FFCP PHASE1:Hg19::chr4:100871681..100871699,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=1bp_to_ENST00000501976_5end|coexpression_cluster_id=C1356|description=CAGE_peak_1_at_ENST00000501976_5end|id=chr4:100871681..100871699,+|ontology_enrichment_celltype=CL:0000037!3.93e-28!172;CL:0000566!3.93e-28!172;CL:0000988!3.43e-27!182;CL:0002032!1.10e-25!165;CL:0000837!1.10e-25!165;CL:0000738!1.37e-25!140;CL:0002031!6.32e-20!124;CL:0002087!1.96e-19!119;CL:0000860!7.47e-18!45;CL:0002057!3.10e-17!42;CL:0000763!5.45e-16!112;CL:0000049!5.45e-16!112;CL:0000766!1.43e-12!76;CL:0000557!6.72e-11!71;CL:0000839!1.30e-10!70;CL:0002009!1.33e-10!65;CL:0002194!8.82e-10!63;CL:0000576!8.82e-10!63;CL:0000040!8.82e-10!63;CL:0000559!8.82e-10!63;CL:0000542!2.35e-09!53;CL:0000051!2.35e-09!53;CL:0000838!6.22e-09!52|ontology_enrichment_celltype_v019=CL:0000860;7.92e-33;33!CL:0002057;7.92e-33;33!CL:0000473;1.61e-21;39!CL:0000234;1.61e-21;39!CL:0000576;5.76e-15;48!CL:0002087;2.68e-11;104!CL:0000766;3.85e-10;69!CL:0000084;1.09e-09;25!CL:0000738;7.65e-09;136!CL:0000542;9.94e-09;53!CL:0000988;4.80e-08;177!CL:0000763;2.09e-07;100|ontology_enrichment_celltype_v019_2=CL:0000988,4.55e-39,177;CL:0000738,8.44e-39,136;CL:0000037,1.72e-38,168;CL:0002032,8.98e-37,161;CL:0000837,8.98e-37,161;CL:0002031,6.88e-32,120;CL:0002087,2.52e-31,115;CL:0000860,5.94e-29,42;CL:0002057,5.94e-29,42;CL:0000473,7.76e-24,48;CL:0000234,7.76e-24,48;CL:0000763,7.36e-22,108;CL:0000049,7.36e-22,108;CL:0000766,9.76e-21,72;CL:0000557,3.65e-19,67;CL:0002009,1.95e-18,61;CL:0000839,4.29e-17,66;CL:0002194,8.70e-17,59;CL:0000576,8.70e-17,59;CL:0000040,8.70e-17,59;CL:0000559,8.70e-17,59;CL:0000542,9.75e-14,53;CL:0000051,9.75e-14,53;CL:0000838,5.87e-13,52;CL:0000084,1.20e-09,25;CL:0000827,1.20e-09,25;CL:0000134,5.42e-09,354;CL:0000219,1.30e-08,386;CL:0002320,2.25e-08,361|ontology_enrichment_development_v019=CL:0002057;1.34e-21;42!CL:0000051;9.94e-09;53!CL:0000049;5.89e-07;108|ontology_enrichment_disease=DOID:14566!1.10e-10!239;DOID:162!3.21e-10!235;DOID:2531!5.62e-08!51;DOID:0060083!5.62e-08!51|ontology_enrichment_disease_v019=DOID:0060058;3.68e-09;10|ontology_enrichment_disease_v019_2=DOID:2531,6.63e-10,51;DOID:0060083,6.63e-10,51;DOID:0060058,2.51e-09,10|ontology_enrichment_uberon=UBERON:0002390!4.32e-10!102;UBERON:0003061!4.32e-10!102;UBERON:0001474!9.00e-10!86;UBERON:0002371!5.49e-09!80;UBERON:0002193!7.52e-08!112;UBERON:0004765!3.79e-07!101;UBERON:0001434!3.79e-07!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.53e-17,98;UBERON:0003061,2.53e-17,98;UBERON:0002371,1.80e-15,76;UBERON:0001474,2.16e-15,82;UBERON:0002193,2.13e-14,108;UBERON:0002405,3.65e-13,93;UBERON:0004765,5.96e-13,90;UBERON:0001434,1.67e-10,100;UBERON:0002384,5.92e-08,371|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0.872338524100369,0,0,0.783556884599516,0,0,0.655324116390517,0,0.247532705920093,0,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0.382067028739756,0.738905305049512,0.314843125254717,0.786728553697808,1.53531759238885,0.77408061658038,0,0.30120591877825,0,3.71842562785448,1.27952309238679,0.880801318004542,1.10799081706375,1.20326668482085,0.651032612147555,0.223915474239924,0,0.257575567634187,3.05336301437086,4.1566353805769,5.82201746850759,3.71886459049095,8.63452564845834,11.4591357231188,2.01384674625505,3.84241059793651,4.7296445977717,6.55016793399575,7.74581620300591,14.8969135253776,2.25890807451126,4.09359225086769,5.16864014223695,3.06083892370903,8.34415470397843,5.75403413219137,1.64925650093358,2.79249120670285,2.55734850319616,2.32167390902867,7.94339314567596,8.71951148593805,6.78371396193207,5.21482918420201,5.86409880703815,5.44859552370032,13.6262725315399,8.86094684834476,0.211255286311942,0.212604299965044,0.209658645508376,0.336985893439485,0.300353785683013,0.48217676009124,0,0.39783335439818,0.547992461293902,0,0,0,0.853460445133014,0.400395987036012,0,1.32208974556972,0,2.27685187643779,0.587237189370939,0.764546456250458,0,0,0.526768169550154,1.180258620683,2.35806457649499,4.11202997999018,0.334372990781356,0.977766799900771,0,1.94826728407911,0,1.47302953737419,0.886135578334485,1.35401931882508,0.25618263945135,0.390178042679635,0.657751618414705,1.10540007114339,0.289803085735052,1.18629250529648,0.267540828089713,1.04535523804977,0.226618685395132,1.14966148080576,1.37450978193052,1.26509846009751,0,0.651083453856419,0,0.602300476311091,0,1.24930726552346,0.473554504088034,0,2.21767417547206,2.40696176205157,2.46201486600758,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.665188192387692,0.263504357079378,0.589405839739707,0.364295288292542,0.370784442784429,0.324547393654683,0.870648686496336,0.797747763113191,0.953962497221368,1.14398982156026,0.74291500265913,0.596287222100115,0,0,0,0,0.275118041940067,0.208994966536811,0,0.35576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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000501976_5end | |||
|coexpression_cluster_id=C1356 | |||
|description=CAGE_peak_1_at_ENST00000501976_5end | |||
|id=chr4:100871681..100871699,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.93e-28!172;CL:0000566!3.93e-28!172;CL:0000988!3.43e-27!182;CL:0002032!1.10e-25!165;CL:0000837!1.10e-25!165;CL:0000738!1.37e-25!140;CL:0002031!6.32e-20!124;CL:0002087!1.96e-19!119;CL:0000860!7.47e-18!45;CL:0002057!3.10e-17!42;CL:0000763!5.45e-16!112;CL:0000049!5.45e-16!112;CL:0000766!1.43e-12!76;CL:0000557!6.72e-11!71;CL:0000839!1.30e-10!70;CL:0002009!1.33e-10!65;CL:0002194!8.82e-10!63;CL:0000576!8.82e-10!63;CL:0000040!8.82e-10!63;CL:0000559!8.82e-10!63;CL:0000542!2.35e-09!53;CL:0000051!2.35e-09!53;CL:0000838!6.22e-09!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.92e-33;33!CL:0002057;7.92e-33;33!CL:0000473;1.61e-21;39!CL:0000234;1.61e-21;39!CL:0000576;5.76e-15;48!CL:0002087;2.68e-11;104!CL:0000766;3.85e-10;69!CL:0000084;1.09e-09;25!CL:0000738;7.65e-09;136!CL:0000542;9.94e-09;53!CL:0000988;4.80e-08;177!CL:0000763;2.09e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.55e-39,177;CL:0000738,8.44e-39,136;CL:0000037,1.72e-38,168;CL:0002032,8.98e-37,161;CL:0000837,8.98e-37,161;CL:0002031,6.88e-32,120;CL:0002087,2.52e-31,115;CL:0000860,5.94e-29,42;CL:0002057,5.94e-29,42;CL:0000473,7.76e-24,48;CL:0000234,7.76e-24,48;CL:0000763,7.36e-22,108;CL:0000049,7.36e-22,108;CL:0000766,9.76e-21,72;CL:0000557,3.65e-19,67;CL:0002009,1.95e-18,61;CL:0000839,4.29e-17,66;CL:0002194,8.70e-17,59;CL:0000576,8.70e-17,59;CL:0000040,8.70e-17,59;CL:0000559,8.70e-17,59;CL:0000542,9.75e-14,53;CL:0000051,9.75e-14,53;CL:0000838,5.87e-13,52;CL:0000084,1.20e-09,25;CL:0000827,1.20e-09,25;CL:0000134,5.42e-09,354;CL:0000219,1.30e-08,386;CL:0002320,2.25e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-21;42!CL:0000051;9.94e-09;53!CL:0000049;5.89e-07;108 | |||
|ontology_enrichment_disease=DOID:14566!1.10e-10!239;DOID:162!3.21e-10!235;DOID:2531!5.62e-08!51;DOID:0060083!5.62e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.68e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.63e-10,51;DOID:0060083,6.63e-10,51;DOID:0060058,2.51e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.32e-10!102;UBERON:0003061!4.32e-10!102;UBERON:0001474!9.00e-10!86;UBERON:0002371!5.49e-09!80;UBERON:0002193!7.52e-08!112;UBERON:0004765!3.79e-07!101;UBERON:0001434!3.79e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.53e-17,98;UBERON:0003061,2.53e-17,98;UBERON:0002371,1.80e-15,76;UBERON:0001474,2.16e-15,82;UBERON:0002193,2.13e-14,108;UBERON:0002405,3.65e-13,93;UBERON:0004765,5.96e-13,90;UBERON:0001434,1.67e-10,100;UBERON:0002384,5.92e-08,371 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0.872338524100369,0,0,0.783556884599516,0,0,0.655324116390517,0,0.247532705920093,0,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0.382067028739756,0.738905305049512,0.314843125254717,0.786728553697808,1.53531759238885,0.77408061658038,0,0.30120591877825,0,3.71842562785448,1.27952309238679,0.880801318004542,1.10799081706375,1.20326668482085,0.651032612147555,0.223915474239924,0,0.257575567634187,3.05336301437086,4.1566353805769,5.82201746850759,3.71886459049095,8.63452564845834,11.4591357231188,2.01384674625505,3.84241059793651,4.7296445977717,6.55016793399575,7.74581620300591,14.8969135253776,2.25890807451126,4.09359225086769,5.16864014223695,3.06083892370903,8.34415470397843,5.75403413219137,1.64925650093358,2.79249120670285,2.55734850319616,2.32167390902867,7.94339314567596,8.71951148593805,6.78371396193207,5.21482918420201,5.86409880703815,5.44859552370032,13.6262725315399,8.86094684834476,0.211255286311942,0.212604299965044,0.209658645508376,0.336985893439485,0.300353785683013,0.48217676009124,0,0.39783335439818,0.547992461293902,0,0,0,0.853460445133014,0.400395987036012,0,1.32208974556972,0,2.27685187643779,0.587237189370939,0.764546456250458,0,0,0.526768169550154,1.180258620683,2.35806457649499,4.11202997999018,0.334372990781356,0.977766799900771,0,1.94826728407911,0,1.47302953737419,0.886135578334485,1.35401931882508,0.25618263945135,0.390178042679635,0.657751618414705,1.10540007114339,0.289803085735052,1.18629250529648,0.267540828089713,1.04535523804977,0.226618685395132,1.14966148080576,1.37450978193052,1.26509846009751,0,0.651083453856419,0,0.602300476311091,0,1.24930726552346,0.473554504088034,0,2.21767417547206,2.40696176205157,2.46201486600758,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.665188192387692,0.263504357079378,0.589405839739707,0.364295288292542,0.370784442784429,0.324547393654683,0.870648686496336,0.797747763113191,0.953962497221368,1.14398982156026,0.74291500265913,0.596287222100115,0,0,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0,0.357198913136319,0.22452937262617,0.112611480483322,0,1.89853131913626,0,2.63560834872127,3.87780264148325,0,0,0,1.19168262731897,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0.70296429550139,0,0,0,0.469737994575059,0.485618833104395,0.140450806702248,0.61246251376468,0.122834317311768,0.619954687054593,0,0,0,0,0.168336113954066,0.750711119231785,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0,0,0.300091096084402,0,0.515281080091258,0,0.168776332241266,0,0,0.276149695926898,0.484938170456436,0,0,0.339121184620975,0.193260853163297,0.272746120590835,0,0.731842236777572,0.265059536642971,0.464775771478074,0.310983165046111,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0,0.237270619111097,0.539325232640658,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,6.18048339180511,0.368965315629341,0.171567810298526,0.109750285408626,0,0.201057944823262,0.185176890317059,0.325808305310325,0,0,0,0.117408694235822,0.288732895522148,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0.283550194484773,0,0,0,1.47798971368783,0.264145302039678,1.4512968087854,0.288239906833923,1.51490920111656,0.507983154337352,0.763976851116555,2.34434894420094,1.71072446022705,0.514137463516618,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0,0,0.532844358032199,0,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,4.14715032776051,2.1673383622212,1.50939302401662,1.54011643535698,0,1.30139853857622,0,0,1.27587750330633,1.49801404789436,0,2.90090859405225,0,0.500170521059677,0,0,0.356857977594324,0.315404830067869,0,0,0,1.03473071292505,0,0,0.260650843404249,0,0,1.03384013061444,1.07857100409308,0.960548020230999,0.909382714338778,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0.368323955743585,0.574072240823034,0.728364672026868,0.786746489756545,0,0,0.784349769176855,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0,0.206082023295445,0.732555718546747,0.82509499920588,0,0,0,0.193341436584244,0,0,0.137836572484531,0.429680979473094,0.290033387828457,0.255679882248303,0.178064071293475,0.165284915360978,0.192190067365106,0.382838137483752,0.30347334256665,0,0,0,0,0.532306030317022,0,0,0.286249773483982,0,0,0.38126038784765,0.255897791311334,0.42793898803392,0.318203247925937,0,0.179872457583315,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.0982490410131212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| |||
|short_description=p1@ENST00000501976 | |||
}} |
Revision as of 01:46, 13 September 2013
Short description: | p1@ENST00000501976 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000501976_5end |
Coexpression cluster: | C1356_CD14_thymus_Hodgkin_NK_anaplastic_hepatoblastoma_lymphangiectasia |
Association with transcript: | 1bp_to_ENST00000501976_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.55e-39 | 177 |
leukocyte | 8.44e-39 | 136 |
hematopoietic stem cell | 1.72e-38 | 168 |
hematopoietic oligopotent progenitor cell | 8.98e-37 | 161 |
hematopoietic multipotent progenitor cell | 8.98e-37 | 161 |
hematopoietic lineage restricted progenitor cell | 6.88e-32 | 120 |
nongranular leukocyte | 2.52e-31 | 115 |
classical monocyte | 5.94e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.94e-29 | 42 |
defensive cell | 7.76e-24 | 48 |
phagocyte | 7.76e-24 | 48 |
myeloid cell | 7.36e-22 | 108 |
common myeloid progenitor | 7.36e-22 | 108 |
myeloid leukocyte | 9.76e-21 | 72 |
granulocyte monocyte progenitor cell | 3.65e-19 | 67 |
macrophage dendritic cell progenitor | 1.95e-18 | 61 |
myeloid lineage restricted progenitor cell | 4.29e-17 | 66 |
monopoietic cell | 8.70e-17 | 59 |
monocyte | 8.70e-17 | 59 |
monoblast | 8.70e-17 | 59 |
promonocyte | 8.70e-17 | 59 |
lymphocyte | 9.75e-14 | 53 |
common lymphoid progenitor | 9.75e-14 | 53 |
lymphoid lineage restricted progenitor cell | 5.87e-13 | 52 |
T cell | 1.20e-09 | 25 |
pro-T cell | 1.20e-09 | 25 |
mesenchymal cell | 5.42e-09 | 354 |
motile cell | 1.30e-08 | 386 |
connective tissue cell | 2.25e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.53e-17 | 98 |
blood island | 2.53e-17 | 98 |
bone marrow | 1.80e-15 | 76 |
bone element | 2.16e-15 | 82 |
hemolymphoid system | 2.13e-14 | 108 |
immune system | 3.65e-13 | 93 |
skeletal element | 5.96e-13 | 90 |
skeletal system | 1.67e-10 | 100 |
connective tissue | 5.92e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.63e-10 | 51 |
immune system cancer | 6.63e-10 | 51 |
lymphoma | 2.51e-09 | 10 |
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