FFCP PHASE1:Hg19::chr4:40632844..40632877,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54502|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30358|TSSclassifier=S|UniProt=D6R9M7|association_with_transcript=0bp_to_ENST00000505414_5end|coexpression_cluster_id=C26|description=CAGE_peak_1_at_RBM47_5end|id=chr4:40632844..40632877,-|ontology_enrichment_celltype=CL:0000766!1.21e-36!76;CL:0000738!4.52e-36!140;CL:0002009!2.19e-34!65;CL:0002194!3.94e-33!63;CL:0000576!3.94e-33!63;CL:0000040!3.94e-33!63;CL:0000559!3.94e-33!63;CL:0000557!1.25e-32!71;CL:0002057!2.97e-31!42;CL:0000860!8.71e-31!45;CL:0000839!5.45e-29!70;CL:0002087!1.46e-28!119;CL:0002031!1.60e-25!124;CL:0000037!1.37e-24!172;CL:0000566!1.37e-24!172;CL:0000763!1.16e-22!112;CL:0000049!1.16e-22!112;CL:0002032!2.18e-22!165;CL:0000837!2.18e-22!165;CL:0000988!6.58e-21!182;CL:0000451!7.45e-08!10;CL:0000094!3.51e-07!8;CL:0002393!6.49e-07!9;CL:0002397!6.49e-07!9|ontology_enrichment_celltype_v019=CL:0000860;3.46e-27;33!CL:0002057;3.46e-27;33!CL:0000473;1.53e-26;39!CL:0000234;1.53e-26;39!CL:0000576;1.25e-22;48!CL:0000766;2.17e-17;69!CL:0002087;9.63e-10;104!CL:0000738;3.39e-09;136!CL:0000451;6.52e-09;10!CL:0000094;3.91e-08;8!CL:0000763;7.30e-08;100!CL:0000990;1.36e-07;8|ontology_enrichment_celltype_v019_2=CL:0000766,1.27e-42,72;CL:0002009,2.00e-41,61;CL:0000473,7.69e-41,48;CL:0000234,7.69e-41,48;CL:0002194,5.94e-40,59;CL:0000576,5.94e-40,59;CL:0000040,5.94e-40,59;CL:0000559,5.94e-40,59;CL:0000738,1.03e-38,136;CL:0000557,6.81e-38,67;CL:0000860,3.04e-36,42;CL:0002057,3.04e-36,42;CL:0000839,7.15e-34,66;CL:0002087,7.80e-31,115;CL:0000763,3.48e-28,108;CL:0000049,3.48e-28,108;CL:0000037,6.41e-28,168;CL:0002031,7.86e-27,120;CL:0002032,2.90e-25,161;CL:0000837,2.90e-25,161;CL:0000988,1.94e-24,177;CL:0000451,6.57e-09,10;CL:0000094,4.01e-08,8;CL:0002393,8.18e-08,9;CL:0002397,8.18e-08,9;CL:0000990,1.37e-07,8|ontology_enrichment_development_v019=CL:0002057;3.39e-26;42!CL:0000049;2.39e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.46e-32!102;UBERON:0003061!1.46e-32!102;UBERON:0007023!2.21e-29!115;UBERON:0002193!4.07e-28!112;UBERON:0002371!9.34e-27!80;UBERON:0001474!2.55e-23!86;UBERON:0002405!1.46e-19!115;UBERON:0004765!2.99e-19!101;UBERON:0001434!2.99e-19!101;UBERON:0000062!1.90e-10!511;UBERON:0001049!8.85e-07!57;UBERON:0005068!8.85e-07!57;UBERON:0006241!8.85e-07!57;UBERON:0007135!8.85e-07!57|ontology_enrichment_uberon_v019=UBERON:0007023;1.83e-07;114!UBERON:0000178;3.21e-07;15!UBERON:0000179;3.21e-07;15!UBERON:0000463;3.21e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.68e-38,98;UBERON:0003061,1.68e-38,98;UBERON:0002193,3.92e-34,108;UBERON:0002371,4.67e-31,76;UBERON:0007023,4.57e-29,114;UBERON:0002405,1.02e-27,93;UBERON:0001474,1.45e-27,82;UBERON:0004765,2.48e-24,90;UBERON:0001434,2.89e-19,100;UBERON:0003081,1.23e-09,203;UBERON:0000178,3.24e-07,15;UBERON:0000179,3.24e-07,15;UBERON:0000463,3.24e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0,0,0.123766352960047,0,2.01697543935533,0,0,0,0,0,0,0,0,0,5.73100543109634,6.32174538764582,5.98201937983962,42.0899776228327,34.1608164306519,35.4528922393814,0.919421224478927,0.6024118375565,0.369754010166788,0,0,1.76160263600908,50.4135821764008,72.3965455367211,46.4403263331923,66.9507267977374,52.1468802290557,62.5908629351073,85.7849608799432,95.9804896969576,98.0039607198777,103.198492386124,113.482337094024,110.565174409552,186.712362617076,183.411065874836,201.955824324852,131.003358679915,134.260814185436,123.238102800851,91.4857770177059,81.8718450173537,77.080155164664,129.167402580521,157.897081321438,104.851288631043,207.806319117631,186.897447191469,219.079521773805,138.139597587206,138.441994824638,145.117584015969,178.637800997544,144.972251320816,174.402642298209,137.425687097775,183.402262721807,155.383032233474,37.1809303909018,36.1427309940574,37.948214837016,60.5451321879609,65.9276559574213,83.5773050824817,23.9410704742649,21.8808344918999,26.1209739883427,0,2.18455444504853,2.66852776159066,5.12076267079809,0.400395987036012,2.87376219977242,2.64417949113945,1.90810750907073,2.27685187643779,2.93618594685469,4.58727873750275,3.96513985737078,13.4522055115569,3.16060901730092,0.196709770113833,0.393010762749165,1.02800749499755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,1.59282707162048,0,0.950452044448374,2.10805166708882,0.895906278080929,7.49584359314075,5.91943130110042,2.46338399076314,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.886917589850256,0.702678285545008,3.66741411393595,1.09288586487763,0.370784442784429,33.4283815464324,39.5274503669337,29.2507513141503,30.0498186624731,25.7397709851058,30.8309726103539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,129.144809087342,174.501118866746,0.872188104285069,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,1.09098448236334,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54502 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30358 | |||
|TSSclassifier=S | |||
|UniProt=D6R9M7 | |||
|association_with_transcript=0bp_to_ENST00000505414_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_RBM47_5end | |||
|id=chr4:40632844..40632877,- | |||
|ontology_enrichment_celltype=CL:0000766!1.21e-36!76;CL:0000738!4.52e-36!140;CL:0002009!2.19e-34!65;CL:0002194!3.94e-33!63;CL:0000576!3.94e-33!63;CL:0000040!3.94e-33!63;CL:0000559!3.94e-33!63;CL:0000557!1.25e-32!71;CL:0002057!2.97e-31!42;CL:0000860!8.71e-31!45;CL:0000839!5.45e-29!70;CL:0002087!1.46e-28!119;CL:0002031!1.60e-25!124;CL:0000037!1.37e-24!172;CL:0000566!1.37e-24!172;CL:0000763!1.16e-22!112;CL:0000049!1.16e-22!112;CL:0002032!2.18e-22!165;CL:0000837!2.18e-22!165;CL:0000988!6.58e-21!182;CL:0000451!7.45e-08!10;CL:0000094!3.51e-07!8;CL:0002393!6.49e-07!9;CL:0002397!6.49e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.46e-27;33!CL:0002057;3.46e-27;33!CL:0000473;1.53e-26;39!CL:0000234;1.53e-26;39!CL:0000576;1.25e-22;48!CL:0000766;2.17e-17;69!CL:0002087;9.63e-10;104!CL:0000738;3.39e-09;136!CL:0000451;6.52e-09;10!CL:0000094;3.91e-08;8!CL:0000763;7.30e-08;100!CL:0000990;1.36e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.27e-42,72;CL:0002009,2.00e-41,61;CL:0000473,7.69e-41,48;CL:0000234,7.69e-41,48;CL:0002194,5.94e-40,59;CL:0000576,5.94e-40,59;CL:0000040,5.94e-40,59;CL:0000559,5.94e-40,59;CL:0000738,1.03e-38,136;CL:0000557,6.81e-38,67;CL:0000860,3.04e-36,42;CL:0002057,3.04e-36,42;CL:0000839,7.15e-34,66;CL:0002087,7.80e-31,115;CL:0000763,3.48e-28,108;CL:0000049,3.48e-28,108;CL:0000037,6.41e-28,168;CL:0002031,7.86e-27,120;CL:0002032,2.90e-25,161;CL:0000837,2.90e-25,161;CL:0000988,1.94e-24,177;CL:0000451,6.57e-09,10;CL:0000094,4.01e-08,8;CL:0002393,8.18e-08,9;CL:0002397,8.18e-08,9;CL:0000990,1.37e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.39e-26;42!CL:0000049;2.39e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.46e-32!102;UBERON:0003061!1.46e-32!102;UBERON:0007023!2.21e-29!115;UBERON:0002193!4.07e-28!112;UBERON:0002371!9.34e-27!80;UBERON:0001474!2.55e-23!86;UBERON:0002405!1.46e-19!115;UBERON:0004765!2.99e-19!101;UBERON:0001434!2.99e-19!101;UBERON:0000062!1.90e-10!511;UBERON:0001049!8.85e-07!57;UBERON:0005068!8.85e-07!57;UBERON:0006241!8.85e-07!57;UBERON:0007135!8.85e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.83e-07;114!UBERON:0000178;3.21e-07;15!UBERON:0000179;3.21e-07;15!UBERON:0000463;3.21e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.68e-38,98;UBERON:0003061,1.68e-38,98;UBERON:0002193,3.92e-34,108;UBERON:0002371,4.67e-31,76;UBERON:0007023,4.57e-29,114;UBERON:0002405,1.02e-27,93;UBERON:0001474,1.45e-27,82;UBERON:0004765,2.48e-24,90;UBERON:0001434,2.89e-19,100;UBERON:0003081,1.23e-09,203;UBERON:0000178,3.24e-07,15;UBERON:0000179,3.24e-07,15;UBERON:0000463,3.24e-07,15 | |||
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| |||
|short_description=p1@RBM47 | |||
}} |
Revision as of 10:54, 13 September 2013
Short description: | p1@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RBM47_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000505414_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | D6R9M7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.27e-42 | 72 |
macrophage dendritic cell progenitor | 2.00e-41 | 61 |
defensive cell | 7.69e-41 | 48 |
phagocyte | 7.69e-41 | 48 |
monopoietic cell | 5.94e-40 | 59 |
monocyte | 5.94e-40 | 59 |
monoblast | 5.94e-40 | 59 |
promonocyte | 5.94e-40 | 59 |
leukocyte | 1.03e-38 | 136 |
granulocyte monocyte progenitor cell | 6.81e-38 | 67 |
classical monocyte | 3.04e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.04e-36 | 42 |
myeloid lineage restricted progenitor cell | 7.15e-34 | 66 |
nongranular leukocyte | 7.80e-31 | 115 |
myeloid cell | 3.48e-28 | 108 |
common myeloid progenitor | 3.48e-28 | 108 |
hematopoietic stem cell | 6.41e-28 | 168 |
hematopoietic lineage restricted progenitor cell | 7.86e-27 | 120 |
hematopoietic oligopotent progenitor cell | 2.90e-25 | 161 |
hematopoietic multipotent progenitor cell | 2.90e-25 | 161 |
hematopoietic cell | 1.94e-24 | 177 |
dendritic cell | 6.57e-09 | 10 |
granulocyte | 4.01e-08 | 8 |
intermediate monocyte | 8.18e-08 | 9 |
CD14-positive, CD16-positive monocyte | 8.18e-08 | 9 |
conventional dendritic cell | 1.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.68e-38 | 98 |
blood island | 1.68e-38 | 98 |
hemolymphoid system | 3.92e-34 | 108 |
bone marrow | 4.67e-31 | 76 |
adult organism | 4.57e-29 | 114 |
immune system | 1.02e-27 | 93 |
bone element | 1.45e-27 | 82 |
skeletal element | 2.48e-24 | 90 |
skeletal system | 2.89e-19 | 100 |
lateral plate mesoderm | 1.23e-09 | 203 |
blood | 3.24e-07 | 15 |
haemolymphatic fluid | 3.24e-07 | 15 |
organism substance | 3.24e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.