FFCP PHASE1:Hg19::chr5:77806360..77806396,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10184|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=6588|TSSclassifier=W|UniProt=Q6ZUX7|association_with_transcript=-151bp_to_AK125227_5end|coexpression_cluster_id=C392|description=CAGE_peak_9_at_LHFPL2_5end|id=chr5:77806360..77806396,-|ontology_enrichment_celltype=CL:0000763!5.29e-30!112;CL:0000049!5.29e-30!112;CL:0000766!6.36e-29!76;CL:0000839!7.46e-29!70;CL:0002194!3.22e-27!63;CL:0000576!3.22e-27!63;CL:0000040!3.22e-27!63;CL:0000559!3.22e-27!63;CL:0000557!1.12e-26!71;CL:0002057!8.81e-26!42;CL:0002009!9.60e-26!65;CL:0000860!5.79e-23!45;CL:0000037!1.99e-13!172;CL:0000566!1.99e-13!172;CL:0002032!1.14e-12!165;CL:0000837!1.14e-12!165;CL:0000988!2.63e-11!182;CL:0000738!9.57e-09!140;CL:0002031!1.07e-08!124;CL:0002087!1.79e-08!119;CL:0000134!2.86e-08!358;CL:0002320!1.70e-07!365|ontology_enrichment_celltype_v019=CL:0000473;1.92e-56;39!CL:0000234;1.92e-56;39!CL:0000860;1.32e-55;33!CL:0002057;1.32e-55;33!CL:0000576;7.63e-37;48!CL:0000766;7.97e-29;69!CL:0000763;2.24e-18;100!CL:0000235;5.24e-14;6!CL:0000738;1.02e-08;136!CL:0002087;2.04e-08;104!CL:0002619;5.48e-08;3!CL:0000135;6.98e-07;3!CL:0000388;6.98e-07;3|ontology_enrichment_celltype_v019_2=CL:0002194,8.35e-69,59;CL:0000576,8.35e-69,59;CL:0000040,8.35e-69,59;CL:0000559,8.35e-69,59;CL:0000766,1.67e-67,72;CL:0000473,6.89e-67,48;CL:0000234,6.89e-67,48;CL:0002009,4.09e-66,61;CL:0000839,6.09e-66,66;CL:0000557,6.99e-62,67;CL:0000763,1.48e-58,108;CL:0000049,1.48e-58,108;CL:0000860,1.81e-54,42;CL:0002057,1.81e-54,42;CL:0000037,2.95e-34,168;CL:0002032,1.02e-33,161;CL:0000837,1.02e-33,161;CL:0000988,1.22e-31,177;CL:0002087,4.13e-30,115;CL:0000738,4.46e-30,136;CL:0002031,5.94e-30,120;CL:0000134,1.01e-15,354;CL:0002320,4.72e-15,361;CL:0000235,5.69e-14,6;CL:0000034,3.97e-13,441;CL:0000219,1.05e-12,386;CL:0000048,3.50e-12,427;CL:0000723,9.55e-12,433;CL:0002619,5.37e-08,3;CL:0000135,7.52e-07,3;CL:0000388,7.52e-07,3;CL:0000767,9.05e-07,3|ontology_enrichment_development_v019=CL:0002057;8.26e-41;42!CL:0000049;1.80e-17;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.19e-28!102;UBERON:0003061!2.19e-28!102;UBERON:0002371!9.92e-26!80;UBERON:0002193!5.01e-25!112;UBERON:0001474!2.83e-23!86;UBERON:0004765!1.66e-21!101;UBERON:0001434!1.66e-21!101;UBERON:0002405!7.77e-17!115;UBERON:0002204!2.50e-15!167;UBERON:0003081!1.82e-14!216;UBERON:0007023!6.36e-14!115;UBERON:0002384!8.67e-07!375|ontology_enrichment_uberon_v019=UBERON:0007846;6.98e-07;3!UBERON:0000043;6.98e-07;3!UBERON:0007845;6.98e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.32e-58,76;UBERON:0002390,1.05e-53,98;UBERON:0003061,1.05e-53,98;UBERON:0001474,8.55e-53,82;UBERON:0002193,2.83e-47,108;UBERON:0004765,7.94e-47,90;UBERON:0002405,7.48e-45,93;UBERON:0001434,1.37e-42,100;UBERON:0002204,9.94e-28,167;UBERON:0003081,1.18e-22,203;UBERON:0002384,3.85e-14,371;UBERON:0000926,4.56e-12,315;UBERON:0004120,4.56e-12,315;UBERON:0006603,4.56e-12,315;UBERON:0007846,7.52e-07,3;UBERON:0000043,7.52e-07,3;UBERON:0007845,7.52e-07,3|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,1.91914699048606,3.09632246632152,0,0,0,0,0,2.64240395401362,2.21598163412751,1.20326668482085,2.38711957787437,10.3001118150365,11.6601719766833,9.78787157009909,14.1036291616178,15.1150377475524,10.1885305698883,23.0104746536628,20.9695622891131,11.7688420940139,10.0692337312753,8.19714260893122,6.85798466676897,7.58440497620561,5.80936215225443,0,17.3182952379196,13.3724013528344,8.98893937780339,11.6311879100943,9.9487998393589,5.75403413219137,10.5552416059749,9.57425556583833,8.09827026012119,11.8985787837719,8.5107783703671,9.34233373493363,7.03496262718881,7.82224377630302,7.8187984093842,9.6863920421339,8.47038562771399,7.27863491114034,0,0.212604299965044,0,1.01095768031846,0.600707571366025,1.12507910687956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,3.36305137788922,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,3.50936537445123,1.59331170856906,0,0,0,0,0,0.392937226493138,0,0,1.29818957461873,1.21890816109487,1.19662164466979,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,1.32409180813219,0,0.709336764396714,0,0,0.24666754841716,0,1.88594940897563,0.980771418680752,0,0,0,0.624320153660641,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0.150238058906597,1.47461838108027,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0495013226321,5.38209809820247,5.35072184239422,0.93733833986777,0,0,0.0895585227028483,0,0,0,0.352193736052904,0.621984346622316,0.720599767084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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10184 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6588 | |||
|TSSclassifier=W | |||
|UniProt=Q6ZUX7 | |||
|association_with_transcript=-151bp_to_AK125227_5end | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_9_at_LHFPL2_5end | |||
|id=chr5:77806360..77806396,- | |||
|ontology_enrichment_celltype=CL:0000763!5.29e-30!112;CL:0000049!5.29e-30!112;CL:0000766!6.36e-29!76;CL:0000839!7.46e-29!70;CL:0002194!3.22e-27!63;CL:0000576!3.22e-27!63;CL:0000040!3.22e-27!63;CL:0000559!3.22e-27!63;CL:0000557!1.12e-26!71;CL:0002057!8.81e-26!42;CL:0002009!9.60e-26!65;CL:0000860!5.79e-23!45;CL:0000037!1.99e-13!172;CL:0000566!1.99e-13!172;CL:0002032!1.14e-12!165;CL:0000837!1.14e-12!165;CL:0000988!2.63e-11!182;CL:0000738!9.57e-09!140;CL:0002031!1.07e-08!124;CL:0002087!1.79e-08!119;CL:0000134!2.86e-08!358;CL:0002320!1.70e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.92e-56;39!CL:0000234;1.92e-56;39!CL:0000860;1.32e-55;33!CL:0002057;1.32e-55;33!CL:0000576;7.63e-37;48!CL:0000766;7.97e-29;69!CL:0000763;2.24e-18;100!CL:0000235;5.24e-14;6!CL:0000738;1.02e-08;136!CL:0002087;2.04e-08;104!CL:0002619;5.48e-08;3!CL:0000135;6.98e-07;3!CL:0000388;6.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,8.35e-69,59;CL:0000576,8.35e-69,59;CL:0000040,8.35e-69,59;CL:0000559,8.35e-69,59;CL:0000766,1.67e-67,72;CL:0000473,6.89e-67,48;CL:0000234,6.89e-67,48;CL:0002009,4.09e-66,61;CL:0000839,6.09e-66,66;CL:0000557,6.99e-62,67;CL:0000763,1.48e-58,108;CL:0000049,1.48e-58,108;CL:0000860,1.81e-54,42;CL:0002057,1.81e-54,42;CL:0000037,2.95e-34,168;CL:0002032,1.02e-33,161;CL:0000837,1.02e-33,161;CL:0000988,1.22e-31,177;CL:0002087,4.13e-30,115;CL:0000738,4.46e-30,136;CL:0002031,5.94e-30,120;CL:0000134,1.01e-15,354;CL:0002320,4.72e-15,361;CL:0000235,5.69e-14,6;CL:0000034,3.97e-13,441;CL:0000219,1.05e-12,386;CL:0000048,3.50e-12,427;CL:0000723,9.55e-12,433;CL:0002619,5.37e-08,3;CL:0000135,7.52e-07,3;CL:0000388,7.52e-07,3;CL:0000767,9.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.26e-41;42!CL:0000049;1.80e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-28!102;UBERON:0003061!2.19e-28!102;UBERON:0002371!9.92e-26!80;UBERON:0002193!5.01e-25!112;UBERON:0001474!2.83e-23!86;UBERON:0004765!1.66e-21!101;UBERON:0001434!1.66e-21!101;UBERON:0002405!7.77e-17!115;UBERON:0002204!2.50e-15!167;UBERON:0003081!1.82e-14!216;UBERON:0007023!6.36e-14!115;UBERON:0002384!8.67e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;6.98e-07;3!UBERON:0000043;6.98e-07;3!UBERON:0007845;6.98e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.32e-58,76;UBERON:0002390,1.05e-53,98;UBERON:0003061,1.05e-53,98;UBERON:0001474,8.55e-53,82;UBERON:0002193,2.83e-47,108;UBERON:0004765,7.94e-47,90;UBERON:0002405,7.48e-45,93;UBERON:0001434,1.37e-42,100;UBERON:0002204,9.94e-28,167;UBERON:0003081,1.18e-22,203;UBERON:0002384,3.85e-14,371;UBERON:0000926,4.56e-12,315;UBERON:0004120,4.56e-12,315;UBERON:0006603,4.56e-12,315;UBERON:0007846,7.52e-07,3;UBERON:0000043,7.52e-07,3;UBERON:0007845,7.52e-07,3 | |||
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| |||
|short_description=p9@LHFPL2 | |||
}} |
Revision as of 16:32, 13 September 2013
Short description: | p9@LHFPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_LHFPL2_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | -151bp_to_AK125227_5end |
EntrezGene: | LHFPL2 |
HGNC: | 6588 |
UniProt: | Q6ZUX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.32e-58 | 76 |
hematopoietic system | 1.05e-53 | 98 |
blood island | 1.05e-53 | 98 |
bone element | 8.55e-53 | 82 |
hemolymphoid system | 2.83e-47 | 108 |
skeletal element | 7.94e-47 | 90 |
immune system | 7.48e-45 | 93 |
skeletal system | 1.37e-42 | 100 |
musculoskeletal system | 9.94e-28 | 167 |
lateral plate mesoderm | 1.18e-22 | 203 |
connective tissue | 3.85e-14 | 371 |
mesoderm | 4.56e-12 | 315 |
mesoderm-derived structure | 4.56e-12 | 315 |
presumptive mesoderm | 4.56e-12 | 315 |
dense regular connective tissue | 7.52e-07 | 3 |
tendon | 7.52e-07 | 3 |
regular connective tissue | 7.52e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.