FFCP PHASE1:Hg19::chr3:149374982..149375000,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25937|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24042|TSSclassifier=S|UniProt=Q9GZV5|association_with_transcript=86bp_to_AL833852_5end|description=CAGE_peak_15_at_WWTR1_5end|id=chr3:149374982..149375000,-|ontology_enrichment_celltype=CL:0000055!6.23e-13!180;CL:0000359!1.80e-10!32;CL:0000187!3.07e-10!54;CL:0000680!4.40e-10!57;CL:0000056!4.40e-10!57;CL:0000355!4.40e-10!57;CL:0000222!2.62e-09!119;CL:0000192!4.40e-09!42;CL:0000514!4.40e-09!42;CL:0000183!6.40e-09!59;CL:0000393!2.16e-08!60;CL:0000211!2.16e-08!60;CL:0002139!3.23e-07!24;CL:0000071!8.66e-07!18;CL:0002546!8.66e-07!18|ontology_enrichment_celltype_v019=CL:0000359;2.82e-15;32!CL:0000192;1.50e-09;43!CL:0002589;4.00e-08;2!CL:0000187;8.76e-08;55!CL:0000393;5.48e-07;61!CL:0000211;5.48e-07;61|ontology_enrichment_celltype_v019_2=CL:0000359,1.65e-16,32;CL:0000187,3.73e-13,55;CL:0000680,2.79e-12,58;CL:0000056,2.79e-12,58;CL:0000355,2.79e-12,58;CL:0000192,1.56e-11,43;CL:0000514,1.56e-11,43;CL:0000393,1.71e-11,61;CL:0000211,1.71e-11,61;CL:0002589,1.29e-08,2;CL:0000222,3.20e-08,121|ontology_enrichment_development_v019=CL:0000514;1.50e-09;43!CL:0000355;1.76e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;2.38e-11;3!DOID:127;2.38e-11;3!DOID:0060072;1.27e-08;4|ontology_enrichment_disease_v019_2=DOID:0060084,9.40e-12,3;DOID:127,9.40e-12,3;DOID:0060072,6.39e-09,4|ontology_enrichment_uberon=UBERON:0001981!3.57e-20!60;UBERON:0007500!3.57e-20!60;UBERON:0004537!3.57e-20!60;UBERON:0006965!3.57e-20!60;UBERON:0004872!2.71e-19!84;UBERON:0000055!9.33e-19!69;UBERON:0001637!1.63e-17!42;UBERON:0003509!1.63e-17!42;UBERON:0004572!1.63e-17!42;UBERON:0002049!1.67e-16!79;UBERON:0007798!1.67e-16!79;UBERON:0004111!9.76e-16!241;UBERON:0000025!3.53e-14!194;UBERON:0001009!4.17e-13!113;UBERON:0000477!1.01e-12!286;UBERON:0004535!1.18e-12!110;UBERON:0004573!5.07e-12!33;UBERON:0004571!5.07e-12!33;UBERON:0003914!6.85e-12!118;UBERON:0000483!9.53e-12!309;UBERON:0000119!1.43e-11!312;UBERON:0002385!4.55e-10!63;UBERON:0001015!4.55e-10!63;UBERON:0000383!4.55e-10!63;UBERON:0001134!8.62e-10!61;UBERON:0002036!8.62e-10!61;UBERON:0003082!8.62e-10!61;UBERON:0004290!2.01e-09!70;UBERON:0000475!9.24e-09!365;UBERON:0000490!1.02e-08!138;UBERON:0000467!1.13e-07!625;UBERON:0000947!1.22e-07!21;UBERON:0010191!1.22e-07!21;UBERON:0000480!1.49e-07!626;UBERON:0000481!1.80e-07!347;UBERON:0000914!2.57e-07!83;UBERON:0002329!2.57e-07!83;UBERON:0003077!2.57e-07!83;UBERON:0003059!2.57e-07!83;UBERON:0007282!2.57e-07!83;UBERON:0009618!2.57e-07!83;UBERON:0007285!2.57e-07!83;UBERON:0000923!8.61e-07!604;UBERON:0005291!8.61e-07!604;UBERON:0006598!8.61e-07!604;UBERON:0002532!8.61e-07!604;UBERON:0001986!8.66e-07!18;UBERON:0004638!8.66e-07!18;UBERON:0004852!8.66e-07!18;UBERON:0007100!9.59e-07!27|ontology_enrichment_uberon_v019=UBERON:0001637;1.78e-11;42!UBERON:0003509;1.78e-11;42!UBERON:0004572;1.78e-11;42!UBERON:0004573;4.56e-11;33!UBERON:0004571;4.56e-11;33!UBERON:0001264;3.87e-09;10!UBERON:0007500;1.42e-08;56!UBERON:0001981;1.42e-08;56!UBERON:0004537;1.42e-08;56!UBERON:0001529;4.00e-08;2!UBERON:0007204;4.00e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.88e-16,42;UBERON:0003509,2.88e-16,42;UBERON:0004572,2.88e-16,42;UBERON:0004573,2.12e-13,33;UBERON:0004571,2.12e-13,33;UBERON:0007500,2.99e-12,59;UBERON:0001981,2.99e-12,59;UBERON:0004537,2.99e-12,59;UBERON:0006965,2.99e-12,59;UBERON:0004872,2.13e-11,83;UBERON:0001134,3.00e-11,62;UBERON:0002036,3.00e-11,62;UBERON:0003082,3.00e-11,62;UBERON:0002385,8.78e-11,64;UBERON:0001015,8.78e-11,64;UBERON:0000383,8.78e-11,64;UBERON:0007503,1.03e-10,78;UBERON:0002329,1.08e-10,71;UBERON:0003059,1.08e-10,71;UBERON:0007282,1.08e-10,71;UBERON:0004290,1.08e-10,71;UBERON:0009618,1.08e-10,71;UBERON:0003077,1.72e-10,72;UBERON:0007285,1.72e-10,72;UBERON:0007524,2.71e-10,73;UBERON:0000055,3.88e-10,68;UBERON:0001264,3.06e-09,10;UBERON:0001529,1.29e-08,2;UBERON:0007204,1.29e-08,2;UBERON:0000486,1.36e-08,83;UBERON:0002049,2.25e-08,78;UBERON:0007798,2.25e-08,78;UBERON:0003914,9.44e-08,117;UBERON:0004535,1.23e-07,109;UBERON:0001009,2.55e-07,112;UBERON:0003498,4.21e-07,5;UBERON:0005985,4.21e-07,5|phase1_expression=0,0.856402095563933,0.704772020479856,0,0.893922188854576,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0.662794751455832,1.34465029290355,0,0.730310090387373,2.43966399395253,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0,1.00267582127178,0.434539556882471,6.36228757640879,1.94653948121054,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0,3.39184765154406,0.838998872419812,0.550236083880135,0.835979866147242,0.775250277507987,0,0.33472061276467,2.01414658554573,0.760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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |||
|TSSclassifier=S | |||
|UniProt=Q9GZV5 | |||
|association_with_transcript=86bp_to_AL833852_5end | |||
|description=CAGE_peak_15_at_WWTR1_5end | |||
|id=chr3:149374982..149375000,- | |||
|ontology_enrichment_celltype=CL:0000055!6.23e-13!180;CL:0000359!1.80e-10!32;CL:0000187!3.07e-10!54;CL:0000680!4.40e-10!57;CL:0000056!4.40e-10!57;CL:0000355!4.40e-10!57;CL:0000222!2.62e-09!119;CL:0000192!4.40e-09!42;CL:0000514!4.40e-09!42;CL:0000183!6.40e-09!59;CL:0000393!2.16e-08!60;CL:0000211!2.16e-08!60;CL:0002139!3.23e-07!24;CL:0000071!8.66e-07!18;CL:0002546!8.66e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.82e-15;32!CL:0000192;1.50e-09;43!CL:0002589;4.00e-08;2!CL:0000187;8.76e-08;55!CL:0000393;5.48e-07;61!CL:0000211;5.48e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.65e-16,32;CL:0000187,3.73e-13,55;CL:0000680,2.79e-12,58;CL:0000056,2.79e-12,58;CL:0000355,2.79e-12,58;CL:0000192,1.56e-11,43;CL:0000514,1.56e-11,43;CL:0000393,1.71e-11,61;CL:0000211,1.71e-11,61;CL:0002589,1.29e-08,2;CL:0000222,3.20e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.50e-09;43!CL:0000355;1.76e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.38e-11;3!DOID:127;2.38e-11;3!DOID:0060072;1.27e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.40e-12,3;DOID:127,9.40e-12,3;DOID:0060072,6.39e-09,4 | |||
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| |||
|short_description=p15@WWTR1 | |||
}} |
Revision as of 22:04, 12 September 2013
Short description: | p15@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_WWTR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_AL833852_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | Q9GZV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.65e-16 | 32 |
muscle cell | 3.73e-13 | 55 |
muscle precursor cell | 2.79e-12 | 58 |
myoblast | 2.79e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.79e-12 | 58 |
smooth muscle cell | 1.56e-11 | 43 |
smooth muscle myoblast | 1.56e-11 | 43 |
electrically responsive cell | 1.71e-11 | 61 |
electrically active cell | 1.71e-11 | 61 |
smooth muscle cell of the brachiocephalic vasculature | 1.29e-08 | 2 |
mesodermal cell | 3.20e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.40e-12 | 3 |
leiomyoma | 9.40e-12 | 3 |
benign neoplasm | 6.39e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.