FFCP PHASE1:Hg19::chr4:1164925..1164936,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10417|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11253|TSSclassifier=S|UniProt=|association_with_transcript=-67bp_to_ENST00000509697_5end|coexpression_cluster_id=C574|description=CAGE_peak_11_at_SPON2_5end|id=chr4:1164925..1164936,-|ontology_enrichment_celltype=CL:0000136!1.53e-12!15;CL:0000048!1.82e-12!430;CL:0000057!4.67e-12!75;CL:0000723!6.65e-12!436;CL:0000034!3.51e-11!444;CL:0002334!1.14e-10!12;CL:0002320!2.57e-10!365;CL:0000134!4.72e-09!358;CL:0000055!7.25e-09!180;CL:0000219!1.17e-07!390;CL:0002371!3.01e-07!591|ontology_enrichment_celltype_v019=CL:0002622;2.58e-13;3!CL:0000135;2.72e-12;3!CL:0000388;2.72e-12;3!CL:0000134;2.92e-11;55!CL:0002569;5.85e-11;6!CL:0000048;2.59e-10;58!CL:0002617;4.78e-09;2!CL:0002583;9.31e-09;2!CL:0000723;1.98e-08;61!CL:0000034;2.77e-08;69!CL:0002334;5.03e-08;12!CL:0000136;6.44e-08;13!CL:0002504;8.01e-07;3!CL:1000279;8.01e-07;3!CL:1000280;8.01e-07;3!CL:0002615;9.22e-07;3|ontology_enrichment_celltype_v019_2=CL:0002622,3.00e-13,3;CL:0000136,1.20e-12,15;CL:0000135,3.26e-12,3;CL:0000388,3.26e-12,3;CL:0002569,6.69e-11,6;CL:0000048,1.09e-10,427;CL:0000723,2.09e-10,433;CL:0000034,4.84e-10,441;CL:0000134,2.01e-09,354;CL:0002617,2.99e-09,2;CL:0002320,4.50e-09,361;CL:0002583,8.27e-09,2;CL:0000219,1.41e-08,386;CL:0002334,4.45e-08,12;CL:0000057,3.40e-07,76;CL:0002504,7.81e-07,3;CL:1000279,7.81e-07,3;CL:1000280,7.81e-07,3;CL:0002615,9.77e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!4.15e-11!14|ontology_enrichment_disease_v019=DOID:2394;3.15e-13;14|ontology_enrichment_disease_v019_2=DOID:2394,4.56e-13,14|ontology_enrichment_uberon=UBERON:0002384!2.02e-09!375;UBERON:0001013!4.75e-09!14;UBERON:0003688!6.97e-09!6;UBERON:0002358!6.97e-09!6;UBERON:0003684!6.97e-09!6;UBERON:0001178!6.97e-09!6;UBERON:0000914!5.36e-08!83;UBERON:0002329!5.36e-08!83;UBERON:0003077!5.36e-08!83;UBERON:0003059!5.36e-08!83;UBERON:0007282!5.36e-08!83;UBERON:0009618!5.36e-08!83;UBERON:0007285!5.36e-08!83;UBERON:0002072!6.28e-08!5;UBERON:0003102!1.42e-07!95|ontology_enrichment_uberon_v019=UBERON:0007846;2.72e-12;3!UBERON:0000043;2.72e-12;3!UBERON:0007845;2.72e-12;3!UBERON:0003422;5.85e-11;6!UBERON:0003104;2.10e-09;7!UBERON:0009142;2.10e-09;7!UBERON:0002072;7.62e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.26e-12,3;UBERON:0000043,3.26e-12,3;UBERON:0007845,3.26e-12,3;UBERON:0003422,6.69e-11,6;UBERON:0002384,1.35e-08,371;UBERON:0002072,7.20e-08,5|phase1_expression=1.63510541343501,2.99740733447376,0.422863212287913,4.00293193412522,6.25745532198203,0.872338524100369,5.06599756336621,0.631719873426831,0.522371256399677,0,0,0,0,0.74259811776028,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,1.5608003841516,0,1.49448680551801,0.352303495931295,0,0.561803226808994,0,0.491337269247072,0.619954687054593,1.18800285728205,0.741800787835671,0,7.90479955997862,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0.600952235626387,0,0,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,3.85944562915731,0,0.464367928031979,7.21879481669586,0.118306800039844,0,0,0,0.435758888184812,0,0.134831308160164,0.196221465125346,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13217338068116,0.102827492703324,0.901029173531752,0,0,0,0,1.03417372606222,0,0.845302752556,0.797814349754612,4.16029747645464,0,0,0,0.428933980974443,2.71310802695722,2.46972101034231,0,1.06617584622764,1.58390374586686,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0.197030760201927,0.215627574859517,0.898401253958239,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0.426910231213777,0,0,0,0.496215615637554,0,2.80660094433074,0.640695746278505,0.511707249066704,0.804269605718038,0,1.07946785661859,1.77561725313127,0.0821271560138091,1.55776328755086,1.27831416305955,0,0,0,1.26295892981067,3.82391452814106,8.26083814244372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0.462145851343933,0.15350367472613,0.413509717453592,0.214840489736547,0.435050081742686,0.511359764496605,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00323407240032,0.255897791311334,1.28381696410176,0,0,0.899362287916574,6.58888871366531,6.36186972666707,0,0,0,0,0,0,0.272999822815972,8.34292048526905,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,0,0.392996164052485,0,0.354761064070598,0.422215270595328,0,0,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-67bp_to_ENST00000509697_5end | |||
|coexpression_cluster_id=C574 | |||
|description=CAGE_peak_11_at_SPON2_5end | |||
|id=chr4:1164925..1164936,- | |||
|ontology_enrichment_celltype=CL:0000136!1.53e-12!15;CL:0000048!1.82e-12!430;CL:0000057!4.67e-12!75;CL:0000723!6.65e-12!436;CL:0000034!3.51e-11!444;CL:0002334!1.14e-10!12;CL:0002320!2.57e-10!365;CL:0000134!4.72e-09!358;CL:0000055!7.25e-09!180;CL:0000219!1.17e-07!390;CL:0002371!3.01e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002622;2.58e-13;3!CL:0000135;2.72e-12;3!CL:0000388;2.72e-12;3!CL:0000134;2.92e-11;55!CL:0002569;5.85e-11;6!CL:0000048;2.59e-10;58!CL:0002617;4.78e-09;2!CL:0002583;9.31e-09;2!CL:0000723;1.98e-08;61!CL:0000034;2.77e-08;69!CL:0002334;5.03e-08;12!CL:0000136;6.44e-08;13!CL:0002504;8.01e-07;3!CL:1000279;8.01e-07;3!CL:1000280;8.01e-07;3!CL:0002615;9.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,3.00e-13,3;CL:0000136,1.20e-12,15;CL:0000135,3.26e-12,3;CL:0000388,3.26e-12,3;CL:0002569,6.69e-11,6;CL:0000048,1.09e-10,427;CL:0000723,2.09e-10,433;CL:0000034,4.84e-10,441;CL:0000134,2.01e-09,354;CL:0002617,2.99e-09,2;CL:0002320,4.50e-09,361;CL:0002583,8.27e-09,2;CL:0000219,1.41e-08,386;CL:0002334,4.45e-08,12;CL:0000057,3.40e-07,76;CL:0002504,7.81e-07,3;CL:1000279,7.81e-07,3;CL:1000280,7.81e-07,3;CL:0002615,9.77e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.15e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.15e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.56e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.02e-09!375;UBERON:0001013!4.75e-09!14;UBERON:0003688!6.97e-09!6;UBERON:0002358!6.97e-09!6;UBERON:0003684!6.97e-09!6;UBERON:0001178!6.97e-09!6;UBERON:0000914!5.36e-08!83;UBERON:0002329!5.36e-08!83;UBERON:0003077!5.36e-08!83;UBERON:0003059!5.36e-08!83;UBERON:0007282!5.36e-08!83;UBERON:0009618!5.36e-08!83;UBERON:0007285!5.36e-08!83;UBERON:0002072!6.28e-08!5;UBERON:0003102!1.42e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.72e-12;3!UBERON:0000043;2.72e-12;3!UBERON:0007845;2.72e-12;3!UBERON:0003422;5.85e-11;6!UBERON:0003104;2.10e-09;7!UBERON:0009142;2.10e-09;7!UBERON:0002072;7.62e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.26e-12,3;UBERON:0000043,3.26e-12,3;UBERON:0007845,3.26e-12,3;UBERON:0003422,6.69e-11,6;UBERON:0002384,1.35e-08,371;UBERON:0002072,7.20e-08,5 | |||
|phase1_expression=1.63510541343501,2.99740733447376,0.422863212287913,4.00293193412522,6.25745532198203,0.872338524100369,5.06599756336621,0.631719873426831,0.522371256399677,0,0,0,0,0.74259811776028,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,1.5608003841516,0,1.49448680551801,0.352303495931295,0,0.561803226808994,0,0.491337269247072,0.619954687054593,1.18800285728205,0.741800787835671,0,7.90479955997862,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0.600952235626387,0,0,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,3.85944562915731,0,0.464367928031979,7.21879481669586,0.118306800039844,0,0,0,0.435758888184812,0,0.134831308160164,0.196221465125346,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13217338068116,0.102827492703324,0.901029173531752,0,0,0,0,1.03417372606222,0,0.845302752556,0.797814349754612,4.16029747645464,0,0,0,0.428933980974443,2.71310802695722,2.46972101034231,0,1.06617584622764,1.58390374586686,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0.197030760201927,0.215627574859517,0.898401253958239,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0.426910231213777,0,0,0,0.496215615637554,0,2.80660094433074,0.640695746278505,0.511707249066704,0.804269605718038,0,1.07946785661859,1.77561725313127,0.0821271560138091,1.55776328755086,1.27831416305955,0,0,0,1.26295892981067,3.82391452814106,8.26083814244372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0.462145851343933,0.15350367472613,0.413509717453592,0.214840489736547,0.435050081742686,0.511359764496605,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00323407240032,0.255897791311334,1.28381696410176,0,0,0.899362287916574,6.58888871366531,6.36186972666707,0,0,0,0,0,0,0.272999822815972,8.34292048526905,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,0,0.392996164052485,0,0.354761064070598,0.422215270595328,0,0,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.467426619694449,1.66441758450784,0,0.251567901752575,0,0.228840068396924,1.96600200892211,0,0,0.159296767163702,1.34940933649081,1.24210365501008,0,1.06336685823198,3.1304703708704,1.20206087197775,0.761610424337591,0,0.363697318405119,0.859284456339908,2.32016879939247,3.98095888698616,0.400027764663154,1.71697852591396,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.96238241118321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,1.11598505450025,1.38652688589425,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0.435433495793923,0.684466602170562,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@SPON2 | |||
}} |
Revision as of 02:10, 13 September 2013
Short description: | p11@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SPON2_5end |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | -67bp_to_ENST00000509697_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 3.00e-13 | 3 |
fat cell | 1.20e-12 | 15 |
fibrocyte | 3.26e-12 | 3 |
tendon cell | 3.26e-12 | 3 |
mesenchymal stem cell of umbilical cord | 6.69e-11 | 6 |
multi fate stem cell | 1.09e-10 | 427 |
somatic stem cell | 2.09e-10 | 433 |
stem cell | 4.84e-10 | 441 |
mesenchymal cell | 2.01e-09 | 354 |
adipocyte of breast | 2.99e-09 | 2 |
connective tissue cell | 4.50e-09 | 361 |
subcutaneous preadipocyte | 8.27e-09 | 2 |
motile cell | 1.41e-08 | 386 |
preadipocyte | 4.45e-08 | 12 |
fibroblast | 3.40e-07 | 76 |
enteric smooth muscle cell | 7.81e-07 | 3 |
smooth muscle cell of large intestine | 7.81e-07 | 3 |
smooth muscle cell of colon | 7.81e-07 | 3 |
adipocyte of omentum tissue | 9.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.26e-12 | 3 |
tendon | 3.26e-12 | 3 |
regular connective tissue | 3.26e-12 | 3 |
mesenchyme of umbilical cord | 6.69e-11 | 6 |
connective tissue | 1.35e-08 | 371 |
hypodermis | 7.20e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.56e-13 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.