FFCP PHASE1:Hg19::chr4:47033607..47033625,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2560|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4081|TSSclassifier=S|UniProt=|association_with_transcript=9bp_to_ENST00000381582_5end|coexpression_cluster_id=C3|description=CAGE_peak_2_at_GABRB1_5end|id=chr4:47033607..47033625,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.17e-23;82!UBERON:0006215;2.07e-10;3!UBERON:0006241;2.65e-09;3!UBERON:0003057;2.65e-09;3!UBERON:0010122;5.95e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.28e-63!57;UBERON:0005068!6.28e-63!57;UBERON:0006241!6.28e-63!57;UBERON:0007135!6.28e-63!57;UBERON:0005743!1.63e-57!86;UBERON:0001017!4.11e-57!82;UBERON:0000073!7.40e-54!94;UBERON:0001016!7.40e-54!94;UBERON:0003075!2.18e-53!86;UBERON:0007284!2.18e-53!86;UBERON:0002616!2.08e-52!59;UBERON:0002346!4.36e-52!90;UBERON:0000955!5.55e-52!69;UBERON:0006238!5.55e-52!69;UBERON:0002780!3.11e-51!41;UBERON:0001890!3.11e-51!41;UBERON:0006240!3.11e-51!41;UBERON:0003080!1.04e-49!42;UBERON:0007023!5.04e-47!115;UBERON:0001893!7.27e-42!34;UBERON:0002020!7.69e-42!34;UBERON:0003528!7.69e-42!34;UBERON:0003056!4.38e-41!61;UBERON:0002791!2.44e-40!33;UBERON:0001869!3.47e-39!32;UBERON:0000033!1.15e-37!123;UBERON:0000153!5.79e-35!129;UBERON:0007811!5.79e-35!129;UBERON:0004121!1.47e-34!169;UBERON:0000924!1.98e-34!173;UBERON:0006601!1.98e-34!173;UBERON:0002619!2.38e-33!22;UBERON:0001950!4.45e-30!20;UBERON:0000956!1.47e-28!25;UBERON:0000203!1.47e-28!25;UBERON:0000025!7.33e-16!194;UBERON:0002420!2.86e-15!9;UBERON:0007245!2.86e-15!9;UBERON:0010009!2.86e-15!9;UBERON:0010011!2.86e-15!9;UBERON:0000454!2.86e-15!9;UBERON:0002308!8.39e-15!9;UBERON:0000125!8.39e-15!9;UBERON:0003076!6.28e-14!15;UBERON:0003057!6.28e-14!15;UBERON:0004111!7.53e-13!241;UBERON:0009663!4.88e-12!7;UBERON:0000477!1.42e-11!286;UBERON:0000064!5.39e-11!219;UBERON:0000200!6.44e-11!6;UBERON:0001871!1.01e-10!7;UBERON:0001894!1.35e-10!7;UBERON:0006222!1.35e-10!7;UBERON:0000483!1.40e-10!309;UBERON:0000119!2.75e-10!312;UBERON:0004733!3.18e-10!12;UBERON:0002028!3.18e-10!12;UBERON:0007277!3.18e-10!12;UBERON:0000062!8.90e-10!511;UBERON:0000349!1.02e-09!5;UBERON:0002298!1.17e-09!8;UBERON:0000481!1.98e-09!347;UBERON:0004732!2.93e-09!13;UBERON:0002021!4.70e-09!5;UBERON:0001872!5.52e-09!5;UBERON:0000475!7.51e-09!365;UBERON:0000369!4.62e-08!4;UBERON:0002435!4.62e-08!4;UBERON:0000204!4.62e-08!4;UBERON:0010082!4.62e-08!4|ontology_enrichment_uberon_v019=UBERON:0001893;6.12e-70;34!UBERON:0003528;1.51e-69;34!UBERON:0002020;1.51e-69;34!UBERON:0002780;2.92e-69;41!UBERON:0001890;2.92e-69;41!UBERON:0001869;6.80e-69;32!UBERON:0002791;1.24e-68;32!UBERON:0000073;2.56e-66;53!UBERON:0002616;2.56e-66;53!UBERON:0002619;1.77e-64;22!UBERON:0001950;5.12e-58;20!UBERON:0000956;2.62e-56;25!UBERON:0000203;2.62e-56;25!UBERON:0000955;7.46e-45;68!UBERON:0001017;8.80e-45;75!UBERON:0001016;1.75e-37;83!UBERON:0002420;1.85e-28;9!UBERON:0007245;1.85e-28;9!UBERON:0010009;1.85e-28;9!UBERON:0010011;1.85e-28;9!UBERON:0000454;1.85e-28;9!UBERON:0000125;1.31e-27;9!UBERON:0002308;1.31e-27;9!UBERON:0009663;4.08e-22;7!UBERON:0000200;7.74e-20;6!UBERON:0004733;1.39e-19;12!UBERON:0002028;1.39e-19;12!UBERON:0002298;5.05e-18;6!UBERON:0004732;6.09e-18;13!UBERON:0000349;1.69e-17;5!UBERON:0007023;3.25e-17;114!UBERON:0001871;7.49e-17;6!UBERON:0002021;3.16e-16;5!UBERON:0001872;4.68e-16;5!UBERON:0011216;1.45e-15;132!UBERON:0001894;7.68e-15;7!UBERON:0000369;2.96e-14;4!UBERON:0002435;2.96e-14;4!UBERON:0000204;2.96e-14;4!UBERON:0002680;3.64e-12;9!UBERON:0001895;3.64e-12;9!UBERON:0005383;3.49e-11;3!UBERON:0005382;3.49e-11;3!UBERON:0001870;7.06e-11;3!UBERON:0000988;6.49e-10;3!UBERON:0001896;8.05e-10;3!UBERON:0005290;8.05e-10;3!UBERON:0002240;2.65e-09;3!UBERON:0005174;2.65e-09;3!UBERON:0001137;2.65e-09;3!UBERON:0010314;4.55e-09;132!UBERON:0001876;4.63e-08;2!UBERON:0001954;4.63e-08;2!UBERON:0003022;4.63e-08;2!UBERON:0002421;4.63e-08;2!UBERON:0002600;4.63e-08;2!UBERON:0001873;5.95e-08;2!UBERON:0002771;6.46e-08;2!UBERON:0002702;7.75e-08;2!UBERON:0003296;2.59e-07;4!UBERON:0010133;2.59e-07;4!UBERON:0002148;3.44e-07;2!UBERON:0006331;3.44e-07;2!UBERON:0009662;3.44e-07;2!UBERON:0000007;3.50e-07;2!UBERON:0002784;3.78e-07;4!UBERON:0001875;4.28e-07;2!UBERON:0006514;4.28e-07;2!UBERON:0001897;5.92e-07;2!UBERON:0010225;5.92e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.24e-124,56;UBERON:0005068,5.24e-124,56;UBERON:0006241,5.24e-124,56;UBERON:0007135,5.24e-124,56;UBERON:0000073,9.48e-116,53;UBERON:0002616,9.48e-116,53;UBERON:0001017,2.12e-100,81;UBERON:0000955,3.76e-99,68;UBERON:0006238,3.76e-99,68;UBERON:0002780,1.31e-96,41;UBERON:0001890,1.31e-96,41;UBERON:0003080,1.31e-96,41;UBERON:0006240,1.31e-96,41;UBERON:0001016,6.98e-93,89;UBERON:0001893,9.92e-83,34;UBERON:0003528,1.11e-82,34;UBERON:0002020,1.11e-82,34;UBERON:0003075,2.28e-81,82;UBERON:000728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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2560 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4081 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENST00000381582_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GABRB1_5end | |||
|id=chr4:47033607..47033625,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.17e-23;82!UBERON:0006215;2.07e-10;3!UBERON:0006241;2.65e-09;3!UBERON:0003057;2.65e-09;3!UBERON:0010122;5.95e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@GABRB1 | |||
}} |
Revision as of 11:01, 13 September 2013
Short description: | p2@GABRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GABRB1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 9bp_to_ENST00000381582_5end |
EntrezGene: | GABRB1 |
HGNC: | 4081 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.