FFCP PHASE1:Hg19::chr4:69169370..69169376,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:69169370..69169376,-|id=chr4:69169370..69169376,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002379;1.18e-13;1!CL:0002097;9.25e-08;2!CL:1000415;1.81e-07;2|ontology_enrichment_celltype_v019_2=CL:0002379,1.61e-13,1;CL:0002097,9.25e-08,2;CL:1000415,1.54e-07,2|ontology_enrichment_development_v019=UBERON:0008814;1.81e-07;2!UBERON:0010056;1.81e-07;2|ontology_enrichment_disease=DOID:162!1.69e-37!235;DOID:14566!3.75e-37!239;DOID:0050687!3.77e-33!143;DOID:305!1.71e-23!106;DOID:0050686!1.15e-15!137;DOID:1749!4.69e-13!14;DOID:3095!6.72e-08!22;DOID:2994!6.72e-08!22;DOID:171!7.29e-08!10;DOID:3119!3.08e-07!14|ontology_enrichment_disease_v019=DOID:630;1.18e-13;1!DOID:0050177;1.18e-13;1!DOID:3620;1.18e-13;1!DOID:3565;1.18e-13;1!DOID:0050427;1.18e-13;1|ontology_enrichment_disease_v019_2=DOID:630,7.55e-14,1;DOID:0050177,7.55e-14,1;DOID:0050427,7.55e-14,1;DOID:3620,1.61e-13,1;DOID:3565,1.61e-13,1|ontology_enrichment_uberon=UBERON:0002294!1.87e-07!7;UBERON:0001173!1.87e-07!7;UBERON:0004912!1.87e-07!7;UBERON:0000344!3.74e-07!12;UBERON:0003343!8.90e-07!4;UBERON:0004785!8.90e-07!4|ontology_enrichment_uberon_v019=UBERON:0003343;1.77e-13;4!UBERON:0004785;1.77e-13;4!UBERON:0000974;2.72e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.95e-13,4;UBERON:0004785,1.95e-13,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387336002901508,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0.128343036279748,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.853702120180969,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0.851692475380653,0,0,0,0.166849141711909,0,0,0,0,0,1.4098700508785,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0,1.33570446027487,0,0.422250816255987,0,0,0,0,0.246169610922139,0,0.449341755736634,0.537063524026827,0,0,0,0,0,0,0,0,0.962059999958153,0,0,0.254253650292766,0,0.344743373241465,2.04123229368278,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0.557694977114413,0,0.227884111694002,0.23056390438806,0,0,0,0,0,1.02193298195737,0.156980256395025,0.332423363800313,0,0,0,0.569261198172555,0.794682894901893,0.632994193584081,0.816164040795739,0.424059214301822,0.216388639742091,0,0,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0.485560759068186,0,2.41981432097328,0,0,0,0.103688191397247,0.664653872707185,0,0,0,0,0.138674673013139,0.173559738335131,0.587954384486266,0.261177619741208,0,0.171986032471617,0,0,0,0,0.0882561266915003,0,0.274083849293502,0,0,0,1.52301758477914,0.213452994739353,0.599428828746391,0.288180834308212,0,0,0.288109595976299,0.621262677827163,0.235694034616795,0.271808412147228,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0,0.575745591958336,0,0,0,0,0,0,2.39460383124975,0,0,0,0,1.32506888912221,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.691743174681154,0,0.606596470166591,0.285465333544967,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,3.64550705337374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0.845248493434508,0,0,0.172214979660816,0,0,0,0,1.66262682694747,0,0.786329709279482,0.218419276384028,0.169732529954025,2.12574920101683,0.123935764259002,0,0,0.630893960010027,0,0,0,0,0,0,0,0,0,0,0,2.35554524402461,0.235939446695481,0.366857197043358,1.27078232765372,0.381382095467167,0.690359926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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:69169370..69169376,- | |||
|id=chr4:69169370..69169376,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002379;1.18e-13;1!CL:0002097;9.25e-08;2!CL:1000415;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.61e-13,1;CL:0002097,9.25e-08,2;CL:1000415,1.54e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.81e-07;2!UBERON:0010056;1.81e-07;2 | |||
|ontology_enrichment_disease=DOID:162!1.69e-37!235;DOID:14566!3.75e-37!239;DOID:0050687!3.77e-33!143;DOID:305!1.71e-23!106;DOID:0050686!1.15e-15!137;DOID:1749!4.69e-13!14;DOID:3095!6.72e-08!22;DOID:2994!6.72e-08!22;DOID:171!7.29e-08!10;DOID:3119!3.08e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:630;1.18e-13;1!DOID:0050177;1.18e-13;1!DOID:3620;1.18e-13;1!DOID:3565;1.18e-13;1!DOID:0050427;1.18e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.55e-14,1;DOID:0050177,7.55e-14,1;DOID:0050427,7.55e-14,1;DOID:3620,1.61e-13,1;DOID:3565,1.61e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.87e-07!7;UBERON:0001173!1.87e-07!7;UBERON:0004912!1.87e-07!7;UBERON:0000344!3.74e-07!12;UBERON:0003343!8.90e-07!4;UBERON:0004785!8.90e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.77e-13;4!UBERON:0004785;1.77e-13;4!UBERON:0000974;2.72e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.95e-13,4;UBERON:0004785,1.95e-13,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387336002901508,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0.128343036279748,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.853702120180969,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0.851692475380653,0,0,0,0.166849141711909,0,0,0,0,0,1.4098700508785,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0,1.33570446027487,0,0.422250816255987,0,0,0,0,0.246169610922139,0,0.449341755736634,0.537063524026827,0,0,0,0,0,0,0,0,0.962059999958153,0,0,0.254253650292766,0,0.344743373241465,2.04123229368278,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0.557694977114413,0,0.227884111694002,0.23056390438806,0,0,0,0,0,1.02193298195737,0.156980256395025,0.332423363800313,0,0,0,0.569261198172555,0.794682894901893,0.632994193584081,0.816164040795739,0.424059214301822,0.216388639742091,0,0,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0.485560759068186,0,2.41981432097328,0,0,0,0.103688191397247,0.664653872707185,0,0,0,0,0.138674673013139,0.173559738335131,0.587954384486266,0.261177619741208,0,0.171986032471617,0,0,0,0,0.0882561266915003,0,0.274083849293502,0,0,0,1.52301758477914,0.213452994739353,0.599428828746391,0.288180834308212,0,0,0.288109595976299,0.621262677827163,0.235694034616795,0.271808412147228,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0,0.575745591958336,0,0,0,0,0,0,2.39460383124975,0,0,0,0,1.32506888912221,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.691743174681154,0,0.606596470166591,0.285465333544967,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,3.64550705337374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0.845248493434508,0,0,0.172214979660816,0,0,0,0,1.66262682694747,0,0.786329709279482,0.218419276384028,0.169732529954025,2.12574920101683,0.123935764259002,0,0,0.630893960010027,0,0,0,0,0,0,0,0,0,0,0,2.35554524402461,0.235939446695481,0.366857197043358,1.27078232765372,0.381382095467167,0.690359926060101,0.198916222116275,0,0.20170506870352,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0.691403925334676,0,0,0,0.354581522651905,0.333694205676207,0,0,0,0,1.07963795609311,0,0,0,0,0.695433089210318,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0,0.233939463462106,0.994753875806841,0,0.90356865631168,0,0,0,0,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0,0.0999411559249289,0.178553938605658,0.352894871715692,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0.756998549010474,0.218531143927391,0,0,0.26721740526556,0,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732629417498771,0.320182037633146,0,0.179650404213174,0,0,0,0,0,1.60284246151616 | |||
|short_description=p@chr4:69169370..69169376,- | |||
}} |
Revision as of 11:22, 13 September 2013
Short description: | p@chr4:69169370..69169376, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:69169370..69169376, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.61e-13 | 1 |
cortical cell of adrenal gland | 9.25e-08 | 2 |
epithelial cell of gall bladder | 1.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.95e-13 | 4 |
respiratory system mucosa | 1.95e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.55e-14 | 1 |
monogenic disease | 7.55e-14 | 1 |
xeroderma pigmentosum | 7.55e-14 | 1 |
central nervous system cancer | 1.61e-13 | 1 |
meningioma | 1.61e-13 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.