FFCP PHASE1:Hg19::chr3:156878540..156878560,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57018|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20569|TSSclassifier=S|UniProt=C9JPL0|association_with_transcript=0bp_to_ENST00000461804_5end|coexpression_cluster_id=C2|description=CAGE_peak_5_at_CCNL1_5end|id=chr3:156878540..156878560,-|ontology_enrichment_celltype=CL:0002057!4.50e-26!42;CL:0000860!1.84e-24!45;CL:0000766!3.52e-19!76;CL:0002009!1.74e-15!65;CL:0000738!1.85e-15!140;CL:0000557!3.82e-15!71;CL:0002194!1.37e-14!63;CL:0000576!1.37e-14!63;CL:0000040!1.37e-14!63;CL:0000559!1.37e-14!63;CL:0000839!1.06e-13!70;CL:0000048!2.26e-12!430;CL:0000723!4.17e-12!436;CL:0000034!6.96e-12!444;CL:0002087!6.00e-11!119;CL:0002320!6.65e-11!365;CL:0002031!1.06e-10!124;CL:0000012!1.91e-10!682;CL:0000134!2.01e-10!358;CL:0000548!1.69e-09!679;CL:0000004!1.69e-09!679;CL:0000255!1.69e-09!679;CL:0000003!3.55e-08!722;CL:0000763!5.27e-08!112;CL:0000049!5.27e-08!112;CL:0000037!6.53e-08!172;CL:0000566!6.53e-08!172;CL:0000144!1.77e-07!625;CL:0000219!1.81e-07!390;CL:0002371!1.81e-07!591;CL:0000988!6.32e-07!182;CL:0002032!9.26e-07!165;CL:0000837!9.26e-07!165|ontology_enrichment_celltype_v019=CL:0000860;3.83e-33;33!CL:0002057;3.83e-33;33!CL:0000473;3.70e-23;39!CL:0000234;3.70e-23;39!CL:0000576;4.05e-22;48!CL:0000766;1.00e-17;69!CL:0000094;4.21e-10;8!CL:0002087;1.09e-08;104!CL:0000081;3.21e-08;11!CL:0002393;6.73e-08;6!CL:0002397;6.73e-08;6!CL:0000763;2.59e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,1.48e-42,42;CL:0002057,1.48e-42,42;CL:0000473,4.19e-37,48;CL:0000234,4.19e-37,48;CL:0000766,1.04e-35,72;CL:0000557,9.63e-29,67;CL:0000738,1.05e-28,136;CL:0002009,4.55e-28,61;CL:0000839,1.74e-26,66;CL:0002194,1.89e-26,59;CL:0000576,1.89e-26,59;CL:0000040,1.89e-26,59;CL:0000559,1.89e-26,59;CL:0002031,2.16e-21,120;CL:0002087,5.90e-21,115;CL:0000134,1.89e-20,354;CL:0002320,7.60e-20,361;CL:0000763,1.51e-19,108;CL:0000049,1.51e-19,108;CL:0000037,1.55e-19,168;CL:0000048,8.03e-19,427;CL:0000034,9.72e-19,441;CL:0000723,1.67e-18,433;CL:0000988,4.80e-18,177;CL:0002032,2.75e-17,161;CL:0000837,2.75e-17,161;CL:0000219,5.31e-16,386;CL:0000094,4.10e-10,8;CL:0000081,2.80e-08,11;CL:0002393,8.24e-08,9;CL:0002397,8.24e-08,9|ontology_enrichment_development_v019=CL:0002057;4.86e-31;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.85e-14!80;UBERON:0002390!2.40e-13!102;UBERON:0003061!2.40e-13!102;UBERON:0002405!1.24e-12!115;UBERON:0001474!1.25e-12!86;UBERON:0002193!4.12e-12!112;UBERON:0002384!1.45e-10!375;UBERON:0002204!2.14e-09!167;UBERON:0004765!4.10e-09!101;UBERON:0001434!4.10e-09!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.55e-26,76;UBERON:0001474,5.70e-24,82;UBERON:0002390,4.84e-22,98;UBERON:0003061,4.84e-22,98;UBERON:0004765,3.61e-21,90;UBERON:0002405,4.04e-21,93;UBERON:0002193,4.27e-21,108;UBERON:0002384,5.60e-19,371;UBERON:0001434,1.90e-18,100;UBERON:0003081,4.61e-14,203;UBERON:0002204,4.87e-12,167;UBERON:0000926,5.04e-08,315;UBERON:0004120,5.04e-08,315;UBERON:0006603,5.04e-08,315|phase1_expression=1.45342703416445,1.2846031433459,4.08767771878316,0,0.893922188854576,3.48935409640147,0,0,0.783556884599516,0,1.39560233594486,0,0,0.495065411840187,0.662794751455832,2.01697543935533,0.602694528023977,0,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0,0,0,0.0821005894499457,0,14.1611139665605,4.22212337906934,9.90823189222886,0,0.6024118375565,0.369754010166788,0,0,4.40400659002271,13.8498852132969,14.6397446653203,9.76548918221333,0,0,0,2.03557534291391,1.88937971844405,4.60909716256851,3.25400651667958,4.52284676824008,10.8397229813286,21.001544639517,11.7833925003386,34.762887793622,18.2715210790408,17.4280864567633,24.3767675869815,3.57660445130949,2.18324920046277,5.16864014223695,17.4467818651414,9.62787081228281,16.6227652707751,4.61791820261403,4.18873681005427,8.09827026012119,9.86711411337186,6.24123747160254,10.5879782329248,14.3211739196344,5.21482918420201,23.6735840728577,5.44859552370032,9.94349617166425,14.5572698222807,2.74631872205524,2.76385589954557,5.03180749220102,1.12328631146495,1.35159203557356,1.44653028027372,1.42506371870624,0.79566670879636,1.46131323011707,0,0,0,2.13365111283254,0,0,0,0,6.26134266020393,1.17447437874188,3.44045905312706,2.64342657158052,5.04457706683382,0.790152254325231,0.786839080455332,3.53709686474248,3.70082698199117,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.650296737799391,0.164437904603676,0,0,0.14828656316206,0,0,0,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0,1.80690142893327,0.255973222308837,1.24930726552346,0,0.821127996921047,2.62088766192152,2.40696176205157,1.59306844271079,2.43806866313962,4.02420515822182,0.12786256184353,0,0,0.289693037921647,0,3.40644409211845,0.0945348171640679,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0.324547393654683,0,0,0.715471872916026,0.571994910780128,1.48583000531826,0,0,0,0,0,0.275118041940067,0.2089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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57018 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20569 | |||
|TSSclassifier=S | |||
|UniProt=C9JPL0 | |||
|association_with_transcript=0bp_to_ENST00000461804_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_CCNL1_5end | |||
|id=chr3:156878540..156878560,- | |||
|ontology_enrichment_celltype=CL:0002057!4.50e-26!42;CL:0000860!1.84e-24!45;CL:0000766!3.52e-19!76;CL:0002009!1.74e-15!65;CL:0000738!1.85e-15!140;CL:0000557!3.82e-15!71;CL:0002194!1.37e-14!63;CL:0000576!1.37e-14!63;CL:0000040!1.37e-14!63;CL:0000559!1.37e-14!63;CL:0000839!1.06e-13!70;CL:0000048!2.26e-12!430;CL:0000723!4.17e-12!436;CL:0000034!6.96e-12!444;CL:0002087!6.00e-11!119;CL:0002320!6.65e-11!365;CL:0002031!1.06e-10!124;CL:0000012!1.91e-10!682;CL:0000134!2.01e-10!358;CL:0000548!1.69e-09!679;CL:0000004!1.69e-09!679;CL:0000255!1.69e-09!679;CL:0000003!3.55e-08!722;CL:0000763!5.27e-08!112;CL:0000049!5.27e-08!112;CL:0000037!6.53e-08!172;CL:0000566!6.53e-08!172;CL:0000144!1.77e-07!625;CL:0000219!1.81e-07!390;CL:0002371!1.81e-07!591;CL:0000988!6.32e-07!182;CL:0002032!9.26e-07!165;CL:0000837!9.26e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.83e-33;33!CL:0002057;3.83e-33;33!CL:0000473;3.70e-23;39!CL:0000234;3.70e-23;39!CL:0000576;4.05e-22;48!CL:0000766;1.00e-17;69!CL:0000094;4.21e-10;8!CL:0002087;1.09e-08;104!CL:0000081;3.21e-08;11!CL:0002393;6.73e-08;6!CL:0002397;6.73e-08;6!CL:0000763;2.59e-07;100 | |||
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|ontology_enrichment_development_v019=CL:0002057;4.86e-31;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.85e-14!80;UBERON:0002390!2.40e-13!102;UBERON:0003061!2.40e-13!102;UBERON:0002405!1.24e-12!115;UBERON:0001474!1.25e-12!86;UBERON:0002193!4.12e-12!112;UBERON:0002384!1.45e-10!375;UBERON:0002204!2.14e-09!167;UBERON:0004765!4.10e-09!101;UBERON:0001434!4.10e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.55e-26,76;UBERON:0001474,5.70e-24,82;UBERON:0002390,4.84e-22,98;UBERON:0003061,4.84e-22,98;UBERON:0004765,3.61e-21,90;UBERON:0002405,4.04e-21,93;UBERON:0002193,4.27e-21,108;UBERON:0002384,5.60e-19,371;UBERON:0001434,1.90e-18,100;UBERON:0003081,4.61e-14,203;UBERON:0002204,4.87e-12,167;UBERON:0000926,5.04e-08,315;UBERON:0004120,5.04e-08,315;UBERON:0006603,5.04e-08,315 | |||
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| |||
|short_description=p5@CCNL1 | |||
}} |
Revision as of 22:22, 12 September 2013
Short description: | p5@CCNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CCNL1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000461804_5end |
EntrezGene: | CCNL1 |
HGNC: | 20569 |
UniProt: | C9JPL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.55e-26 | 76 |
bone element | 5.70e-24 | 82 |
hematopoietic system | 4.84e-22 | 98 |
blood island | 4.84e-22 | 98 |
skeletal element | 3.61e-21 | 90 |
immune system | 4.04e-21 | 93 |
hemolymphoid system | 4.27e-21 | 108 |
connective tissue | 5.60e-19 | 371 |
skeletal system | 1.90e-18 | 100 |
lateral plate mesoderm | 4.61e-14 | 203 |
musculoskeletal system | 4.87e-12 | 167 |
mesoderm | 5.04e-08 | 315 |
mesoderm-derived structure | 5.04e-08 | 315 |
presumptive mesoderm | 5.04e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.