FFCP PHASE1:Hg19::chr3:190040733..190040742,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9076|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2032|TSSclassifier=N|UniProt=O95832|association_with_transcript=-469bp_to_ENST00000295522_5end|coexpression_cluster_id=C4314|description=CAGE_peak_9_at_CLDN1_5end|id=chr3:190040733..190040742,-|ontology_enrichment_celltype=CL:0002159!1.00e-08!13;CL:0000066!1.04e-08!254;CL:0001014!3.67e-08!2;CL:0001016!3.67e-08!2|ontology_enrichment_celltype_v019=CL:0000650;2.21e-15;2!CL:1000500;2.21e-15;2!CL:1000618;2.21e-15;2!CL:1001318;2.21e-15;2!CL:0002173;2.21e-15;2!CL:0000307;1.04e-10;3!CL:0000669;2.35e-08;4|ontology_enrichment_celltype_v019_2=CL:0000650,2.74e-15,2;CL:1000500,2.74e-15,2;CL:1000618,2.74e-15,2;CL:1001318,2.74e-15,2;CL:0002173,2.74e-15,2;CL:0000068,1.09e-10,3;CL:0000069,1.09e-10,3;CL:0000307,1.09e-10,3;CL:0000377,1.09e-10,3;CL:0000669,2.61e-08,4;CL:0000223,2.62e-08,58;CL:0002076,8.88e-07,42|ontology_enrichment_development_v019=UBERON:0008814;1.33e-15;2!UBERON:0010056;1.33e-15;2!CL:0000377;1.04e-10;3!CL:0000223;8.70e-07;58|ontology_enrichment_disease=DOID:1749!8.89e-11!14|ontology_enrichment_disease_v019=DOID:1749;3.72e-09;14|ontology_enrichment_disease_v019_2=DOID:1749,3.88e-09,14|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0006834;2.73e-29;1!UBERON:0003567;2.21e-15;2!UBERON:0003838;2.21e-15;2!UBERON:0003586;2.21e-15;2!UBERON:0005169;2.21e-15;2!UBERON:0002321;2.21e-15;2!UBERON:0005215;2.21e-15;2!UBERON:0002303;2.21e-15;2!UBERON:0002319;2.21e-15;2!UBERON:0001723;7.42e-11;3!UBERON:0001033;7.42e-11;3!UBERON:0003343;1.82e-08;4!UBERON:0004785;1.82e-08;4!UBERON:0003891;2.35e-08;4!UBERON:0000995;1.19e-07;17!UBERON:0003975;2.81e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.78e-29,1;UBERON:0003567,2.74e-15,2;UBERON:0003838,2.74e-15,2;UBERON:0003586,2.74e-15,2;UBERON:0005169,2.74e-15,2;UBERON:0002321,2.74e-15,2;UBERON:0005215,2.74e-15,2;UBERON:0002303,2.74e-15,2;UBERON:0002319,2.74e-15,2;UBERON:0001723,8.17e-11,3;UBERON:0001033,8.17e-11,3;UBERON:0010056,8.17e-11,3;UBERON:0003343,1.96e-08,4;UBERON:0004785,1.96e-08,4;UBERON:0003891,2.61e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0.329250856225877,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0.0941438007767792,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9845336444171,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.33946505990805,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,3.58129565066048,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0.179650404213174,0,1.4668973301944,0,0,0,0|short_description=p9@CLDN1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9076 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2032 | |||
|TSSclassifier=N | |||
|UniProt=O95832 | |||
|association_with_transcript=-469bp_to_ENST00000295522_5end | |||
|coexpression_cluster_id=C4314 | |||
|description=CAGE_peak_9_at_CLDN1_5end | |||
|id=chr3:190040733..190040742,- | |||
|ontology_enrichment_celltype=CL:0002159!1.00e-08!13;CL:0000066!1.04e-08!254;CL:0001014!3.67e-08!2;CL:0001016!3.67e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000650;2.21e-15;2!CL:1000500;2.21e-15;2!CL:1000618;2.21e-15;2!CL:1001318;2.21e-15;2!CL:0002173;2.21e-15;2!CL:0000307;1.04e-10;3!CL:0000669;2.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,2.74e-15,2;CL:1000500,2.74e-15,2;CL:1000618,2.74e-15,2;CL:1001318,2.74e-15,2;CL:0002173,2.74e-15,2;CL:0000068,1.09e-10,3;CL:0000069,1.09e-10,3;CL:0000307,1.09e-10,3;CL:0000377,1.09e-10,3;CL:0000669,2.61e-08,4;CL:0000223,2.62e-08,58;CL:0002076,8.88e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.33e-15;2!UBERON:0010056;1.33e-15;2!CL:0000377;1.04e-10;3!CL:0000223;8.70e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!8.89e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.72e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.88e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;2.73e-29;1!UBERON:0003567;2.21e-15;2!UBERON:0003838;2.21e-15;2!UBERON:0003586;2.21e-15;2!UBERON:0005169;2.21e-15;2!UBERON:0002321;2.21e-15;2!UBERON:0005215;2.21e-15;2!UBERON:0002303;2.21e-15;2!UBERON:0002319;2.21e-15;2!UBERON:0001723;7.42e-11;3!UBERON:0001033;7.42e-11;3!UBERON:0003343;1.82e-08;4!UBERON:0004785;1.82e-08;4!UBERON:0003891;2.35e-08;4!UBERON:0000995;1.19e-07;17!UBERON:0003975;2.81e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.78e-29,1;UBERON:0003567,2.74e-15,2;UBERON:0003838,2.74e-15,2;UBERON:0003586,2.74e-15,2;UBERON:0005169,2.74e-15,2;UBERON:0002321,2.74e-15,2;UBERON:0005215,2.74e-15,2;UBERON:0002303,2.74e-15,2;UBERON:0002319,2.74e-15,2;UBERON:0001723,8.17e-11,3;UBERON:0001033,8.17e-11,3;UBERON:0010056,8.17e-11,3;UBERON:0003343,1.96e-08,4;UBERON:0004785,1.96e-08,4;UBERON:0003891,2.61e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0.329250856225877,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0.0941438007767792,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9845336444171,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.33946505990805,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,3.58129565066048,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0.179650404213174,0,1.4668973301944,0,0,0,0 | |||
|short_description=p9@CLDN1 | |||
}} |
Revision as of 23:20, 12 September 2013
Short description: | p9@CLDN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_CLDN1_5end |
Coexpression cluster: | C4314_oral_endometrial_malignant_uterus_squamous_immature_Keratinocyte |
Association with transcript: | -469bp_to_ENST00000295522_5end |
EntrezGene: | CLDN1 |
HGNC: | 2032 |
UniProt: | O95832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 2.74e-15 | 2 |
kidney interstitial cell | 2.74e-15 | 2 |
juxtaglomerular complex cell | 2.74e-15 | 2 |
renal interstitial pericyte | 2.74e-15 | 2 |
extraglomerular mesangial cell | 2.74e-15 | 2 |
duct epithelial cell | 1.09e-10 | 3 |
branched duct epithelial cell | 1.09e-10 | 3 |
tracheal epithelial cell | 1.09e-10 | 3 |
tracheoblast | 1.09e-10 | 3 |
pericyte cell | 2.61e-08 | 4 |
endodermal cell | 2.62e-08 | 58 |
endo-epithelial cell | 8.88e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.78e-29 | 1 |
abdomen connective tissue | 2.74e-15 | 2 |
abdominal segment connective tissue | 2.74e-15 | 2 |
trunk connective tissue | 2.74e-15 | 2 |
interstitial tissue | 2.74e-15 | 2 |
extraglomerular mesangium | 2.74e-15 | 2 |
kidney interstitium | 2.74e-15 | 2 |
juxtaglomerular apparatus | 2.74e-15 | 2 |
mesangium | 2.74e-15 | 2 |
tongue | 8.17e-11 | 3 |
gustatory system | 8.17e-11 | 3 |
future tongue | 8.17e-11 | 3 |
mucosa of oral region | 1.96e-08 | 4 |
respiratory system mucosa | 1.96e-08 | 4 |
stroma | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.88e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.