FFCP PHASE1:Hg19::chr4:186577832..186577907,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8470|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24098|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000466289,ENST00000476311,ENST00000485380,ENST00000487836,ENST00000490562,ENST00000492810,ENST00000495932_5end|coexpression_cluster_id=C48|description=CAGE_peak_1_at_SORBS2_5end|id=chr4:186577832..186577907,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.82e-09;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.76e-56!115;UBERON:0005743!9.57e-26!86;UBERON:0002616!3.37e-25!59;UBERON:0001049!5.17e-25!57;UBERON:0005068!5.17e-25!57;UBERON:0006241!5.17e-25!57;UBERON:0007135!5.17e-25!57;UBERON:0001017!2.34e-24!82;UBERON:0000955!6.63e-23!69;UBERON:0006238!6.63e-23!69;UBERON:0003075!9.17e-23!86;UBERON:0007284!9.17e-23!86;UBERON:0000073!1.12e-22!94;UBERON:0001016!1.12e-22!94;UBERON:0002346!1.47e-20!90;UBERON:0000153!3.05e-20!129;UBERON:0007811!3.05e-20!129;UBERON:0003080!8.86e-20!42;UBERON:0000033!1.49e-19!123;UBERON:0002780!4.39e-19!41;UBERON:0001890!4.39e-19!41;UBERON:0006240!4.39e-19!41;UBERON:0004121!1.13e-16!169;UBERON:0003056!1.32e-15!61;UBERON:0000924!1.63e-15!173;UBERON:0006601!1.63e-15!173;UBERON:0001893!1.99e-15!34;UBERON:0002020!3.58e-15!34;UBERON:0003528!3.58e-15!34;UBERON:0002791!6.96e-15!33;UBERON:0000477!1.20e-14!286;UBERON:0001869!2.18e-14!32;UBERON:0000475!1.77e-13!365;UBERON:0000481!3.80e-13!347;UBERON:0004111!8.67e-12!241;UBERON:0000956!1.91e-11!25;UBERON:0000203!1.91e-11!25;UBERON:0002619!4.86e-11!22;UBERON:0000468!1.52e-10!659;UBERON:0001950!4.05e-10!20;UBERON:0000025!1.04e-09!194;UBERON:0000483!2.45e-09!309;UBERON:0000119!4.14e-09!312;UBERON:0000062!3.47e-08!511;UBERON:0000922!2.59e-07!612;UBERON:0000467!2.96e-07!625;UBERON:0000480!3.84e-07!626;UBERON:0004457!9.78e-07!12;UBERON:0000042!9.78e-07!12|ontology_enrichment_uberon_v019=UBERON:0007023;5.02e-19;114!UBERON:0002780;1.47e-14;41!UBERON:0001890;1.47e-14;41!UBERON:0001893;2.20e-13;34!UBERON:0000073;4.23e-13;53!UBERON:0002616;4.23e-13;53!UBERON:0003528;7.70e-13;34!UBERON:0002020;7.70e-13;34!UBERON:0001869;9.52e-13;32!UBERON:0002791;1.04e-12;32!UBERON:0002619;1.83e-12;22!UBERON:0001950;2.91e-11;20!UBERON:0000956;2.58e-10;25!UBERON:0000203;2.58e-10;25!UBERON:0001017;4.82e-10;75!UBERON:0000955;3.32e-09;68!UBERON:0011216;1.48e-07;132!UBERON:0001016;1.59e-07;83!UBERON:0004457;5.43e-07;9!UBERON:0000042;5.43e-07;9!UBERON:0001044;9.68e-07;6!UBERON:0003293;9.68e-07;6!UBERON:0003294;9.68e-07;6!UBERON:0010047;9.68e-07;6!UBERON:0003408;9.68e-07;6!UBERON:0000167;9.68e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.37e-75,114;UBERON:0001049,1.01e-24,56;UBERON:0005068,1.01e-24,56;UBERON:0006241,1.01e-24,56;UBERON:0007135,1.01e-24,56;UBERON:0000073,1.03e-22,53;UBERON:0002616,1.03e-22,53;UBERON:0000955,9.21e-21,68;UBERON:0006238,9.21e-21,68;UBERON:0001017,2.82e-20,81;UBERON:0002780,3.20e-20,41;UBERON:0001890,3.20e-20,41;UBERON:0003080,3.20e-20,41;UBERON:0006240,3.20e-20,41;UBERON:0003075,3.71e-19,82;UBERON:0007284,3.71e-19,82;UBERON:0001016,1.84e-18,89;UBERON:0011216,2.36e-18,223;UBERON:0010314,1.43e-17,132;UBERON:0002346,1.71e-17,86;UBERON:0001893,1.71e-15,34;UBERON:0003528,3.39e-15,34;UBERON:0002020,3.39e-15,34;UBERON:0001869,3.66e-14,32;UBERON:0002791,4.18e-14,32;UBERON:0010371,2.69e-13,104;UBERON:0003056,6.86e-13,61;UBERON:0004121,1.07e-12,171;UBERON:0000924,1.07e-12,171;UBERON:0006601,1.07e-12,171;UBERON:0002619,1.62e-12,22;UBERON:0001950,2.70e-11,20;UBERON:0000956,2.33e-10,25;UBERON:0000203,2.33e-10,25;UBERON:0004111,4.64e-10,240;UBERON:0000025,3.94e-08,192;UBERON:0004457,9.43e-08,12;UBERON:0000042,9.43e-08,12;UBERON:0001044,9.84e-07,6;UBERON:0003293,9.84e-07,6;UBERON:0003294,9.84e-07,6;UBERON:0010047,9.84e-07,6;UBERON:0000167,9.84e-07,6|phase1_expression=41.4226704736869,17.1280419112787,65.5437979046266,36.0263874071269,100.119285151712,65.4253893075277,2.53299878168311,0,0,0.245733936501509,0,0,0,1.36142988256051,2.31978163009541,0.672325146451775,0,0,0,0.61560529038394,0.204000691244253,0.313454721478088,0.286235987131057,0.547497700291537,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.65939452896706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70801429346238,16.9876401620746,28.0749229956098,30.1280759438513,54.8747303465259,22.8718389042239,0.189069634328136,0,0.087834785693126,16.1104262862187,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0.516833518338658,0,0.33472061276467,0,0,0,0,0,0.446498641420399,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,0.993943903390637,0.506522046658319,1.72131935057184,0.286836620748814,0.709336764396714,3.36406560085384,2.1349799145941,3.700013226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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8470 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000466289,ENST00000476311,ENST00000485380,ENST00000487836,ENST00000490562,ENST00000492810,ENST00000495932_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_1_at_SORBS2_5end | |||
|id=chr4:186577832..186577907,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.82e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.76e-56!115;UBERON:0005743!9.57e-26!86;UBERON:0002616!3.37e-25!59;UBERON:0001049!5.17e-25!57;UBERON:0005068!5.17e-25!57;UBERON:0006241!5.17e-25!57;UBERON:0007135!5.17e-25!57;UBERON:0001017!2.34e-24!82;UBERON:0000955!6.63e-23!69;UBERON:0006238!6.63e-23!69;UBERON:0003075!9.17e-23!86;UBERON:0007284!9.17e-23!86;UBERON:0000073!1.12e-22!94;UBERON:0001016!1.12e-22!94;UBERON:0002346!1.47e-20!90;UBERON:0000153!3.05e-20!129;UBERON:0007811!3.05e-20!129;UBERON:0003080!8.86e-20!42;UBERON:0000033!1.49e-19!123;UBERON:0002780!4.39e-19!41;UBERON:0001890!4.39e-19!41;UBERON:0006240!4.39e-19!41;UBERON:0004121!1.13e-16!169;UBERON:0003056!1.32e-15!61;UBERON:0000924!1.63e-15!173;UBERON:0006601!1.63e-15!173;UBERON:0001893!1.99e-15!34;UBERON:0002020!3.58e-15!34;UBERON:0003528!3.58e-15!34;UBERON:0002791!6.96e-15!33;UBERON:0000477!1.20e-14!286;UBERON:0001869!2.18e-14!32;UBERON:0000475!1.77e-13!365;UBERON:0000481!3.80e-13!347;UBERON:0004111!8.67e-12!241;UBERON:0000956!1.91e-11!25;UBERON:0000203!1.91e-11!25;UBERON:0002619!4.86e-11!22;UBERON:0000468!1.52e-10!659;UBERON:0001950!4.05e-10!20;UBERON:0000025!1.04e-09!194;UBERON:0000483!2.45e-09!309;UBERON:0000119!4.14e-09!312;UBERON:0000062!3.47e-08!511;UBERON:0000922!2.59e-07!612;UBERON:0000467!2.96e-07!625;UBERON:0000480!3.84e-07!626;UBERON:0004457!9.78e-07!12;UBERON:0000042!9.78e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.02e-19;114!UBERON:0002780;1.47e-14;41!UBERON:0001890;1.47e-14;41!UBERON:0001893;2.20e-13;34!UBERON:0000073;4.23e-13;53!UBERON:0002616;4.23e-13;53!UBERON:0003528;7.70e-13;34!UBERON:0002020;7.70e-13;34!UBERON:0001869;9.52e-13;32!UBERON:0002791;1.04e-12;32!UBERON:0002619;1.83e-12;22!UBERON:0001950;2.91e-11;20!UBERON:0000956;2.58e-10;25!UBERON:0000203;2.58e-10;25!UBERON:0001017;4.82e-10;75!UBERON:0000955;3.32e-09;68!UBERON:0011216;1.48e-07;132!UBERON:0001016;1.59e-07;83!UBERON:0004457;5.43e-07;9!UBERON:0000042;5.43e-07;9!UBERON:0001044;9.68e-07;6!UBERON:0003293;9.68e-07;6!UBERON:0003294;9.68e-07;6!UBERON:0010047;9.68e-07;6!UBERON:0003408;9.68e-07;6!UBERON:0000167;9.68e-07;6 | |||
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| |||
|short_description=p1@SORBS2 | |||
}} |
Revision as of 10:20, 13 September 2013
Short description: | p1@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SORBS2_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_ENST00000466289, ENST00000476311, ENST00000485380, ENST00000487836, ENST00000490562, ENST00000492810, ENST00000495932_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.