FFCP PHASE1:Hg19::chr4:42154592..42154600,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=389206|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23815|TSSclassifier=W|UniProt=|association_with_transcript=-199bp_to_uc011byy.1_5end|coexpression_cluster_id=C215|description=CAGE_peak_15_at_BEND4_5end|id=chr4:42154592..42154600,-|ontology_enrichment_celltype=CL:0001024!4.57e-08!1|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:154!7.14e-14!2;DOID:4236!7.14e-14!2|ontology_enrichment_disease_v019=DOID:1036;5.22e-26;8!DOID:1240;2.32e-07;39!DOID:8692;2.32e-07;31|ontology_enrichment_disease_v019_2=DOID:1036,5.22e-26,8;DOID:8692,7.41e-08,31|ontology_enrichment_uberon=UBERON:0002135!7.26e-08!1;UBERON:0000473!1.14e-07!8;UBERON:0002902!1.69e-07!1;UBERON:0009899!1.69e-07!1;UBERON:0002022!1.91e-07!1;UBERON:0001882!3.17e-07!1;UBERON:0005403!3.17e-07!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0.142169232487422,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.218419276384028,0,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.227336094654718,0.535928260312357,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p15@BEND4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=389206 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23815 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-199bp_to_uc011byy.1_5end | |||
|coexpression_cluster_id=C215 | |||
|description=CAGE_peak_15_at_BEND4_5end | |||
|id=chr4:42154592..42154600,- | |||
|ontology_enrichment_celltype=CL:0001024!4.57e-08!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:154!7.14e-14!2;DOID:4236!7.14e-14!2 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.22e-26;8!DOID:1240;2.32e-07;39!DOID:8692;2.32e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.22e-26,8;DOID:8692,7.41e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002135!7.26e-08!1;UBERON:0000473!1.14e-07!8;UBERON:0002902!1.69e-07!1;UBERON:0009899!1.69e-07!1;UBERON:0002022!1.91e-07!1;UBERON:0001882!3.17e-07!1;UBERON:0005403!3.17e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p15@BEND4 | |||
}} |
Revision as of 10:57, 13 September 2013
Short description: | p15@BEND4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_BEND4_5end |
Coexpression cluster: | C215_chronic_acute_peripheral_Hepatocyte_osteosarcoma_NK_immature |
Association with transcript: | -199bp_to_uc011byy.1_5end |
EntrezGene: | BEND4 |
HGNC: | 23815 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.22e-26 | 8 |
myeloid leukemia | 7.41e-08 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.