FFCP PHASE1:Hg19::chr4:3372015..3372020,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6002|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9994|TSSclassifier=S|UniProt=|association_with_transcript=102bp_to_ENST00000506998_5end|coexpression_cluster_id=C80|description=CAGE_peak_33_at_RGS12_5end|id=chr4:3372015..3372020,+|ontology_enrichment_celltype=CL:0002057!1.92e-16!42;CL:0000860!3.72e-15!45;CL:0002009!5.32e-13!65;CL:0000557!1.23e-11!71;CL:0001014!4.35e-11!2;CL:0001016!4.35e-11!2;CL:0002194!8.01e-10!63;CL:0000576!8.01e-10!63;CL:0000040!8.01e-10!63;CL:0000559!8.01e-10!63;CL:0000766!4.40e-09!76;CL:0002393!1.32e-08!9;CL:0002397!1.32e-08!9;CL:0000839!1.38e-08!70;CL:0000763!2.86e-07!112;CL:0000049!2.86e-07!112;CL:0000842!4.39e-07!3;CL:0000738!7.28e-07!140|ontology_enrichment_celltype_v019=CL:0001014;3.61e-34;2!CL:0001016;3.61e-34;2!CL:0000453;1.40e-14;5!CL:0000840;2.19e-12;5!CL:0000990;1.04e-08;8!CL:0000451;2.32e-07;10|ontology_enrichment_celltype_v019_2=CL:0001014,3.61e-34,2;CL:0001016,3.61e-34,2;CL:0000453,1.40e-14,5;CL:0000840,2.19e-12,5;CL:0001029,2.19e-12,5;CL:0000990,1.04e-08,8;CL:0000451,2.32e-07,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000200!1.19e-18!6;UBERON:0002619!5.72e-18!22;UBERON:0001950!5.40e-16!20;UBERON:0000956!1.12e-15!25;UBERON:0000203!1.12e-15!25;UBERON:0001869!1.94e-14!32;UBERON:0002771!3.50e-14!3;UBERON:0001871!5.35e-14!7;UBERON:0002020!1.53e-13!34;UBERON:0003528!1.53e-13!34;UBERON:0001893!1.72e-13!34;UBERON:0002791!1.51e-11!33;UBERON:0002780!6.95e-11!41;UBERON:0001890!6.95e-11!41;UBERON:0006240!6.95e-11!41;UBERON:0002390!9.18e-11!102;UBERON:0003061!9.18e-11!102;UBERON:0002193!1.07e-10!112;UBERON:0003080!1.39e-10!42;UBERON:0001474!2.12e-10!86;UBERON:0001049!2.38e-10!57;UBERON:0005068!2.38e-10!57;UBERON:0006241!2.38e-10!57;UBERON:0007135!2.38e-10!57;UBERON:0002371!5.66e-10!80;UBERON:0002616!6.46e-10!59;UBERON:0004765!1.42e-09!101;UBERON:0001434!1.42e-09!101;UBERON:0001017!7.80e-09!82;UBERON:0005743!2.72e-08!86;UBERON:0000955!5.62e-08!69;UBERON:0006238!5.62e-08!69;UBERON:0002405!5.87e-08!115;UBERON:0000073!3.07e-07!94;UBERON:0001016!3.07e-07!94;UBERON:0003075!3.72e-07!86;UBERON:0007284!3.72e-07!86|ontology_enrichment_uberon_v019=UBERON:0001872;1.71e-14;5|ontology_enrichment_uberon_v019_2=UBERON:0001872,1.83e-14,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0.290796477559129,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,1.27867425159808,0,0.398927315243264,0.426224750532694,0,0,0,0,0,0.434377689410233,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,3.59958226482401,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p33@RGS12}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9994 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=102bp_to_ENST00000506998_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_33_at_RGS12_5end | |||
|id=chr4:3372015..3372020,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.92e-16!42;CL:0000860!3.72e-15!45;CL:0002009!5.32e-13!65;CL:0000557!1.23e-11!71;CL:0001014!4.35e-11!2;CL:0001016!4.35e-11!2;CL:0002194!8.01e-10!63;CL:0000576!8.01e-10!63;CL:0000040!8.01e-10!63;CL:0000559!8.01e-10!63;CL:0000766!4.40e-09!76;CL:0002393!1.32e-08!9;CL:0002397!1.32e-08!9;CL:0000839!1.38e-08!70;CL:0000763!2.86e-07!112;CL:0000049!2.86e-07!112;CL:0000842!4.39e-07!3;CL:0000738!7.28e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.61e-34;2!CL:0001016;3.61e-34;2!CL:0000453;1.40e-14;5!CL:0000840;2.19e-12;5!CL:0000990;1.04e-08;8!CL:0000451;2.32e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.61e-34,2;CL:0001016,3.61e-34,2;CL:0000453,1.40e-14,5;CL:0000840,2.19e-12,5;CL:0001029,2.19e-12,5;CL:0000990,1.04e-08,8;CL:0000451,2.32e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!1.19e-18!6;UBERON:0002619!5.72e-18!22;UBERON:0001950!5.40e-16!20;UBERON:0000956!1.12e-15!25;UBERON:0000203!1.12e-15!25;UBERON:0001869!1.94e-14!32;UBERON:0002771!3.50e-14!3;UBERON:0001871!5.35e-14!7;UBERON:0002020!1.53e-13!34;UBERON:0003528!1.53e-13!34;UBERON:0001893!1.72e-13!34;UBERON:0002791!1.51e-11!33;UBERON:0002780!6.95e-11!41;UBERON:0001890!6.95e-11!41;UBERON:0006240!6.95e-11!41;UBERON:0002390!9.18e-11!102;UBERON:0003061!9.18e-11!102;UBERON:0002193!1.07e-10!112;UBERON:0003080!1.39e-10!42;UBERON:0001474!2.12e-10!86;UBERON:0001049!2.38e-10!57;UBERON:0005068!2.38e-10!57;UBERON:0006241!2.38e-10!57;UBERON:0007135!2.38e-10!57;UBERON:0002371!5.66e-10!80;UBERON:0002616!6.46e-10!59;UBERON:0004765!1.42e-09!101;UBERON:0001434!1.42e-09!101;UBERON:0001017!7.80e-09!82;UBERON:0005743!2.72e-08!86;UBERON:0000955!5.62e-08!69;UBERON:0006238!5.62e-08!69;UBERON:0002405!5.87e-08!115;UBERON:0000073!3.07e-07!94;UBERON:0001016!3.07e-07!94;UBERON:0003075!3.72e-07!86;UBERON:0007284!3.72e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;1.71e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,1.83e-14,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0.290796477559129,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,1.27867425159808,0,0.398927315243264,0.426224750532694,0,0,0,0,0,0.434377689410233,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,3.59958226482401,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p33@RGS12 | |||
}} |
Revision as of 10:43, 13 September 2013
Short description: | p33@RGS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_33_at_RGS12_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 102bp_to_ENST00000506998_5end |
EntrezGene: | RGS12 |
HGNC: | 9994 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.61e-34 | 2 |
immature CD1a-positive Langerhans cell | 3.61e-34 | 2 |
Langerhans cell | 1.40e-14 | 5 |
immature conventional dendritic cell | 2.19e-12 | 5 |
common dendritic progenitor | 2.19e-12 | 5 |
conventional dendritic cell | 1.04e-08 | 8 |
dendritic cell | 2.32e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 1.83e-14 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.