FFCP PHASE1:Hg19::chr5:96293965..96293986,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4012|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6656|TSSclassifier=W|UniProt=|association_with_transcript=-168bp_to_ENST00000395770_5end|coexpression_cluster_id=C577|description=CAGE_peak_10_at_LNPEP_5end|id=chr5:96293965..96293986,+|ontology_enrichment_celltype=CL:0000945!2.55e-47!24;CL:0000826!2.55e-47!24;CL:0000838!7.38e-23!52;CL:0000542!2.33e-22!53;CL:0000051!2.33e-22!53;CL:0000236!3.97e-13!14;CL:0000785!9.31e-12!2;CL:0000955!9.31e-12!2;CL:0000818!9.31e-12!2;CL:0000954!9.31e-12!2;CL:0000816!9.31e-12!2;CL:0002087!4.35e-09!119;CL:0002031!1.40e-08!124;CL:0000738!2.88e-08!140;CL:0000817!4.09e-08!3;CL:0000784!6.66e-08!3;CL:0000819!8.67e-07!1|ontology_enrichment_celltype_v019=CL:0000945;2.35e-65;24!CL:0000542;2.66e-18;53!CL:0000785;1.41e-14;1!CL:0000819;1.41e-14;1!CL:0000236;1.24e-09;13|ontology_enrichment_celltype_v019_2=CL:0000945,2.21e-65,24;CL:0000826,2.21e-65,24;CL:0000838,1.27e-29,52;CL:0000542,4.82e-29,53;CL:0000051,4.82e-29,53;CL:0000819,1.41e-14,1;CL:0002087,1.30e-12,115;CL:0000738,1.40e-12,136;CL:0002031,4.88e-12,120;CL:0000037,6.34e-10,168;CL:0000988,2.39e-09,177;CL:0000236,5.68e-09,14;CL:0002032,1.18e-08,161;CL:0000837,1.18e-08,161;CL:0000785,6.15e-08,2;CL:0000955,6.15e-08,2;CL:0000818,6.15e-08,2;CL:0000954,6.15e-08,2;CL:0000816,6.15e-08,2|ontology_enrichment_development_v019=CL:0000051;2.66e-18;53!UBERON:0001045;8.75e-15;1!CL:0000954;6.15e-08;2|ontology_enrichment_disease=DOID:0060058!1.58e-13!10;DOID:0060073!8.67e-07!1;DOID:8675!8.67e-07!1;DOID:630!9.15e-07!1;DOID:0050177!9.15e-07!1;DOID:0050427!9.15e-07!1|ontology_enrichment_disease_v019=DOID:0060058;6.74e-22;10!DOID:0060073;1.41e-14;1!DOID:8675;1.41e-14;1!DOID:630;1.84e-14;1!DOID:0050177;1.84e-14;1!DOID:0050427;1.84e-14;1|ontology_enrichment_disease_v019_2=DOID:0060058,6.74e-22,10;DOID:0060073,1.41e-14,1;DOID:8675,1.41e-14,1;DOID:630,1.61e-14,1;DOID:0050177,1.61e-14,1;DOID:0050427,1.61e-14,1|ontology_enrichment_uberon=UBERON:0007023!7.68e-08!115;UBERON:0001154!7.35e-07!1;UBERON:0001153!7.35e-07!1;UBERON:0002372!8.21e-07!1;UBERON:0001961!8.21e-07!1;UBERON:0001744!8.21e-07!1;UBERON:0001735!8.21e-07!1|ontology_enrichment_uberon_v019=UBERON:0001154;8.75e-15;1!UBERON:0001153;8.75e-15;1!UBERON:0009854;8.75e-15;1!UBERON:0002372;1.15e-14;1!UBERON:0001961;1.15e-14;1!UBERON:0001744;1.15e-14;1!UBERON:0001042;1.15e-14;1!UBERON:0001735;1.15e-14;1!UBERON:0006562;5.55e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0001154,9.36e-15,1;UBERON:0001153,9.36e-15,1;UBERON:0001045,9.36e-15,1;UBERON:0002372,1.23e-14,1;UBERON:0001961,1.23e-14,1;UBERON:0001744,1.23e-14,1;UBERON:0001735,1.23e-14,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27252499660864,6.48594656654571,9.52400453895519,0,0,0,0,0,0,20.6837425549405,10.3783539715818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28019066769952,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,2.28797964312051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3545300572164,0,0,2.8309505256046,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01400536274465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0.472834243795189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.384178889132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,1.59772660565751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.129177819672012,0,0,0,0,0,0,5.18610808212324,0.143444410785353,0,0,0,0,0,0,0,0,0,0.603821380773079,2.8851164307291|short_description=p10@LNPEP}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6656 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-168bp_to_ENST00000395770_5end | |||
|coexpression_cluster_id=C577 | |||
|description=CAGE_peak_10_at_LNPEP_5end | |||
|id=chr5:96293965..96293986,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.55e-47!24;CL:0000826!2.55e-47!24;CL:0000838!7.38e-23!52;CL:0000542!2.33e-22!53;CL:0000051!2.33e-22!53;CL:0000236!3.97e-13!14;CL:0000785!9.31e-12!2;CL:0000955!9.31e-12!2;CL:0000818!9.31e-12!2;CL:0000954!9.31e-12!2;CL:0000816!9.31e-12!2;CL:0002087!4.35e-09!119;CL:0002031!1.40e-08!124;CL:0000738!2.88e-08!140;CL:0000817!4.09e-08!3;CL:0000784!6.66e-08!3;CL:0000819!8.67e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.35e-65;24!CL:0000542;2.66e-18;53!CL:0000785;1.41e-14;1!CL:0000819;1.41e-14;1!CL:0000236;1.24e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.21e-65,24;CL:0000826,2.21e-65,24;CL:0000838,1.27e-29,52;CL:0000542,4.82e-29,53;CL:0000051,4.82e-29,53;CL:0000819,1.41e-14,1;CL:0002087,1.30e-12,115;CL:0000738,1.40e-12,136;CL:0002031,4.88e-12,120;CL:0000037,6.34e-10,168;CL:0000988,2.39e-09,177;CL:0000236,5.68e-09,14;CL:0002032,1.18e-08,161;CL:0000837,1.18e-08,161;CL:0000785,6.15e-08,2;CL:0000955,6.15e-08,2;CL:0000818,6.15e-08,2;CL:0000954,6.15e-08,2;CL:0000816,6.15e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.66e-18;53!UBERON:0001045;8.75e-15;1!CL:0000954;6.15e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.58e-13!10;DOID:0060073!8.67e-07!1;DOID:8675!8.67e-07!1;DOID:630!9.15e-07!1;DOID:0050177!9.15e-07!1;DOID:0050427!9.15e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.74e-22;10!DOID:0060073;1.41e-14;1!DOID:8675;1.41e-14;1!DOID:630;1.84e-14;1!DOID:0050177;1.84e-14;1!DOID:0050427;1.84e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.74e-22,10;DOID:0060073,1.41e-14,1;DOID:8675,1.41e-14,1;DOID:630,1.61e-14,1;DOID:0050177,1.61e-14,1;DOID:0050427,1.61e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.68e-08!115;UBERON:0001154!7.35e-07!1;UBERON:0001153!7.35e-07!1;UBERON:0002372!8.21e-07!1;UBERON:0001961!8.21e-07!1;UBERON:0001744!8.21e-07!1;UBERON:0001735!8.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;8.75e-15;1!UBERON:0001153;8.75e-15;1!UBERON:0009854;8.75e-15;1!UBERON:0002372;1.15e-14;1!UBERON:0001961;1.15e-14;1!UBERON:0001744;1.15e-14;1!UBERON:0001042;1.15e-14;1!UBERON:0001735;1.15e-14;1!UBERON:0006562;5.55e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,9.36e-15,1;UBERON:0001153,9.36e-15,1;UBERON:0001045,9.36e-15,1;UBERON:0002372,1.23e-14,1;UBERON:0001961,1.23e-14,1;UBERON:0001744,1.23e-14,1;UBERON:0001735,1.23e-14,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27252499660864,6.48594656654571,9.52400453895519,0,0,0,0,0,0,20.6837425549405,10.3783539715818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28019066769952,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,2.28797964312051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3545300572164,0,0,2.8309505256046,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01400536274465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0.472834243795189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.384178889132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,1.59772660565751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.129177819672012,0,0,0,0,0,0,5.18610808212324,0.143444410785353,0,0,0,0,0,0,0,0,0,0.603821380773079,2.8851164307291 | |||
|short_description=p10@LNPEP | |||
}} |
Revision as of 17:02, 13 September 2013
Short description: | p10@LNPEP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_LNPEP_5end |
Coexpression cluster: | C577_lymphoma_Burkitt_diffuse_b_myeloma_plasma_appendix |
Association with transcript: | -168bp_to_ENST00000395770_5end |
EntrezGene: | LNPEP |
HGNC: | 6656 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.21e-65 | 24 |
pro-B cell | 2.21e-65 | 24 |
lymphoid lineage restricted progenitor cell | 1.27e-29 | 52 |
lymphocyte | 4.82e-29 | 53 |
common lymphoid progenitor | 4.82e-29 | 53 |
B-1 B cell | 1.41e-14 | 1 |
nongranular leukocyte | 1.30e-12 | 115 |
leukocyte | 1.40e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 4.88e-12 | 120 |
hematopoietic stem cell | 6.34e-10 | 168 |
hematopoietic cell | 2.39e-09 | 177 |
B cell | 5.68e-09 | 14 |
hematopoietic oligopotent progenitor cell | 1.18e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-08 | 161 |
mature B cell | 6.15e-08 | 2 |
pre-B-II cell | 6.15e-08 | 2 |
transitional stage B cell | 6.15e-08 | 2 |
small pre-B-II cell | 6.15e-08 | 2 |
immature B cell | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 9.36e-15 | 1 |
caecum | 9.36e-15 | 1 |
midgut | 9.36e-15 | 1 |
tonsil | 1.23e-14 | 1 |
mucosa-associated lymphoid tissue | 1.23e-14 | 1 |
lymphoid tissue | 1.23e-14 | 1 |
tonsillar ring | 1.23e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.74e-22 | 10 |
lymphatic system cancer | 1.41e-14 | 1 |
lymphosarcoma | 1.41e-14 | 1 |
genetic disease | 1.61e-14 | 1 |
monogenic disease | 1.61e-14 | 1 |
xeroderma pigmentosum | 1.61e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.