CL:0000236!1.20e-07!14;CL:0000625!1.52e-07!11|ontology_enrichment_celltype_v019=CL:0000624;2.34e-35;6!CL:0000791;1.26e-25;18!CL:0000789;1.26e-25;18!CL:0002419;1.26e-25;18!CL:0000623;5.21e-19;3!CL:0000898;2.16e-18;3!CL:0000084;5.08e-18;25!CL:0000226;7.33e-18;3!CL:0000842;7.33e-18;3!CL:0000542;1.99e-15;53!CL:0000815;7.11e-13;2!CL:0000792;7.11e-13;2!CL:0002677;7.11e-13;2!CL:0000094;1.75e-11;8!CL:0000767;1.50e-08;3!CL:0000081;2.20e-08;11!CL:0002087;1.80e-07;104!CL:0000895;3.10e-07;1!CL:0000236;4.15e-07;13!CL:0002032;8.92e-07;1!CL:0000557;8.92e-07;1|ontology_enrichment_celltype_v019_2=CL:0000624,2.56e-35,6;CL:0000838,8.63e-26,52;CL:0000791,1.33e-25,18;CL:0000789,1.33e-25,18;CL:0002420,1.33e-25,18;CL:0002419,1.33e-25,18;CL:0000790,1.33e-25,18;CL:0000542,3.08e-25,53;CL:0000051,3.08e-25,53;CL:0000738,1.86e-23,136;CL:0000037,1.21e-19,168;CL:0000623,5.06e-19,3;CL:0000825,5.06e-19,3;CL:0000988,2.27e-18,177;CL:0000898,2.36e-18,3;CL:0000084,5.30e-18,25;CL:0000827,5.30e-18,25;CL:0000226,8.01e-18,3;CL:0000842,8.01e-18,3;CL:0002087,8.05e-18,115;CL:0002032,1.10e-15,161;CL:0000837,1.10e-15,161;CL:0002031,1.88e-13,120;CL:0000815,7.11e-13,2;CL:0000792,7.11e-13,2;CL:0002677,7.11e-13,2;CL:0000094,1.57e-11,8;CL:0000767,1.34e-08,3;CL:0000081,2.03e-08,11;CL:0000810,3.40e-07,1;CL:0000895,3.40e-07,1;CL:0002436,3.40e-07,1;CL:0002427,3.40e-07,1;CL:0002428,3.40e-07,1;CL:0002429,3.40e-07,1;CL:0002433,3.40e-07,1;CL:0002431,3.40e-07,1;CL:0002432,3.40e-07,1|ontology_enrichment_development_v019=CL:0000790;1.26e-25;18!CL:0000051;1.99e-15;53!CL:0002427;3.10e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,2.68680578668049,0.928896739896456,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0.553995408531877,2.00544447470142,2.60413044859022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0.182664153764634,1.75996244461323,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,2.27685187643779,2.93618594685469,2.6759125968766,1.32171328579026,1.12101712596307,0,9.63877873557782,9.82526906872912,11.308082444973,0,3.2592226663359,2.36723902867367,1.94826728407911,0.111410456885174,4.41908861212256,2.43687284041983,1.62482318259009,0.384273959177026,0.130059347559878,0,0,0,0.741432815810302,0.267540828089713,0,0.226618685395132,3.06576394881537,4.46715679127419,2.27717722817553,0,0,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0,15.9269327147539,13.3720097891754,12.3100743300379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3832454947407,10.1344960183973,12.4492745191356,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,3.23571301227925,3.30855429190677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412618309791701,0,0.2249738915515,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0|short_description=p5@PPP2CA}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5515 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9299 | |||
|TSSclassifier=W | |||
|UniProt=B3KUN1,P67775 | |||
|association_with_transcript=-253bp_to_NM_002715,uc003kze.2_5end | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_5_at_PPP2CA_5end | |||
|id=chr5:133562203..133562229,- | |||
|ontology_enrichment_celltype=CL:0000542!2.93e-24!53;CL:0000051!2.93e-24!53;CL:0000838!6.88e-23!52;CL:0000738!2.31e-21!140;CL:0000037!3.46e-18!172;CL:0000566!3.46e-18!172;CL:0000791!5.66e-18!18;CL:0000789!5.66e-18!18;CL:0002420!5.66e-18!18;CL:0002419!5.66e-18!18;CL:0000790!5.66e-18!18;CL:0000988!2.05e-17!182;CL:0000624!9.58e-16!6;CL:0002087!3.62e-15!119;CL:0002032!3.83e-15!165;CL:0000837!3.83e-15!165;CL:0002031!5.06e-15!124;CL:0000084!5.14e-14!25;CL:0000827!5.14e-14!25;CL:0000623!6.50e-09!3;CL:0000825!6.50e-09!3;CL:0000898!1.24e-08!3;CL:0000842!2.08e-08!3;CL:0000767!3.14e-08!3;CL:0000094!1.11e-07!8;CL:0000236!1.20e-07!14;CL:0000625!1.52e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.34e-35;6!CL:0000791;1.26e-25;18!CL:0000789;1.26e-25;18!CL:0002419;1.26e-25;18!CL:0000623;5.21e-19;3!CL:0000898;2.16e-18;3!CL:0000084;5.08e-18;25!CL:0000226;7.33e-18;3!CL:0000842;7.33e-18;3!CL:0000542;1.99e-15;53!CL:0000815;7.11e-13;2!CL:0000792;7.11e-13;2!CL:0002677;7.11e-13;2!CL:0000094;1.75e-11;8!CL:0000767;1.50e-08;3!CL:0000081;2.20e-08;11!CL:0002087;1.80e-07;104!CL:0000895;3.10e-07;1!CL:0000236;4.15e-07;13!CL:0002032;8.92e-07;1!CL:0000557;8.92e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.56e-35,6;CL:0000838,8.63e-26,52;CL:0000791,1.33e-25,18;CL:0000789,1.33e-25,18;CL:0002420,1.33e-25,18;CL:0002419,1.33e-25,18;CL:0000790,1.33e-25,18;CL:0000542,3.08e-25,53;CL:0000051,3.08e-25,53;CL:0000738,1.86e-23,136;CL:0000037,1.21e-19,168;CL:0000623,5.06e-19,3;CL:0000825,5.06e-19,3;CL:0000988,2.27e-18,177;CL:0000898,2.36e-18,3;CL:0000084,5.30e-18,25;CL:0000827,5.30e-18,25;CL:0000226,8.01e-18,3;CL:0000842,8.01e-18,3;CL:0002087,8.05e-18,115;CL:0002032,1.10e-15,161;CL:0000837,1.10e-15,161;CL:0002031,1.88e-13,120;CL:0000815,7.11e-13,2;CL:0000792,7.11e-13,2;CL:0002677,7.11e-13,2;CL:0000094,1.57e-11,8;CL:0000767,1.34e-08,3;CL:0000081,2.03e-08,11;CL:0000810,3.40e-07,1;CL:0000895,3.40e-07,1;CL:0002436,3.40e-07,1;CL:0002427,3.40e-07,1;CL:0002428,3.40e-07,1;CL:0002429,3.40e-07,1;CL:0002433,3.40e-07,1;CL:0002431,3.40e-07,1;CL:0002432,3.40e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.26e-25;18!CL:0000051;1.99e-15;53!CL:0002427;3.10e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,2.68680578668049,0.928896739896456,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0.553995408531877,2.00544447470142,2.60413044859022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0.182664153764634,1.75996244461323,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,2.27685187643779,2.93618594685469,2.6759125968766,1.32171328579026,1.12101712596307,0,9.63877873557782,9.82526906872912,11.308082444973,0,3.2592226663359,2.36723902867367,1.94826728407911,0.111410456885174,4.41908861212256,2.43687284041983,1.62482318259009,0.384273959177026,0.130059347559878,0,0,0,0.741432815810302,0.267540828089713,0,0.226618685395132,3.06576394881537,4.46715679127419,2.27717722817553,0,0,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0,15.9269327147539,13.3720097891754,12.3100743300379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3832454947407,10.1344960183973,12.4492745191356,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,3.23571301227925,3.30855429190677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412618309791701,0,0.2249738915515,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@PPP2CA | |||
}} |
Revision as of 13:12, 13 September 2013
Short description: | p5@PPP2CA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PPP2CA_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -253bp_to_NM_002715, uc003kze.2_5end |
EntrezGene: | PPP2CA |
HGNC: | 9299 |
UniProt: | B3KUN1P67775 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.