FFCP PHASE1:Hg19::chr5:63461151..63461183,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=285671|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27752|TSSclassifier=N|UniProt=Q86T96|association_with_transcript=-487bp_to_ENST00000296615,ENST00000381081,NM_001113561,NM_178532,uc003jth.3,uc003jti.2,uc010iws.2_5end|coexpression_cluster_id=C189|description=CAGE_peak_4_at_RNF180_5end|id=chr5:63461151..63461183,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000945;1.79e-12;24!CL:0002253;1.57e-10;2|ontology_enrichment_celltype_v019_2=CL:0000945,1.76e-12,24;CL:0000826,1.76e-12,24;CL:0002253,1.57e-10,2|ontology_enrichment_development_v019=UBERON:0005795;3.83e-08;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.14e-39!115;UBERON:0001049!2.31e-31!57;UBERON:0005068!2.31e-31!57;UBERON:0006241!2.31e-31!57;UBERON:0007135!2.31e-31!57;UBERON:0005743!2.30e-26!86;UBERON:0001017!2.33e-26!82;UBERON:0002616!6.87e-26!59;UBERON:0000955!9.87e-24!69;UBERON:0006238!9.87e-24!69;UBERON:0003075!1.62e-23!86;UBERON:0007284!1.62e-23!86;UBERON:0002780!2.98e-23!41;UBERON:0001890!2.98e-23!41;UBERON:0006240!2.98e-23!41;UBERON:0000073!6.70e-23!94;UBERON:0001016!6.70e-23!94;UBERON:0003080!1.49e-22!42;UBERON:0002346!4.98e-22!90;UBERON:0001869!1.29e-20!32;UBERON:0002020!3.42e-19!34;UBERON:0003528!3.42e-19!34;UBERON:0001893!4.01e-19!34;UBERON:0002791!7.18e-18!33;UBERON:0003056!1.68e-16!61;UBERON:0000153!3.43e-15!129;UBERON:0007811!3.43e-15!129;UBERON:0002619!1.11e-14!22;UBERON:0000956!1.52e-14!25;UBERON:0000203!1.52e-14!25;UBERON:0000033!2.80e-14!123;UBERON:0001950!4.16e-14!20;UBERON:0004121!1.55e-11!169;UBERON:0000924!4.94e-11!173;UBERON:0006601!4.94e-11!173;UBERON:0003076!6.71e-10!15;UBERON:0003057!6.71e-10!15;UBERON:0000369!9.29e-10!4;UBERON:0002435!9.29e-10!4;UBERON:0000204!9.29e-10!4;UBERON:0010082!9.29e-10!4;UBERON:0000025!5.01e-09!194;UBERON:0004111!8.67e-09!241;UBERON:0006947!2.70e-08!3;UBERON:0004054!2.70e-08!3;UBERON:0000477!2.96e-08!286;UBERON:0000483!3.29e-08!309;UBERON:0000119!5.25e-08!312;UBERON:0005383!5.33e-08!3;UBERON:0005382!5.33e-08!3;UBERON:0000200!5.57e-08!6;UBERON:0004733!1.04e-07!12;UBERON:0002028!1.04e-07!12;UBERON:0007277!1.04e-07!12;UBERON:0000475!1.12e-07!365;UBERON:0000481!1.97e-07!347;UBERON:0001872!4.11e-07!5;UBERON:0001896!4.46e-07!3;UBERON:0005290!4.46e-07!3;UBERON:0010096!4.46e-07!3;UBERON:0004732!4.89e-07!13|ontology_enrichment_uberon_v019=UBERON:0006834;1.71e-19;1!UBERON:0001000;2.97e-19;1!UBERON:0005352;2.97e-19;1!UBERON:0005795;4.69e-19;1!UBERON:0000007;3.27e-10;2!UBERON:0004175;2.51e-08;21!UBERON:0006947;2.71e-07;3!UBERON:0004054;2.71e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.30e-19,1;UBERON:0001000,3.25e-19,1;UBERON:0005352,3.25e-19,1;UBERON:0000007,3.58e-10,2;UBERON:0005795,5.66e-08,22;UBERON:0006947,2.79e-07,3;UBERON:0004054,2.79e-07,3;UBERON:0004175,4.23e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,2.44522898393444,3.20192298854788,3.30585281517453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.398495976502139,0,0,0,22.8937738157589,0,0,0,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0,0,1.84680620409113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,6.92443647174692,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,2.36750641709634,0,0.91821828489147,0.063186579628488,0.150323419414493,0.829505531177977,0,0,0,0,0,0,0.694238953340524,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0.303747783290123,0,0.551639951094387,0.524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.640724475406168,0.628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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=285671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27752 | |||
|TSSclassifier=N | |||
|UniProt=Q86T96 | |||
|association_with_transcript=-487bp_to_ENST00000296615,ENST00000381081,NM_001113561,NM_178532,uc003jth.3,uc003jti.2,uc010iws.2_5end | |||
|coexpression_cluster_id=C189 | |||
|description=CAGE_peak_4_at_RNF180_5end | |||
|id=chr5:63461151..63461183,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.79e-12;24!CL:0002253;1.57e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.76e-12,24;CL:0000826,1.76e-12,24;CL:0002253,1.57e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.83e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-39!115;UBERON:0001049!2.31e-31!57;UBERON:0005068!2.31e-31!57;UBERON:0006241!2.31e-31!57;UBERON:0007135!2.31e-31!57;UBERON:0005743!2.30e-26!86;UBERON:0001017!2.33e-26!82;UBERON:0002616!6.87e-26!59;UBERON:0000955!9.87e-24!69;UBERON:0006238!9.87e-24!69;UBERON:0003075!1.62e-23!86;UBERON:0007284!1.62e-23!86;UBERON:0002780!2.98e-23!41;UBERON:0001890!2.98e-23!41;UBERON:0006240!2.98e-23!41;UBERON:0000073!6.70e-23!94;UBERON:0001016!6.70e-23!94;UBERON:0003080!1.49e-22!42;UBERON:0002346!4.98e-22!90;UBERON:0001869!1.29e-20!32;UBERON:0002020!3.42e-19!34;UBERON:0003528!3.42e-19!34;UBERON:0001893!4.01e-19!34;UBERON:0002791!7.18e-18!33;UBERON:0003056!1.68e-16!61;UBERON:0000153!3.43e-15!129;UBERON:0007811!3.43e-15!129;UBERON:0002619!1.11e-14!22;UBERON:0000956!1.52e-14!25;UBERON:0000203!1.52e-14!25;UBERON:0000033!2.80e-14!123;UBERON:0001950!4.16e-14!20;UBERON:0004121!1.55e-11!169;UBERON:0000924!4.94e-11!173;UBERON:0006601!4.94e-11!173;UBERON:0003076!6.71e-10!15;UBERON:0003057!6.71e-10!15;UBERON:0000369!9.29e-10!4;UBERON:0002435!9.29e-10!4;UBERON:0000204!9.29e-10!4;UBERON:0010082!9.29e-10!4;UBERON:0000025!5.01e-09!194;UBERON:0004111!8.67e-09!241;UBERON:0006947!2.70e-08!3;UBERON:0004054!2.70e-08!3;UBERON:0000477!2.96e-08!286;UBERON:0000483!3.29e-08!309;UBERON:0000119!5.25e-08!312;UBERON:0005383!5.33e-08!3;UBERON:0005382!5.33e-08!3;UBERON:0000200!5.57e-08!6;UBERON:0004733!1.04e-07!12;UBERON:0002028!1.04e-07!12;UBERON:0007277!1.04e-07!12;UBERON:0000475!1.12e-07!365;UBERON:0000481!1.97e-07!347;UBERON:0001872!4.11e-07!5;UBERON:0001896!4.46e-07!3;UBERON:0005290!4.46e-07!3;UBERON:0010096!4.46e-07!3;UBERON:0004732!4.89e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.71e-19;1!UBERON:0001000;2.97e-19;1!UBERON:0005352;2.97e-19;1!UBERON:0005795;4.69e-19;1!UBERON:0000007;3.27e-10;2!UBERON:0004175;2.51e-08;21!UBERON:0006947;2.71e-07;3!UBERON:0004054;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.30e-19,1;UBERON:0001000,3.25e-19,1;UBERON:0005352,3.25e-19,1;UBERON:0000007,3.58e-10,2;UBERON:0005795,5.66e-08,22;UBERON:0006947,2.79e-07,3;UBERON:0004054,2.79e-07,3;UBERON:0004175,4.23e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,2.44522898393444,3.20192298854788,3.30585281517453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.398495976502139,0,0,0,22.8937738157589,0,0,0,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0,0,1.84680620409113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,6.92443647174692,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,2.36750641709634,0,0.91821828489147,0.063186579628488,0.150323419414493,0.829505531177977,0,0,0,0,0,0,0.694238953340524,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0.303747783290123,0,0.551639951094387,0.524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.640724475406168,0.628817220398664,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0.546974809018219,0,0,0,0,0,0.336283722218824,1.21393120847326,0.455324382702595,0,0,0,0.0679697329768317,0.131545547125698,0,0.222462803784138,0.706437835654626,0.942693539496011,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.378893491091197,0,0,0,0.213233981900981,0.23806443146374,0,0,0,3.18235791390825,0.404234377916439,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,3.42276043712026,1.62758471326295,0,0,0 | |||
|short_description=p4@RNF180 | |||
}} |
Revision as of 16:05, 13 September 2013
Short description: | p4@RNF180 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RNF180_5end |
Coexpression cluster: | C189_b_splenic_tonsil_CD19_lymph_appendix_spleen |
Association with transcript: | -487bp_to_ENST00000296615, ENST00000381081, NM_001113561, NM_178532, uc003jth.3, uc003jti.2, uc010iws.2_5end |
EntrezGene: | RNF180 |
HGNC: | 27752 |
UniProt: | Q86T96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.76e-12 | 24 |
pro-B cell | 1.76e-12 | 24 |
epithelial cell of large intestine | 1.57e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.30e-19 | 1 |
vas deferens | 3.25e-19 | 1 |
spermatic cord | 3.25e-19 | 1 |
pituitary gland | 3.58e-10 | 2 |
embryonic uterus | 5.66e-08 | 22 |
male genital duct | 2.79e-07 | 3 |
internal male genitalia | 2.79e-07 | 3 |
internal genitalia | 4.23e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.