FFCP PHASE1:Hg19::chr4:2800722..2800793,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6452|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10825|TSSclassifier=S|UniProt=D6RER9|association_with_transcript=0bp_to_ENST00000508385_5end|coexpression_cluster_id=C26|description=CAGE_peak_6_at_SH3BP2_5end|id=chr4:2800722..2800793,+|ontology_enrichment_celltype=CL:0000738!2.16e-58!140;CL:0000037!7.78e-49!172;CL:0000566!7.78e-49!172;CL:0000988!7.01e-47!182;CL:0002032!5.19e-46!165;CL:0000837!5.19e-46!165;CL:0002031!2.17e-45!124;CL:0000766!1.04e-44!76;CL:0002087!1.10e-44!119;CL:0000557!1.79e-38!71;CL:0000839!2.00e-36!70;CL:0002009!2.34e-36!65;CL:0002057!2.42e-35!42;CL:0002194!2.69e-35!63;CL:0000576!2.69e-35!63;CL:0000040!2.69e-35!63;CL:0000559!2.69e-35!63;CL:0000763!2.75e-35!112;CL:0000049!2.75e-35!112;CL:0000860!5.16e-35!45;CL:0000542!1.01e-09!53;CL:0000051!1.01e-09!53;CL:0000838!1.24e-09!52;CL:0002393!2.24e-08!9;CL:0002397!2.24e-08!9;CL:0000094!1.98e-07!8|ontology_enrichment_celltype_v019=CL:0000860;1.25e-39;33!CL:0002057;1.25e-39;33!CL:0000473;1.85e-38;39!CL:0000234;1.85e-38;39!CL:0000576;7.55e-32;48!CL:0000766;4.51e-30;69!CL:0000738;2.39e-15;136!CL:0002087;5.64e-15;104!CL:0000763;1.99e-13;100!CL:0000094;8.63e-11;8!CL:0000988;7.84e-10;177!CL:0000945;8.13e-10;24!CL:0000081;8.14e-09;11!CL:0002393;8.72e-09;6!CL:0002397;8.72e-09;6!CL:0000236;4.88e-08;13!CL:0000235;7.75e-08;6!CL:0000219;3.95e-07;193|ontology_enrichment_celltype_v019_2=CL:0000738,6.03e-66,136;CL:0000766,1.25e-65,72;CL:0000473,2.82e-61,48;CL:0000234,2.82e-61,48;CL:0000557,2.84e-56,67;CL:0000860,1.18e-54,42;CL:0002057,1.18e-54,42;CL:0000839,1.88e-53,66;CL:0002009,1.42e-52,61;CL:0002031,2.62e-51,120;CL:0000037,3.55e-51,168;CL:0002194,6.46e-51,59;CL:0000576,6.46e-51,59;CL:0000040,6.46e-51,59;CL:0000559,6.46e-51,59;CL:0000988,2.50e-50,177;CL:0002087,1.07e-48,115;CL:0002032,7.67e-48,161;CL:0000837,7.67e-48,161;CL:0000763,1.56e-45,108;CL:0000049,1.56e-45,108;CL:0002393,3.05e-12,9;CL:0002397,3.05e-12,9;CL:0000134,3.22e-11,354;CL:0000094,9.22e-11,8;CL:0002320,1.74e-10,361;CL:0000945,4.94e-10,24;CL:0000826,4.94e-10,24;CL:0000236,3.43e-09,14;CL:0000081,7.20e-09,11;CL:0000219,8.78e-09,386;CL:0000235,7.83e-08,6|ontology_enrichment_development_v019=CL:0002057;3.80e-39;42!CL:0000049;1.24e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.05e-43!102;UBERON:0003061!9.05e-43!102;UBERON:0002193!1.39e-38!112;UBERON:0002371!1.92e-31!80;UBERON:0001474!3.91e-27!86;UBERON:0002405!5.08e-22!115;UBERON:0004765!2.00e-19!101;UBERON:0001434!2.00e-19!101;UBERON:0000178!1.20e-10!15;UBERON:0000179!1.20e-10!15;UBERON:0000463!1.20e-10!15;UBERON:0003081!5.40e-10!216|ontology_enrichment_uberon_v019=UBERON:0000178;1.01e-15;15!UBERON:0000179;1.01e-15;15!UBERON:0000463;1.01e-15;15!UBERON:0002390;9.71e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.36e-59,98;UBERON:0003061,1.36e-59,98;UBERON:0002193,9.48e-55,108;UBERON:0002371,4.38e-47,76;UBERON:0001474,4.29e-42,82;UBERON:0002405,2.59e-40,93;UBERON:0004765,1.70e-36,90;UBERON:0001434,8.58e-31,100;UBERON:0003081,2.35e-19,203;UBERON:0000178,8.59e-16,15;UBERON:0000179,8.59e-16,15;UBERON:0000463,8.59e-16,15;UBERON:0002204,5.02e-11,167;UBERON:0002384,1.66e-09,371;UBERON:0000926,3.84e-08,315;UBERON:0004120,3.84e-08,315;UBERON:0006603,3.84e-08,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40547463227464,7.63535481884495,6.69041641166274,9.04737836752479,5.37361157336098,15.7912445782398,0.919421224478927,0,1.10926203050036,0,0,0,27.145775018062,45.7241340231923,26.4753262273339,1.11957737119962,0,1.54545340580512,56.123720168912,37.4097184251921,47.3038919316242,76.2367241050646,47.28430712251,42.1200664417341,37.1123186095574,27.921517011672,19.391542850864,57.5725286830153,45.8294125344517,29.7938270507552,58.1668829186649,37.6610487079827,25.8432007111847,66.114120752115,42.3626315740444,39.6389017995406,24.7388475140037,16.5554835825954,12.3605177654481,112.310975349262,79.4339314567596,64.7735138955398,44.973511080957,30.2460092683717,22.1532621599219,72.6479403160043,54.5050901261596,30.063926806884,19.0129757680748,31.2528320948614,12.7891773760109,19.4328531883437,16.9699888910902,9.00063285503649,26.7911979116774,36.7995852818317,10.7771850721134,3.51992488922645,4.36910889009705,3.55803701545422,2.56038133539904,1.60158394814405,2.87376219977242,1.98313461835459,1.90810750907073,6.83055562931338,6.45960908308033,4.58727873750275,0,8.96813700770458,0.263384084775077,0.196709770113833,1.17903228824749,0.616804496998528,0.83593247695339,0.32592226663359,1.4203434172042,0,4.01077644786625,0.294605907474837,1.32920336750173,0,1.28091319725675,0.520237390239513,1.31550323682941,0.276350017785848,1.73881851441031,0.14828656316206,0.267540828089713,0,1.47302145506836,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0,2.55977702432214,0.76791966692651,0,2.36777252044017,0.821127996921047,0.403213486449465,0.534880391567015,0.28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69052,0,0,0,0.458729283404541,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,1.21245917149183,0.267964130156178,0,0,1.27940389140589,0,0.322944549180031,0.372448285775147,0,0.0636471582781649,1.21270313374932,0.870866991587845,0.342233301085281,3.16554649168561,1.5061663132462,0.332660356546013,0,0,0,16.7973127939317,0,0.488965776731466,1.22068853494722,2.66302709674205,2.01273793591026,16.9901300920713|short_description=p6@SH3BP2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6452 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10825 | |||
|TSSclassifier=S | |||
|UniProt=D6RER9 | |||
|association_with_transcript=0bp_to_ENST00000508385_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_6_at_SH3BP2_5end | |||
|id=chr4:2800722..2800793,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.16e-58!140;CL:0000037!7.78e-49!172;CL:0000566!7.78e-49!172;CL:0000988!7.01e-47!182;CL:0002032!5.19e-46!165;CL:0000837!5.19e-46!165;CL:0002031!2.17e-45!124;CL:0000766!1.04e-44!76;CL:0002087!1.10e-44!119;CL:0000557!1.79e-38!71;CL:0000839!2.00e-36!70;CL:0002009!2.34e-36!65;CL:0002057!2.42e-35!42;CL:0002194!2.69e-35!63;CL:0000576!2.69e-35!63;CL:0000040!2.69e-35!63;CL:0000559!2.69e-35!63;CL:0000763!2.75e-35!112;CL:0000049!2.75e-35!112;CL:0000860!5.16e-35!45;CL:0000542!1.01e-09!53;CL:0000051!1.01e-09!53;CL:0000838!1.24e-09!52;CL:0002393!2.24e-08!9;CL:0002397!2.24e-08!9;CL:0000094!1.98e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-39;33!CL:0002057;1.25e-39;33!CL:0000473;1.85e-38;39!CL:0000234;1.85e-38;39!CL:0000576;7.55e-32;48!CL:0000766;4.51e-30;69!CL:0000738;2.39e-15;136!CL:0002087;5.64e-15;104!CL:0000763;1.99e-13;100!CL:0000094;8.63e-11;8!CL:0000988;7.84e-10;177!CL:0000945;8.13e-10;24!CL:0000081;8.14e-09;11!CL:0002393;8.72e-09;6!CL:0002397;8.72e-09;6!CL:0000236;4.88e-08;13!CL:0000235;7.75e-08;6!CL:0000219;3.95e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.03e-66,136;CL:0000766,1.25e-65,72;CL:0000473,2.82e-61,48;CL:0000234,2.82e-61,48;CL:0000557,2.84e-56,67;CL:0000860,1.18e-54,42;CL:0002057,1.18e-54,42;CL:0000839,1.88e-53,66;CL:0002009,1.42e-52,61;CL:0002031,2.62e-51,120;CL:0000037,3.55e-51,168;CL:0002194,6.46e-51,59;CL:0000576,6.46e-51,59;CL:0000040,6.46e-51,59;CL:0000559,6.46e-51,59;CL:0000988,2.50e-50,177;CL:0002087,1.07e-48,115;CL:0002032,7.67e-48,161;CL:0000837,7.67e-48,161;CL:0000763,1.56e-45,108;CL:0000049,1.56e-45,108;CL:0002393,3.05e-12,9;CL:0002397,3.05e-12,9;CL:0000134,3.22e-11,354;CL:0000094,9.22e-11,8;CL:0002320,1.74e-10,361;CL:0000945,4.94e-10,24;CL:0000826,4.94e-10,24;CL:0000236,3.43e-09,14;CL:0000081,7.20e-09,11;CL:0000219,8.78e-09,386;CL:0000235,7.83e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.80e-39;42!CL:0000049;1.24e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.05e-43!102;UBERON:0003061!9.05e-43!102;UBERON:0002193!1.39e-38!112;UBERON:0002371!1.92e-31!80;UBERON:0001474!3.91e-27!86;UBERON:0002405!5.08e-22!115;UBERON:0004765!2.00e-19!101;UBERON:0001434!2.00e-19!101;UBERON:0000178!1.20e-10!15;UBERON:0000179!1.20e-10!15;UBERON:0000463!1.20e-10!15;UBERON:0003081!5.40e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.01e-15;15!UBERON:0000179;1.01e-15;15!UBERON:0000463;1.01e-15;15!UBERON:0002390;9.71e-07;32 | |||
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| |||
|short_description=p6@SH3BP2 | |||
}} |
Revision as of 10:39, 13 September 2013
Short description: | p6@SH3BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SH3BP2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000508385_5end |
EntrezGene: | SH3BP2 |
HGNC: | 10825 |
UniProt: | D6RER9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.36e-59 | 98 |
blood island | 1.36e-59 | 98 |
hemolymphoid system | 9.48e-55 | 108 |
bone marrow | 4.38e-47 | 76 |
bone element | 4.29e-42 | 82 |
immune system | 2.59e-40 | 93 |
skeletal element | 1.70e-36 | 90 |
skeletal system | 8.58e-31 | 100 |
lateral plate mesoderm | 2.35e-19 | 203 |
blood | 8.59e-16 | 15 |
haemolymphatic fluid | 8.59e-16 | 15 |
organism substance | 8.59e-16 | 15 |
musculoskeletal system | 5.02e-11 | 167 |
connective tissue | 1.66e-09 | 371 |
mesoderm | 3.84e-08 | 315 |
mesoderm-derived structure | 3.84e-08 | 315 |
presumptive mesoderm | 3.84e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.