FFCP PHASE1:Hg19::chr3:188665020..188665032,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=285386|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24759|TSSclassifier=S|UniProt=Q6ZUI0|association_with_transcript=17bp_to_ENST00000433971,uc003frv.1_5end|coexpression_cluster_id=C166|description=CAGE_peak_10_at_TPRG1_5end|id=chr3:188665020..188665032,+|ontology_enrichment_celltype=CL:0002194!3.53e-37!63;CL:0000576!3.53e-37!63;CL:0000040!3.53e-37!63;CL:0000559!3.53e-37!63;CL:0002009!1.19e-35!65;CL:0000839!3.26e-32!70;CL:0000766!3.94e-32!76;CL:0000557!1.39e-31!71;CL:0002057!1.41e-25!42;CL:0000860!2.72e-23!45;CL:0000763!9.93e-18!112;CL:0000049!9.93e-18!112;CL:0002087!6.19e-15!119;CL:0002031!5.08e-13!124;CL:0000738!1.37e-12!140;CL:0002032!2.19e-08!165;CL:0000837!2.19e-08!165;CL:0000037!3.55e-08!172;CL:0000566!3.55e-08!172;CL:0000235!3.54e-07!10;CL:0000988!3.68e-07!182|ontology_enrichment_celltype_v019=CL:0000235;1.08e-43;6!CL:0000473;2.21e-29;39!CL:0000234;2.21e-29;39!CL:0000860;8.47e-15;33!CL:0002057;8.47e-15;33!CL:0000840;2.07e-11;5!CL:0000766;1.19e-09;69!CL:0000576;7.87e-09;48!CL:0002581;2.29e-08;1!CL:0000990;9.14e-08;8|ontology_enrichment_celltype_v019_2=CL:0000235,2.61e-43,6;CL:0002194,3.31e-35,59;CL:0000576,3.31e-35,59;CL:0000040,3.31e-35,59;CL:0000559,3.31e-35,59;CL:0002009,5.82e-34,61;CL:0000839,3.57e-31,66;CL:0000557,1.15e-30,67;CL:0000473,1.37e-30,48;CL:0000234,1.37e-30,48;CL:0000766,2.48e-28,72;CL:0000763,7.68e-18,108;CL:0000049,7.68e-18,108;CL:0002087,1.48e-16,115;CL:0002031,9.94e-16,120;CL:0000738,1.73e-13,136;CL:0000860,3.07e-12,42;CL:0002057,3.07e-12,42;CL:0000840,1.62e-11,5;CL:0001029,1.62e-11,5;CL:0002032,7.14e-11,161;CL:0000837,7.14e-11,161;CL:0000037,2.80e-10,168;CL:0000988,1.39e-09,177;CL:0002581,1.59e-08,1;CL:0000990,7.77e-08,8|ontology_enrichment_development_v019=CL:0002057;3.34e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.22e-26!80;UBERON:0001474!6.29e-24!86;UBERON:0002390!7.40e-23!102;UBERON:0003061!7.40e-23!102;UBERON:0002405!9.84e-22!115;UBERON:0004765!9.57e-20!101;UBERON:0001434!9.57e-20!101;UBERON:0002193!1.18e-19!112;UBERON:0007023!1.14e-15!115;UBERON:0002204!2.34e-11!167;UBERON:0003081!4.81e-08!216;UBERON:0000926!5.34e-07!448;UBERON:0004120!5.34e-07!448;UBERON:0006603!5.34e-07!448;UBERON:0000062!8.48e-07!511|ontology_enrichment_uberon_v019=UBERON:0000996;2.29e-08;1!UBERON:0002134;2.29e-08;1!UBERON:0005208;2.29e-08;1!UBERON:0004145;2.29e-08;1!UBERON:0005946;2.29e-08;1!UBERON:0005965;2.29e-08;1!UBERON:0002078;2.29e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-26,76;UBERON:0001474,1.66e-24,82;UBERON:0004765,4.74e-22,90;UBERON:0002405,3.08e-21,93;UBERON:0002390,5.44e-20,98;UBERON:0003061,5.44e-20,98;UBERON:0001434,1.58e-19,100;UBERON:0002193,7.68e-18,108;UBERON:0002204,2.32e-10,167;UBERON:0003081,4.81e-09,203;UBERON:0002134,1.84e-08,1;UBERON:0005208,1.84e-08,1;UBERON:0005946,1.84e-08,1;UBERON:0005965,1.84e-08,1;UBERON:0002078,1.84e-08,1;UBERON:0000996,2.13e-08,1|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0.755751887377619,0,0.464858073811369,3.70051099219643,1.23882548358041,0.28769239232215,0.768482119587302,1.18241114944293,0,1.29096936716765,0,0.564727018627814,1.36453075028923,0.898893937780338,0,0.962787081228281,0,0,0.797854630486527,0.852449501065388,0,0,0,1.25624332628372,1.5644487552606,3.47502151528187,0,1.10483290796269,0.316462387440884,0,0.425208599930087,0.419317291016752,0.112328631146495,0.150176892841506,0.32145117339416,0.570025487482497,0.59675003159727,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,2.92092654289215,1.91542711029194,2.52620124985844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,3.9313088667105,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87894419479671,17.0823113551644,11.7418618208095,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,8.43335757932127,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.671028323677248,0.166849141711909,0,0,0,0,0,0,0,3.22317994398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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=285386 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24759 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZUI0 | |||
|association_with_transcript=17bp_to_ENST00000433971,uc003frv.1_5end | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_10_at_TPRG1_5end | |||
|id=chr3:188665020..188665032,+ | |||
|ontology_enrichment_celltype=CL:0002194!3.53e-37!63;CL:0000576!3.53e-37!63;CL:0000040!3.53e-37!63;CL:0000559!3.53e-37!63;CL:0002009!1.19e-35!65;CL:0000839!3.26e-32!70;CL:0000766!3.94e-32!76;CL:0000557!1.39e-31!71;CL:0002057!1.41e-25!42;CL:0000860!2.72e-23!45;CL:0000763!9.93e-18!112;CL:0000049!9.93e-18!112;CL:0002087!6.19e-15!119;CL:0002031!5.08e-13!124;CL:0000738!1.37e-12!140;CL:0002032!2.19e-08!165;CL:0000837!2.19e-08!165;CL:0000037!3.55e-08!172;CL:0000566!3.55e-08!172;CL:0000235!3.54e-07!10;CL:0000988!3.68e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.08e-43;6!CL:0000473;2.21e-29;39!CL:0000234;2.21e-29;39!CL:0000860;8.47e-15;33!CL:0002057;8.47e-15;33!CL:0000840;2.07e-11;5!CL:0000766;1.19e-09;69!CL:0000576;7.87e-09;48!CL:0002581;2.29e-08;1!CL:0000990;9.14e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.61e-43,6;CL:0002194,3.31e-35,59;CL:0000576,3.31e-35,59;CL:0000040,3.31e-35,59;CL:0000559,3.31e-35,59;CL:0002009,5.82e-34,61;CL:0000839,3.57e-31,66;CL:0000557,1.15e-30,67;CL:0000473,1.37e-30,48;CL:0000234,1.37e-30,48;CL:0000766,2.48e-28,72;CL:0000763,7.68e-18,108;CL:0000049,7.68e-18,108;CL:0002087,1.48e-16,115;CL:0002031,9.94e-16,120;CL:0000738,1.73e-13,136;CL:0000860,3.07e-12,42;CL:0002057,3.07e-12,42;CL:0000840,1.62e-11,5;CL:0001029,1.62e-11,5;CL:0002032,7.14e-11,161;CL:0000837,7.14e-11,161;CL:0000037,2.80e-10,168;CL:0000988,1.39e-09,177;CL:0002581,1.59e-08,1;CL:0000990,7.77e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.34e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.22e-26!80;UBERON:0001474!6.29e-24!86;UBERON:0002390!7.40e-23!102;UBERON:0003061!7.40e-23!102;UBERON:0002405!9.84e-22!115;UBERON:0004765!9.57e-20!101;UBERON:0001434!9.57e-20!101;UBERON:0002193!1.18e-19!112;UBERON:0007023!1.14e-15!115;UBERON:0002204!2.34e-11!167;UBERON:0003081!4.81e-08!216;UBERON:0000926!5.34e-07!448;UBERON:0004120!5.34e-07!448;UBERON:0006603!5.34e-07!448;UBERON:0000062!8.48e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;2.29e-08;1!UBERON:0002134;2.29e-08;1!UBERON:0005208;2.29e-08;1!UBERON:0004145;2.29e-08;1!UBERON:0005946;2.29e-08;1!UBERON:0005965;2.29e-08;1!UBERON:0002078;2.29e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-26,76;UBERON:0001474,1.66e-24,82;UBERON:0004765,4.74e-22,90;UBERON:0002405,3.08e-21,93;UBERON:0002390,5.44e-20,98;UBERON:0003061,5.44e-20,98;UBERON:0001434,1.58e-19,100;UBERON:0002193,7.68e-18,108;UBERON:0002204,2.32e-10,167;UBERON:0003081,4.81e-09,203;UBERON:0002134,1.84e-08,1;UBERON:0005208,1.84e-08,1;UBERON:0005946,1.84e-08,1;UBERON:0005965,1.84e-08,1;UBERON:0002078,1.84e-08,1;UBERON:0000996,2.13e-08,1 | |||
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|short_description=p10@TPRG1 | |||
}} |
Revision as of 23:17, 12 September 2013
Short description: | p10@TPRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_TPRG1_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | 17bp_to_ENST00000433971, uc003frv.1_5end |
EntrezGene: | TPRG1 |
HGNC: | 24759 |
UniProt: | Q6ZUI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.61e-43 | 6 |
monopoietic cell | 3.31e-35 | 59 |
monocyte | 3.31e-35 | 59 |
monoblast | 3.31e-35 | 59 |
promonocyte | 3.31e-35 | 59 |
macrophage dendritic cell progenitor | 5.82e-34 | 61 |
myeloid lineage restricted progenitor cell | 3.57e-31 | 66 |
granulocyte monocyte progenitor cell | 1.15e-30 | 67 |
defensive cell | 1.37e-30 | 48 |
phagocyte | 1.37e-30 | 48 |
myeloid leukocyte | 2.48e-28 | 72 |
myeloid cell | 7.68e-18 | 108 |
common myeloid progenitor | 7.68e-18 | 108 |
nongranular leukocyte | 1.48e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 9.94e-16 | 120 |
leukocyte | 1.73e-13 | 136 |
classical monocyte | 3.07e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.07e-12 | 42 |
immature conventional dendritic cell | 1.62e-11 | 5 |
common dendritic progenitor | 1.62e-11 | 5 |
hematopoietic oligopotent progenitor cell | 7.14e-11 | 161 |
hematopoietic multipotent progenitor cell | 7.14e-11 | 161 |
hematopoietic stem cell | 2.80e-10 | 168 |
hematopoietic cell | 1.39e-09 | 177 |
perirenal preadipocyte | 1.59e-08 | 1 |
conventional dendritic cell | 7.77e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-26 | 76 |
bone element | 1.66e-24 | 82 |
skeletal element | 4.74e-22 | 90 |
immune system | 3.08e-21 | 93 |
hematopoietic system | 5.44e-20 | 98 |
blood island | 5.44e-20 | 98 |
skeletal system | 1.58e-19 | 100 |
hemolymphoid system | 7.68e-18 | 108 |
musculoskeletal system | 2.32e-10 | 167 |
lateral plate mesoderm | 4.81e-09 | 203 |
tricuspid valve | 1.84e-08 | 1 |
right atrium valve | 1.84e-08 | 1 |
outflow tract of atrium | 1.84e-08 | 1 |
outflow part of right atrium | 1.84e-08 | 1 |
right cardiac atrium | 1.84e-08 | 1 |
vagina | 2.13e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.