FFCP PHASE1:Hg19::chr5:95053375..95053385,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22836|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18757|TSSclassifier=S|UniProt=|association_with_transcript=38bp_to_ENST00000504949,uc003klk.1_5end|coexpression_cluster_id=C34|description=CAGE_peak_30_at_RHOBTB3_5end|id=chr5:95053375..95053385,+|ontology_enrichment_celltype=CL:0002594!5.00e-17!4;CL:0002541!1.41e-10!3;CL:0002568!2.46e-08!1;CL:1001319!3.53e-08!1;CL:1000600!3.53e-08!1|ontology_enrichment_celltype_v019=CL:0002589;4.66e-21;2|ontology_enrichment_celltype_v019_2=CL:0002589,5.70e-21,2|ontology_enrichment_development_v019=UBERON:0003124;6.62e-41;1!UBERON:0004872;5.08e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4362;2.97e-09;5|ontology_enrichment_disease_v019_2=DOID:4362,2.74e-09,5|ontology_enrichment_uberon=UBERON:0001310!5.00e-17!4;UBERON:0000476!1.41e-10!3;UBERON:0000920!1.41e-10!3;UBERON:0003124!5.21e-10!7;UBERON:0005631!1.61e-08!14;UBERON:0000158!1.61e-08!14;UBERON:0001282!2.13e-08!1;UBERON:0009842!2.13e-08!1;UBERON:0003704!2.13e-08!1;UBERON:0001171!2.13e-08!1;UBERON:0001172!2.13e-08!1;UBERON:0004645!3.53e-08!1;UBERON:0001256!3.53e-08!1;UBERON:0001259!3.53e-08!1;UBERON:0000478!2.32e-07!24|ontology_enrichment_uberon_v019=UBERON:0001529;4.66e-21;2!UBERON:0007204;4.66e-21;2!UBERON:0001987;2.53e-11;4!UBERON:0000002;6.34e-08;6!UBERON:0001560;6.34e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0001529,5.70e-21,2;UBERON:0007204,5.70e-21,2;UBERON:0001987,2.53e-11,4;UBERON:0004340,2.53e-11,4;UBERON:0000995,1.27e-08,21;UBERON:0005795,2.82e-08,22;UBERON:0003975,2.82e-08,22;UBERON:0000002,5.92e-08,6;UBERON:0001560,5.92e-08,6;UBERON:0004175,2.14e-07,25;UBERON:0003124,5.08e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03856641014312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78847488557207,0,0.227884111694002,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0.392125068635479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79318464064088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,4.70122561861986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p30@RHOBTB3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=22836 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18757 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=38bp_to_ENST00000504949,uc003klk.1_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_30_at_RHOBTB3_5end | |||
|id=chr5:95053375..95053385,+ | |||
|ontology_enrichment_celltype=CL:0002594!5.00e-17!4;CL:0002541!1.41e-10!3;CL:0002568!2.46e-08!1;CL:1001319!3.53e-08!1;CL:1000600!3.53e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002589;4.66e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,5.70e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.62e-41;1!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;2.97e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.74e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001310!5.00e-17!4;UBERON:0000476!1.41e-10!3;UBERON:0000920!1.41e-10!3;UBERON:0003124!5.21e-10!7;UBERON:0005631!1.61e-08!14;UBERON:0000158!1.61e-08!14;UBERON:0001282!2.13e-08!1;UBERON:0009842!2.13e-08!1;UBERON:0003704!2.13e-08!1;UBERON:0001171!2.13e-08!1;UBERON:0001172!2.13e-08!1;UBERON:0004645!3.53e-08!1;UBERON:0001256!3.53e-08!1;UBERON:0001259!3.53e-08!1;UBERON:0000478!2.32e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;4.66e-21;2!UBERON:0007204;4.66e-21;2!UBERON:0001987;2.53e-11;4!UBERON:0000002;6.34e-08;6!UBERON:0001560;6.34e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,5.70e-21,2;UBERON:0007204,5.70e-21,2;UBERON:0001987,2.53e-11,4;UBERON:0004340,2.53e-11,4;UBERON:0000995,1.27e-08,21;UBERON:0005795,2.82e-08,22;UBERON:0003975,2.82e-08,22;UBERON:0000002,5.92e-08,6;UBERON:0001560,5.92e-08,6;UBERON:0004175,2.14e-07,25;UBERON:0003124,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03856641014312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78847488557207,0,0.227884111694002,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0.392125068635479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79318464064088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,4.70122561861986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p30@RHOBTB3 | |||
}} |
Revision as of 16:58, 13 September 2013
Short description: | p30@RHOBTB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_30_at_RHOBTB3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 38bp_to_ENST00000504949, uc003klk.1_5end |
EntrezGene: | RHOBTB3 |
HGNC: | 18757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 5.70e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 5.70e-21 | 2 |
brachiocephalic vasculature | 5.70e-21 | 2 |
placenta | 2.53e-11 | 4 |
allantois | 2.53e-11 | 4 |
uterus | 1.27e-08 | 21 |
embryonic uterus | 2.82e-08 | 22 |
internal female genitalia | 2.82e-08 | 22 |
uterine cervix | 5.92e-08 | 6 |
neck of organ | 5.92e-08 | 6 |
internal genitalia | 2.14e-07 | 25 |
chorion | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.74e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.