FFCP PHASE1:Hg19::chr4:40198642..40198689,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=399|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=686|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000514143,ENST00000515503,ENST00000515702,ENST00000515718_5end|coexpression_cluster_id=C871|description=CAGE_peak_1_at_RHOH_5end|id=chr4:40198642..40198689,+|ontology_enrichment_celltype=CL:0000037!1.87e-64!172;CL:0000566!1.87e-64!172;CL:0002032!3.86e-59!165;CL:0000837!3.86e-59!165;CL:0000988!6.23e-58!182;CL:0000738!2.92e-55!140;CL:0002031!8.73e-45!124;CL:0002087!8.36e-43!119;CL:0000542!4.03e-34!53;CL:0000051!4.03e-34!53;CL:0000838!1.27e-33!52;CL:0000763!3.35e-25!112;CL:0000049!3.35e-25!112;CL:0000084!3.46e-17!25;CL:0000827!3.46e-17!25;CL:0000766!7.34e-17!76;CL:0000945!4.92e-15!24;CL:0000826!4.92e-15!24;CL:0000791!1.27e-14!18;CL:0000789!1.27e-14!18;CL:0002420!1.27e-14!18;CL:0002419!1.27e-14!18;CL:0000790!1.27e-14!18;CL:0000557!9.80e-14!71;CL:0000839!1.61e-13!70;CL:0002057!7.57e-13!42;CL:0000860!1.44e-11!45;CL:0000236!2.22e-11!14;CL:0002009!5.92e-11!65;CL:0002194!1.74e-10!63;CL:0000576!1.74e-10!63;CL:0000040!1.74e-10!63;CL:0000559!1.74e-10!63;CL:0000625!1.56e-09!11;CL:0000134!9.96e-08!358;CL:0002320!7.97e-07!365|ontology_enrichment_celltype_v019=CL:0000542;1.57e-22;53!CL:0000084;6.85e-19;25!CL:0000945;2.04e-17;24!CL:0000791;9.06e-17;18!CL:0000789;9.06e-17;18!CL:0002419;9.06e-17;18!CL:0002087;8.90e-15;104!CL:0000236;1.77e-12;13!CL:0000738;3.54e-12;136!CL:0000860;3.86e-12;33!CL:0002057;3.86e-12;33!CL:0000625;7.56e-11;11!CL:0000988;1.13e-10;177!CL:0000473;4.91e-08;39!CL:0000234;4.91e-08;39!CL:0000763;7.57e-08;100!CL:0000576;1.62e-07;48!CL:0000624;2.89e-07;6!CL:0000766;3.70e-07;69|ontology_enrichment_celltype_v019_2=CL:0000037,2.75e-68,168;CL:0002032,2.85e-62,161;CL:0000837,2.85e-62,161;CL:0000988,5.06e-62,177;CL:0000738,1.80e-59,136;CL:0002031,1.63e-47,120;CL:0002087,3.05e-45,115;CL:0000542,8.71e-39,53;CL:0000051,8.71e-39,53;CL:0000838,3.33e-38,52;CL:0000763,1.14e-24,108;CL:0000049,1.14e-24,108;CL:0000084,6.88e-19,25;CL:0000827,6.88e-19,25;CL:0000945,2.10e-17,24;CL:0000826,2.10e-17,24;CL:0000791,9.04e-17,18;CL:0000789,9.04e-17,18;CL:0002420,9.04e-17,18;CL:0002419,9.04e-17,18;CL:0000790,9.04e-17,18;CL:0000766,2.09e-16,72;CL:0000236,5.42e-13,14;CL:0000557,5.76e-13,67;CL:0000839,1.01e-12,66;CL:0000860,2.32e-11,42;CL:0002057,2.32e-11,42;CL:0000134,5.01e-11,354;CL:0000625,7.64e-11,11;CL:0002320,4.52e-10,361;CL:0002009,6.19e-10,61;CL:0002194,2.03e-09,59;CL:0000576,2.03e-09,59;CL:0000040,2.03e-09,59;CL:0000559,2.03e-09,59;CL:0000473,2.92e-09,48;CL:0000234,2.92e-09,48;CL:0000219,1.66e-07,386;CL:0000624,2.90e-07,6|ontology_enrichment_development_v019=CL:0000051;1.57e-22;53!CL:0000790;9.06e-17;18!CL:0002057;7.38e-09;42|ontology_enrichment_disease=DOID:2531!8.57e-11!51;DOID:0060083!8.57e-11!51;DOID:1240!2.81e-08!39|ontology_enrichment_disease_v019=DOID:2531;2.68e-07;51!DOID:0060083;2.68e-07;51|ontology_enrichment_disease_v019_2=DOID:2531,3.38e-11,51;DOID:0060083,3.38e-11,51;DOID:1240,4.54e-08,39|ontology_enrichment_uberon=UBERON:0007023!3.15e-19!115;UBERON:0002390!1.77e-18!102;UBERON:0003061!1.77e-18!102;UBERON:0002193!6.73e-17!112;UBERON:0002371!7.96e-11!80;UBERON:0002405!6.03e-10!115;UBERON:0001474!2.50e-09!86|ontology_enrichment_uberon_v019=UBERON:0000178;2.60e-07;15!UBERON:0000179;2.60e-07;15!UBERON:0000463;2.60e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.50e-19,98;UBERON:0003061,2.50e-19,98;UBERON:0002193,3.24e-17,108;UBERON:0002405,4.88e-12,93;UBERON:0002371,1.71e-10,76;UBERON:0002384,8.47e-10,371;UBERON:0001474,3.27e-09,82;UBERON:0007023,7.51e-08,114;UBERON:0000178,2.59e-07,15;UBERON:0000179,2.59e-07,15;UBERON:0000463,2.59e-07,15;UBERON:0004765,3.27e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.3798419914348,53.3653831424647,48.3284197265991,223.430909250177,166.965788172288,57.5915978735803,0,0,0,99.9326887485891,77.3400624731573,62.5368935783225,63.7094719811659,94.2558903109666,91.5785874420895,3.58264758783879,17.8141516310439,3.34848237924443,1.74477886535478,6.42389104270976,2.18325655069035,3.48643555358527,6.16751832032739,4.95530193432166,55.8123241104972,39.7049095120106,70.2352222769098,14.8240642716746,12.2642089880927,18.9597081232078,2.44715041405386,6.82265375144614,2.9214052977861,11.9372718024652,19.5766706516417,17.2621023965741,20.1209293113897,27.7254484094068,33.6717552920828,5.22376629531451,9.64554881974938,10.5879782329248,40.9535324368492,42.7615993104565,65.5910311009452,10.2917915447673,17.3090488914155,9.17740923578565,0.422510572623884,0.212604299965044,0.419317291016752,0.336985893439485,0,1.12507910687956,0.285012743741249,0,0.547992461293902,207.675568464361,182.410296161552,187.68645256521,246.650068643441,232.630068467923,197.714839344342,179.143160524698,218.478309788598,566.936117233011,671.799344640354,653.304946866016,137.458181722187,209.069693992113,36.8737718685108,517.543405169495,435.062914363325,356.10179626715,178.053617591072,461.831851819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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=399 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000514143,ENST00000515503,ENST00000515702,ENST00000515718_5end | |||
|coexpression_cluster_id=C871 | |||
|description=CAGE_peak_1_at_RHOH_5end | |||
|id=chr4:40198642..40198689,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.87e-64!172;CL:0000566!1.87e-64!172;CL:0002032!3.86e-59!165;CL:0000837!3.86e-59!165;CL:0000988!6.23e-58!182;CL:0000738!2.92e-55!140;CL:0002031!8.73e-45!124;CL:0002087!8.36e-43!119;CL:0000542!4.03e-34!53;CL:0000051!4.03e-34!53;CL:0000838!1.27e-33!52;CL:0000763!3.35e-25!112;CL:0000049!3.35e-25!112;CL:0000084!3.46e-17!25;CL:0000827!3.46e-17!25;CL:0000766!7.34e-17!76;CL:0000945!4.92e-15!24;CL:0000826!4.92e-15!24;CL:0000791!1.27e-14!18;CL:0000789!1.27e-14!18;CL:0002420!1.27e-14!18;CL:0002419!1.27e-14!18;CL:0000790!1.27e-14!18;CL:0000557!9.80e-14!71;CL:0000839!1.61e-13!70;CL:0002057!7.57e-13!42;CL:0000860!1.44e-11!45;CL:0000236!2.22e-11!14;CL:0002009!5.92e-11!65;CL:0002194!1.74e-10!63;CL:0000576!1.74e-10!63;CL:0000040!1.74e-10!63;CL:0000559!1.74e-10!63;CL:0000625!1.56e-09!11;CL:0000134!9.96e-08!358;CL:0002320!7.97e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.57e-22;53!CL:0000084;6.85e-19;25!CL:0000945;2.04e-17;24!CL:0000791;9.06e-17;18!CL:0000789;9.06e-17;18!CL:0002419;9.06e-17;18!CL:0002087;8.90e-15;104!CL:0000236;1.77e-12;13!CL:0000738;3.54e-12;136!CL:0000860;3.86e-12;33!CL:0002057;3.86e-12;33!CL:0000625;7.56e-11;11!CL:0000988;1.13e-10;177!CL:0000473;4.91e-08;39!CL:0000234;4.91e-08;39!CL:0000763;7.57e-08;100!CL:0000576;1.62e-07;48!CL:0000624;2.89e-07;6!CL:0000766;3.70e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.75e-68,168;CL:0002032,2.85e-62,161;CL:0000837,2.85e-62,161;CL:0000988,5.06e-62,177;CL:0000738,1.80e-59,136;CL:0002031,1.63e-47,120;CL:0002087,3.05e-45,115;CL:0000542,8.71e-39,53;CL:0000051,8.71e-39,53;CL:0000838,3.33e-38,52;CL:0000763,1.14e-24,108;CL:0000049,1.14e-24,108;CL:0000084,6.88e-19,25;CL:0000827,6.88e-19,25;CL:0000945,2.10e-17,24;CL:0000826,2.10e-17,24;CL:0000791,9.04e-17,18;CL:0000789,9.04e-17,18;CL:0002420,9.04e-17,18;CL:0002419,9.04e-17,18;CL:0000790,9.04e-17,18;CL:0000766,2.09e-16,72;CL:0000236,5.42e-13,14;CL:0000557,5.76e-13,67;CL:0000839,1.01e-12,66;CL:0000860,2.32e-11,42;CL:0002057,2.32e-11,42;CL:0000134,5.01e-11,354;CL:0000625,7.64e-11,11;CL:0002320,4.52e-10,361;CL:0002009,6.19e-10,61;CL:0002194,2.03e-09,59;CL:0000576,2.03e-09,59;CL:0000040,2.03e-09,59;CL:0000559,2.03e-09,59;CL:0000473,2.92e-09,48;CL:0000234,2.92e-09,48;CL:0000219,1.66e-07,386;CL:0000624,2.90e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.57e-22;53!CL:0000790;9.06e-17;18!CL:0002057;7.38e-09;42 | |||
|ontology_enrichment_disease=DOID:2531!8.57e-11!51;DOID:0060083!8.57e-11!51;DOID:1240!2.81e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.68e-07;51!DOID:0060083;2.68e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.38e-11,51;DOID:0060083,3.38e-11,51;DOID:1240,4.54e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.15e-19!115;UBERON:0002390!1.77e-18!102;UBERON:0003061!1.77e-18!102;UBERON:0002193!6.73e-17!112;UBERON:0002371!7.96e-11!80;UBERON:0002405!6.03e-10!115;UBERON:0001474!2.50e-09!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.60e-07;15!UBERON:0000179;2.60e-07;15!UBERON:0000463;2.60e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.50e-19,98;UBERON:0003061,2.50e-19,98;UBERON:0002193,3.24e-17,108;UBERON:0002405,4.88e-12,93;UBERON:0002371,1.71e-10,76;UBERON:0002384,8.47e-10,371;UBERON:0001474,3.27e-09,82;UBERON:0007023,7.51e-08,114;UBERON:0000178,2.59e-07,15;UBERON:0000179,2.59e-07,15;UBERON:0000463,2.59e-07,15;UBERON:0004765,3.27e-07,90 | |||
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| |||
|short_description=p1@RHOH | |||
}} |
Revision as of 10:52, 13 September 2013
Short description: | p1@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RHOH_5end |
Coexpression cluster: | C871_CD19_Mast_CD4_CD8_Natural_Peripheral_Basophils |
Association with transcript: | 0bp_to_ENST00000514143, ENST00000515503, ENST00000515702, ENST00000515718_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.50e-19 | 98 |
blood island | 2.50e-19 | 98 |
hemolymphoid system | 3.24e-17 | 108 |
immune system | 4.88e-12 | 93 |
bone marrow | 1.71e-10 | 76 |
connective tissue | 8.47e-10 | 371 |
bone element | 3.27e-09 | 82 |
adult organism | 7.51e-08 | 114 |
blood | 2.59e-07 | 15 |
haemolymphatic fluid | 2.59e-07 | 15 |
organism substance | 2.59e-07 | 15 |
skeletal element | 3.27e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.38e-11 | 51 |
immune system cancer | 3.38e-11 | 51 |
leukemia | 4.54e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.