FFCP PHASE1:Hg19::chr4:39512064..39512077,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7358|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=12525|TSSclassifier=S|UniProt=O60701|association_with_transcript=-68bp_to_AF049126_5end|description=CAGE_peak_11_at_UGDH_5end|id=chr4:39512064..39512077,-|ontology_enrichment_celltype=CL:0000055!3.91e-08!180;CL:0000057!9.08e-07!75|ontology_enrichment_celltype_v019=CL:0002570;5.37e-09;8!CL:0000511;1.05e-08;1!CL:0002625;1.05e-08;1!CL:0000216;1.05e-08;1!CL:0002591;1.05e-08;1!CL:0002379;1.05e-08;1|ontology_enrichment_celltype_v019_2=CL:0002379,4.89e-09,1;CL:0000511,6.16e-09,1;CL:0002625,6.16e-09,1;CL:0000216,6.16e-09,1;CL:0002570,6.17e-09,8;CL:0002591,1.42e-08,1;CL:0000136,2.91e-08,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3620;1.05e-08;1!DOID:3565;1.05e-08;1|ontology_enrichment_disease_v019_2=DOID:3620,4.89e-09,1;DOID:3565,4.89e-09,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001136;1.05e-08;1!UBERON:0001343;1.05e-08;1!UBERON:0004910;1.05e-08;1!UBERON:0004813;1.05e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.16e-09,1;UBERON:0001343,6.16e-09,1;UBERON:0004910,6.16e-09,1;UBERON:0005154,6.16e-09,1;UBERON:0005295,6.16e-09,1;UBERON:0004813,6.16e-09,1;UBERON:0005297,6.16e-09,1;UBERON:0005294,6.16e-09,1;UBERON:0010141,6.16e-09,1;UBERON:0005891,6.16e-09,1|phase1_expression=1.45342703416445,0.214100523890983,0.140954404095971,2.00146596706261,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0,0.618831764800233,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.152826811495903,0,0,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,2.1686349143074,0,0.579386075843295,0,0,0,0.443458794925128,0.351339142772504,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.709336764396714,1.68203280042692,1.06748995729705,0.24666754841716,0,0.269421344139376,0,0.151357427644931,0.576175924479999,0,0,0,0.597794722207204,0.117434498643765,0.485618833104395,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,0,0.741800787835671,0,0,0.336672227908132,0.375355559615893,0.554128230968366,0,0.612975591598039,0,0.680593098960126,0,0.85422955527427,0,0.900273288253207,0.412210116953756,0,0,0,0.194874010322397,0.252433774244115,0,0.161646056818812,0,0.201504196455281,0,0,0,0,0.121973706129595,0,0.348581828608555,0.310983165046111,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.591534000199219,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,2.53510069643662,0,0.590789906681404,0,0.614942192715568,0,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0.335964256397719,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.517086863031111,0,0,0.26593811658487,0,0.514414748524284,0,0,0,0,0.823240336780769,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0.718874566474748,0,0,0.289562613335158,1.02738161275192,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.542530047399471,0.623912584592421,1.42743191037729,0.157702415033935,0.234282829985426,0,0,0,0,0.184369168541703,0.781952530212746,0,0,0,0,0.106727557803444,0,0,0,0.496215615637554,0,0.841980283299221,0.384417447767103,0,0.160853921143607,0,1.23367755042124,0.710246901252508,0.492762936082855,0,0.348631135379878,0.362578348774867,0.40101294060657,0,0.34444334449382,0.728364672026868,0.393373244878272,0,0.462092022626489,0,0,0.211103257785751,0,0.340187410553031,0.431831832204279,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0,0,0,1.6068392984416,0.096670718292122,0.770243085573222,0.921022048356777,0.275673144969061,0.322260734604821,0.435050081742686,0.426133137080504,0.0890320356467374,0.330569830721956,0,0,0.50578890427775,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.272999822815972,0.707027159768564,1.13008116620243,0.551365343546124,0,0,0,1.31178950409327,0,0.30982349809975,0.845086807596724,0,0.0982490410131212,0,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.1858031751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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12525 | |||
|TSSclassifier=S | |||
|UniProt=O60701 | |||
|association_with_transcript=-68bp_to_AF049126_5end | |||
|description=CAGE_peak_11_at_UGDH_5end | |||
|id=chr4:39512064..39512077,- | |||
|ontology_enrichment_celltype=CL:0000055!3.91e-08!180;CL:0000057!9.08e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002570;5.37e-09;8!CL:0000511;1.05e-08;1!CL:0002625;1.05e-08;1!CL:0000216;1.05e-08;1!CL:0002591;1.05e-08;1!CL:0002379;1.05e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,4.89e-09,1;CL:0000511,6.16e-09,1;CL:0002625,6.16e-09,1;CL:0000216,6.16e-09,1;CL:0002570,6.17e-09,8;CL:0002591,1.42e-08,1;CL:0000136,2.91e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;1.05e-08;1!DOID:3565;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,4.89e-09,1;DOID:3565,4.89e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.05e-08;1!UBERON:0001343;1.05e-08;1!UBERON:0004910;1.05e-08;1!UBERON:0004813;1.05e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.16e-09,1;UBERON:0001343,6.16e-09,1;UBERON:0004910,6.16e-09,1;UBERON:0005154,6.16e-09,1;UBERON:0005295,6.16e-09,1;UBERON:0004813,6.16e-09,1;UBERON:0005297,6.16e-09,1;UBERON:0005294,6.16e-09,1;UBERON:0010141,6.16e-09,1;UBERON:0005891,6.16e-09,1 | |||
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| |||
|short_description=p11@UGDH | |||
}} |
Revision as of 10:50, 13 September 2013
Short description: | p11@UGDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_UGDH_5end |
Coexpression cluster: | NA |
Association with transcript: | -68bp_to_AF049126_5end |
EntrezGene: | UGDH |
HGNC: | 12525 |
UniProt: | O60701 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 4.89e-09 | 1 |
androgen binding protein secreting cell | 6.16e-09 | 1 |
seminiferous tubule epithelial cell | 6.16e-09 | 1 |
Sertoli cell | 6.16e-09 | 1 |
mesenchymal stem cell of adipose | 6.17e-09 | 8 |
smooth muscle cell of the pulmonary artery | 1.42e-08 | 1 |
fat cell | 2.91e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.16e-09 | 1 |
seminiferous tubule of testis | 6.16e-09 | 1 |
epithelium of male gonad | 6.16e-09 | 1 |
epithelial cord | 6.16e-09 | 1 |
sex cord | 6.16e-09 | 1 |
seminiferous tubule epithelium | 6.16e-09 | 1 |
testis sex cord | 6.16e-09 | 1 |
genital ridge | 6.16e-09 | 1 |
primitive sex cord of indifferent gonad | 6.16e-09 | 1 |
coelomic epithelium | 6.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 4.89e-09 | 1 |
meningioma | 4.89e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.