FFCP PHASE1:Hg19::chr5:133451159..133451187,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C476|description=CAGE_peak_at_chr5:133451159..133451187,-|id=chr5:133451159..133451187,-|ontology_enrichment_celltype=CL:0000791!2.91e-32!18;CL:0000789!2.91e-32!18;CL:0002420!2.91e-32!18;CL:0002419!2.91e-32!18;CL:0000790!2.91e-32!18;CL:0000084!5.71e-28!25;CL:0000827!5.71e-28!25;CL:0000625!4.37e-22!11;CL:0000838!1.06e-18!52;CL:0000542!3.19e-18!53;CL:0000051!3.19e-18!53;CL:0000624!5.50e-14!6;CL:0000738!3.56e-12!140;CL:0002087!1.05e-11!119;CL:0000224!8.17e-10!4;CL:0002031!2.26e-08!124;CL:0000037!3.11e-08!172;CL:0000566!3.11e-08!172;CL:0000623!5.08e-08!3;CL:0000825!5.08e-08!3;CL:0000898!6.88e-08!3;CL:0000842!1.47e-07!3;CL:0000988!2.58e-07!182|ontology_enrichment_celltype_v019=CL:0000625;8.85e-66;11!CL:0000791;6.59e-48;18!CL:0000789;6.59e-48;18!CL:0002419;6.59e-48;18!CL:0000084;1.16e-40;25!CL:0000542;4.43e-10;53!CL:0000228;1.09e-08;1!CL:0002372;1.09e-08;1|ontology_enrichment_celltype_v019_2=CL:0000625,7.61e-66,11;CL:0000791,4.05e-48,18;CL:0000789,4.05e-48,18;CL:0002420,4.05e-48,18;CL:0002419,4.05e-48,18;CL:0000790,4.05e-48,18;CL:0000084,8.21e-41,25;CL:0000827,8.21e-41,25;CL:0000838,1.59e-18,52;CL:0000542,3.89e-18,53;CL:0000051,3.89e-18,53;CL:0000228,1.05e-08,1;CL:0002372,1.05e-08,1;CL:0002087,1.77e-08,115;CL:0000738,4.38e-08,136;CL:0002031,4.95e-08,120|ontology_enrichment_development_v019=CL:0000790;6.59e-48;18!CL:0000051;4.43e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!2.77e-14!15;UBERON:0000179!2.77e-14!15;UBERON:0000463!2.77e-14!15|ontology_enrichment_uberon_v019=UBERON:0002370;1.13e-16;2!UBERON:0005058;1.13e-16;2!UBERON:0009113;1.13e-16;2!UBERON:0000029;1.09e-08;1!UBERON:0000178;5.03e-08;15!UBERON:0000179;5.03e-08;15!UBERON:0000463;5.03e-08;15!UBERON:0004177;3.49e-07;5!UBERON:0005057;3.49e-07;5!UBERON:0002390;7.62e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.28e-09,1;UBERON:0002370,8.70e-09,4;UBERON:0005058,8.70e-09,4;UBERON:0009113,8.70e-09,4;UBERON:0003295,8.70e-09,4;UBERON:0005562,8.70e-09,4;UBERON:0000178,6.08e-08,15;UBERON:0000179,6.08e-08,15;UBERON:0000463,6.08e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0.164201178899891,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.393419540227666,1.96505381374582,0.205601498999509,0,0.977766799900771,1.89379122293893,0,0,0.883817722424512,0.221533894583621,0,0,0,0.328875809207352,0,0,1.18629250529648,0.267540828089713,0,0,0.383220493601921,1.71813722741315,0,2.22995790026868,5.20866763085135,2.85135613334512,1.95747654801105,1.79181255616186,1.24930726552346,1.89421801635213,0,1.00803371612366,1.60464117470104,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0.985153801009636,0.862510299438069,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,1.23408681925858,1.29694662238543,1.62009431171434,0,0,0,0,0,0,2.13425530045242,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C476 | |||
|description=CAGE_peak_at_chr5:133451159..133451187,- | |||
|id=chr5:133451159..133451187,- | |||
|ontology_enrichment_celltype=CL:0000791!2.91e-32!18;CL:0000789!2.91e-32!18;CL:0002420!2.91e-32!18;CL:0002419!2.91e-32!18;CL:0000790!2.91e-32!18;CL:0000084!5.71e-28!25;CL:0000827!5.71e-28!25;CL:0000625!4.37e-22!11;CL:0000838!1.06e-18!52;CL:0000542!3.19e-18!53;CL:0000051!3.19e-18!53;CL:0000624!5.50e-14!6;CL:0000738!3.56e-12!140;CL:0002087!1.05e-11!119;CL:0000224!8.17e-10!4;CL:0002031!2.26e-08!124;CL:0000037!3.11e-08!172;CL:0000566!3.11e-08!172;CL:0000623!5.08e-08!3;CL:0000825!5.08e-08!3;CL:0000898!6.88e-08!3;CL:0000842!1.47e-07!3;CL:0000988!2.58e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000625;8.85e-66;11!CL:0000791;6.59e-48;18!CL:0000789;6.59e-48;18!CL:0002419;6.59e-48;18!CL:0000084;1.16e-40;25!CL:0000542;4.43e-10;53!CL:0000228;1.09e-08;1!CL:0002372;1.09e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,7.61e-66,11;CL:0000791,4.05e-48,18;CL:0000789,4.05e-48,18;CL:0002420,4.05e-48,18;CL:0002419,4.05e-48,18;CL:0000790,4.05e-48,18;CL:0000084,8.21e-41,25;CL:0000827,8.21e-41,25;CL:0000838,1.59e-18,52;CL:0000542,3.89e-18,53;CL:0000051,3.89e-18,53;CL:0000228,1.05e-08,1;CL:0002372,1.05e-08,1;CL:0002087,1.77e-08,115;CL:0000738,4.38e-08,136;CL:0002031,4.95e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;6.59e-48;18!CL:0000051;4.43e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.77e-14!15;UBERON:0000179!2.77e-14!15;UBERON:0000463!2.77e-14!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.13e-16;2!UBERON:0005058;1.13e-16;2!UBERON:0009113;1.13e-16;2!UBERON:0000029;1.09e-08;1!UBERON:0000178;5.03e-08;15!UBERON:0000179;5.03e-08;15!UBERON:0000463;5.03e-08;15!UBERON:0004177;3.49e-07;5!UBERON:0005057;3.49e-07;5!UBERON:0002390;7.62e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.28e-09,1;UBERON:0002370,8.70e-09,4;UBERON:0005058,8.70e-09,4;UBERON:0009113,8.70e-09,4;UBERON:0003295,8.70e-09,4;UBERON:0005562,8.70e-09,4;UBERON:0000178,6.08e-08,15;UBERON:0000179,6.08e-08,15;UBERON:0000463,6.08e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0.164201178899891,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.393419540227666,1.96505381374582,0.205601498999509,0,0.977766799900771,1.89379122293893,0,0,0.883817722424512,0.221533894583621,0,0,0,0.328875809207352,0,0,1.18629250529648,0.267540828089713,0,0,0.383220493601921,1.71813722741315,0,2.22995790026868,5.20866763085135,2.85135613334512,1.95747654801105,1.79181255616186,1.24930726552346,1.89421801635213,0,1.00803371612366,1.60464117470104,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0.985153801009636,0.862510299438069,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,1.23408681925858,1.29694662238543,1.62009431171434,0,0,0,0,0,0,2.13425530045242,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0,0.476128862927481,3.29403440163631,9.31120714437869,0,0,0.202117188958219,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.20764276154616,0.320568492303233 | |||
|short_description=p@chr5:133451159..133451187,- | |||
}} |
Revision as of 13:11, 13 September 2013
Short description: | p@chr5:133451159..133451187, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:133451159..133451187, - |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 7.61e-66 | 11 |
mature alpha-beta T cell | 4.05e-48 | 18 |
alpha-beta T cell | 4.05e-48 | 18 |
immature T cell | 4.05e-48 | 18 |
mature T cell | 4.05e-48 | 18 |
immature alpha-beta T cell | 4.05e-48 | 18 |
T cell | 8.21e-41 | 25 |
pro-T cell | 8.21e-41 | 25 |
lymphoid lineage restricted progenitor cell | 1.59e-18 | 52 |
lymphocyte | 3.89e-18 | 53 |
common lymphoid progenitor | 3.89e-18 | 53 |
multinucleate cell | 1.05e-08 | 1 |
myotube | 1.05e-08 | 1 |
nongranular leukocyte | 1.77e-08 | 115 |
leukocyte | 4.38e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 4.95e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
lymph node | 5.28e-09 | 1 |
thymus | 8.70e-09 | 4 |
hemolymphoid system gland | 8.70e-09 | 4 |
thymic region | 8.70e-09 | 4 |
pharyngeal gland | 8.70e-09 | 4 |
thymus primordium | 8.70e-09 | 4 |
blood | 6.08e-08 | 15 |
haemolymphatic fluid | 6.08e-08 | 15 |
organism substance | 6.08e-08 | 15 |
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