FFCP PHASE1:Hg19::chr4:103498478..103498489,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4790|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7794|TSSclassifier=N|UniProt=|association_with_transcript=-381bp_to_uc011cer.1_5end|coexpression_cluster_id=C426|description=CAGE_peak_12_at_NFKB1_5end|id=chr4:103498478..103498489,+|ontology_enrichment_celltype=CL:0000738!2.80e-39!140;CL:0002087!4.66e-32!119;CL:0002031!1.83e-31!124;CL:0000037!4.56e-29!172;CL:0000566!4.56e-29!172;CL:0002032!1.09e-27!165;CL:0000837!1.09e-27!165;CL:0000988!2.35e-27!182;CL:0002057!1.75e-26!42;CL:0000860!3.11e-26!45;CL:0000766!1.59e-24!76;CL:0000557!1.40e-23!71;CL:0002009!9.90e-23!65;CL:0000839!1.88e-21!70;CL:0002194!3.34e-21!63;CL:0000576!3.34e-21!63;CL:0000040!3.34e-21!63;CL:0000559!3.34e-21!63;CL:0000763!1.03e-17!112;CL:0000049!1.03e-17!112;CL:0000134!1.83e-11!358;CL:0002320!1.75e-10!365;CL:0000542!1.82e-09!53;CL:0000051!1.82e-09!53;CL:0000838!4.76e-09!52;CL:0000219!1.30e-08!390|ontology_enrichment_celltype_v019=CL:0000860;2.61e-56;33!CL:0002057;2.61e-56;33!CL:0000473;3.78e-43;39!CL:0000234;3.78e-43;39!CL:0000576;4.47e-30;48!CL:0000766;1.78e-25;69!CL:0002087;1.46e-17;104!CL:0000738;1.33e-15;136!CL:0000775;2.57e-11;3!CL:0000623;1.68e-10;3!CL:0000453;1.78e-10;5!CL:0000763;3.41e-10;100!CL:0000451;1.04e-09;10!CL:0000988;4.98e-09;177!CL:0000990;1.36e-08;8!CL:0001014;1.44e-07;2!CL:0001016;1.44e-07;2!CL:0000219;2.23e-07;193!CL:0000094;2.89e-07;8|ontology_enrichment_celltype_v019_2=CL:0000738,8.66e-67,136;CL:0000860,6.88e-59,42;CL:0002057,6.88e-59,42;CL:0000473,5.58e-58,48;CL:0000234,5.58e-58,48;CL:0000766,9.63e-53,72;CL:0002009,1.25e-52,61;CL:0002087,4.43e-52,115;CL:0002031,7.45e-52,120;CL:0000037,8.72e-52,168;CL:0000557,3.78e-50,67;CL:0000988,1.55e-48,177;CL:0002032,5.08e-48,161;CL:0000837,5.08e-48,161;CL:0002194,7.49e-48,59;CL:0000576,7.49e-48,59;CL:0000040,7.49e-48,59;CL:0000559,7.49e-48,59;CL:0000839,9.16e-45,66;CL:0000763,9.26e-41,108;CL:0000049,9.26e-41,108;CL:0000134,5.20e-20,354;CL:0002320,2.24e-19,361;CL:0000219,3.88e-17,386;CL:0000048,2.12e-14,427;CL:0000723,5.06e-14,433;CL:0000034,1.56e-13,441;CL:0000775,2.53e-11,3;CL:0000623,1.22e-10,3;CL:0000825,1.22e-10,3;CL:0000453,1.59e-10,5;CL:0000451,7.34e-10,10;CL:0000990,1.09e-08,8;CL:0000838,5.83e-08,52;CL:0000542,9.31e-08,53;CL:0000051,9.31e-08,53;CL:0001014,1.41e-07,2;CL:0001016,1.41e-07,2;CL:0000094,2.80e-07,8|ontology_enrichment_development_v019=CL:0002057;9.00e-45;42!CL:0000049;6.70e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.23e-19!112;UBERON:0002390!1.54e-19!102;UBERON:0003061!1.54e-19!102;UBERON:0002371!1.59e-19!80;UBERON:0001474!1.28e-18!86;UBERON:0002405!9.44e-16!115;UBERON:0004765!3.69e-14!101;UBERON:0001434!3.69e-14!101;UBERON:0002384!7.92e-10!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.31e-43,76;UBERON:0001474,2.04e-39,82;UBERON:0002390,6.69e-36,98;UBERON:0003061,6.69e-36,98;UBERON:0004765,3.81e-35,90;UBERON:0002405,9.89e-34,93;UBERON:0002193,9.92e-32,108;UBERON:0001434,9.24e-31,100;UBERON:0002384,1.65e-18,371;UBERON:0002204,6.04e-15,167;UBERON:0003081,1.22e-12,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0.157421562627358,0,0,0.309632246632152,0,0,0,0.0774672005803016,0.142169232487422,0,1.66198622559563,5.21415563422368,4.99125002646459,0,0,0,0.290796477559129,1.51150377475524,0.485168122375632,3.25400651667958,2.05583944010913,4.33588919253145,2.58923153089935,2.0492856522328,2.12834006899727,3.44745680736619,2.5819387343353,1.35426486594342,1.50593871634084,2.45615535052061,2.24723484445085,6.12167784741805,4.8139354061414,12.1474053901818,0,1.39624560335142,0.426224750532694,12.7692064996577,7.37600792098482,9.34233373493363,1.50749199154046,5.21482918420201,1.95469960234605,6.05399502633369,4.05105399586321,3.79754864929061,0,0.637812899895131,0.209658645508376,0.44931452458598,0.300353785683013,0,0,0.19891667719909,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0,3.41527781465669,9.98303221930596,4.96955196562797,0,0,0,2.9506465517075,10.6112905942274,2.67281948699362,0,0,0,0,0,0.294605907474837,0.221533894583621,0.541607727530031,0.512365278902701,0.520237390239513,0.493313713811028,0,0.869409257205157,0.14828656316206,0.267540828089713,1.04535523804977,0.453237370790265,0.383220493601921,0.68725489096526,0.506039384039006,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0.821127996921047,3.02410114837099,6.15112450302067,4.05508330871837,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.378139268656271,0.221729397462564,0.263504357079378,0.130979075497713,0.364295288292542,0,0,0,0.398873881556595,1.90792499444274,1.71598473234038,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,7.75560528296651,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7794 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-381bp_to_uc011cer.1_5end | |||
|coexpression_cluster_id=C426 | |||
|description=CAGE_peak_12_at_NFKB1_5end | |||
|id=chr4:103498478..103498489,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.80e-39!140;CL:0002087!4.66e-32!119;CL:0002031!1.83e-31!124;CL:0000037!4.56e-29!172;CL:0000566!4.56e-29!172;CL:0002032!1.09e-27!165;CL:0000837!1.09e-27!165;CL:0000988!2.35e-27!182;CL:0002057!1.75e-26!42;CL:0000860!3.11e-26!45;CL:0000766!1.59e-24!76;CL:0000557!1.40e-23!71;CL:0002009!9.90e-23!65;CL:0000839!1.88e-21!70;CL:0002194!3.34e-21!63;CL:0000576!3.34e-21!63;CL:0000040!3.34e-21!63;CL:0000559!3.34e-21!63;CL:0000763!1.03e-17!112;CL:0000049!1.03e-17!112;CL:0000134!1.83e-11!358;CL:0002320!1.75e-10!365;CL:0000542!1.82e-09!53;CL:0000051!1.82e-09!53;CL:0000838!4.76e-09!52;CL:0000219!1.30e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.61e-56;33!CL:0002057;2.61e-56;33!CL:0000473;3.78e-43;39!CL:0000234;3.78e-43;39!CL:0000576;4.47e-30;48!CL:0000766;1.78e-25;69!CL:0002087;1.46e-17;104!CL:0000738;1.33e-15;136!CL:0000775;2.57e-11;3!CL:0000623;1.68e-10;3!CL:0000453;1.78e-10;5!CL:0000763;3.41e-10;100!CL:0000451;1.04e-09;10!CL:0000988;4.98e-09;177!CL:0000990;1.36e-08;8!CL:0001014;1.44e-07;2!CL:0001016;1.44e-07;2!CL:0000219;2.23e-07;193!CL:0000094;2.89e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.66e-67,136;CL:0000860,6.88e-59,42;CL:0002057,6.88e-59,42;CL:0000473,5.58e-58,48;CL:0000234,5.58e-58,48;CL:0000766,9.63e-53,72;CL:0002009,1.25e-52,61;CL:0002087,4.43e-52,115;CL:0002031,7.45e-52,120;CL:0000037,8.72e-52,168;CL:0000557,3.78e-50,67;CL:0000988,1.55e-48,177;CL:0002032,5.08e-48,161;CL:0000837,5.08e-48,161;CL:0002194,7.49e-48,59;CL:0000576,7.49e-48,59;CL:0000040,7.49e-48,59;CL:0000559,7.49e-48,59;CL:0000839,9.16e-45,66;CL:0000763,9.26e-41,108;CL:0000049,9.26e-41,108;CL:0000134,5.20e-20,354;CL:0002320,2.24e-19,361;CL:0000219,3.88e-17,386;CL:0000048,2.12e-14,427;CL:0000723,5.06e-14,433;CL:0000034,1.56e-13,441;CL:0000775,2.53e-11,3;CL:0000623,1.22e-10,3;CL:0000825,1.22e-10,3;CL:0000453,1.59e-10,5;CL:0000451,7.34e-10,10;CL:0000990,1.09e-08,8;CL:0000838,5.83e-08,52;CL:0000542,9.31e-08,53;CL:0000051,9.31e-08,53;CL:0001014,1.41e-07,2;CL:0001016,1.41e-07,2;CL:0000094,2.80e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.00e-45;42!CL:0000049;6.70e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.23e-19!112;UBERON:0002390!1.54e-19!102;UBERON:0003061!1.54e-19!102;UBERON:0002371!1.59e-19!80;UBERON:0001474!1.28e-18!86;UBERON:0002405!9.44e-16!115;UBERON:0004765!3.69e-14!101;UBERON:0001434!3.69e-14!101;UBERON:0002384!7.92e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.31e-43,76;UBERON:0001474,2.04e-39,82;UBERON:0002390,6.69e-36,98;UBERON:0003061,6.69e-36,98;UBERON:0004765,3.81e-35,90;UBERON:0002405,9.89e-34,93;UBERON:0002193,9.92e-32,108;UBERON:0001434,9.24e-31,100;UBERON:0002384,1.65e-18,371;UBERON:0002204,6.04e-15,167;UBERON:0003081,1.22e-12,203 | |||
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| |||
|short_description=p12@NFKB1 | |||
}} |
Revision as of 01:51, 13 September 2013
Short description: | p12@NFKB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_NFKB1_5end |
Coexpression cluster: | C426_CD4_CD14_Neutrophils_CD8_Natural_Mast_Eosinophils |
Association with transcript: | -381bp_to_uc011cer.1_5end |
EntrezGene: | NFKB1 |
HGNC: | 7794 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.31e-43 | 76 |
bone element | 2.04e-39 | 82 |
hematopoietic system | 6.69e-36 | 98 |
blood island | 6.69e-36 | 98 |
skeletal element | 3.81e-35 | 90 |
immune system | 9.89e-34 | 93 |
hemolymphoid system | 9.92e-32 | 108 |
skeletal system | 9.24e-31 | 100 |
connective tissue | 1.65e-18 | 371 |
musculoskeletal system | 6.04e-15 | 167 |
lateral plate mesoderm | 1.22e-12 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.