FFCP PHASE1:Hg19::chr3:134046037..134046050,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C91|description=CAGE_peak_at_chr3:134046037..134046050,+|id=chr3:134046037..134046050,+|ontology_enrichment_celltype=CL:0000220!1.64e-10!246;CL:0002321!2.95e-10!248;CL:0000548!4.99e-10!679;CL:0000004!4.99e-10!679;CL:0000255!4.99e-10!679;CL:0000012!8.79e-10!682;CL:0000077!1.18e-09!19;CL:0000144!1.02e-08!625;CL:0000066!1.74e-07!254;CL:0000055!2.23e-07!180;CL:0002076!4.59e-07!43;CL:0000003!9.81e-07!722|ontology_enrichment_celltype_v019=CL:0000346;7.11e-34;3!CL:1000428;7.11e-34;3!CL:0002559;1.29e-20;5!CL:0000319;2.32e-12;1!CL:0000159;8.28e-07;2!CL:0002589;8.28e-07;2|ontology_enrichment_celltype_v019_2=CL:0000346,8.46e-34,3;CL:1000428,8.46e-34,3;CL:0002559,1.43e-20,5;CL:0000319,1.11e-12,1;CL:0000159,5.73e-07,2;CL:0002589,8.52e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3030;2.32e-12;1|ontology_enrichment_disease_v019_2=DOID:3030,1.11e-12,1|ontology_enrichment_uberon=UBERON:0004923!1.05e-08!57;UBERON:0000486!4.58e-08!82;UBERON:0004290!7.51e-07!70|ontology_enrichment_uberon_v019=UBERON:0000412;7.11e-34;3!UBERON:0001992;7.11e-34;3!UBERON:0002073;1.29e-20;5!UBERON:0001003;4.31e-12;15!UBERON:0007376;4.31e-12;15!UBERON:0002067;9.95e-12;9!UBERON:0001529;8.28e-07;2!UBERON:0007204;8.28e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000412,8.46e-34,3;UBERON:0001992,8.46e-34,3;UBERON:0002073,1.43e-20,5;UBERON:0005086,1.43e-20,5;UBERON:0001003,5.14e-12,15;UBERON:0007376,5.14e-12,15;UBERON:0007383,5.14e-12,15;UBERON:0002067,1.05e-11,9;UBERON:0004016,1.05e-11,9;UBERON:0010083,1.05e-11,9;UBERON:0001529,8.52e-07,2;UBERON:0007204,8.52e-07,2|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0,0.491467873003018,3.48900583986214,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,1.50602959389125,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1993312179167,0,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.717558542755448,0.640672166455702,0.635795703478686,0,0.309157587715317,1.54584324027377,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0.109750285408626,1.1240175325762,0,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0.65147236858747,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.907170879989041,0,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0,0.355123450626254,0.164254312027618,0,0,0.362578348774867,0.802025881213139,0.368323955743585,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.290033387828457,0,0,0.330569830721956,0,0.255225424989168,0,0,1.5740617341532,0.6970372701606,0.308033580176089,0,0,0.37064843820784,1.28812398067792,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0.274537029736055,0,0.202182481573316,0,0.842516912477962,0.975267478179181,0.487426979262569,0,0,0,0,0,0,0.876901770507525,0.578775534266688,0,0.202910376962704,0.6196469961995,0.563391205064483,0,0,0.7133421029625,0,0.211107635297664,0,0,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.706765357169704,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr3:134046037..134046050,+ | |||
|id=chr3:134046037..134046050,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.64e-10!246;CL:0002321!2.95e-10!248;CL:0000548!4.99e-10!679;CL:0000004!4.99e-10!679;CL:0000255!4.99e-10!679;CL:0000012!8.79e-10!682;CL:0000077!1.18e-09!19;CL:0000144!1.02e-08!625;CL:0000066!1.74e-07!254;CL:0000055!2.23e-07!180;CL:0002076!4.59e-07!43;CL:0000003!9.81e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000346;7.11e-34;3!CL:1000428;7.11e-34;3!CL:0002559;1.29e-20;5!CL:0000319;2.32e-12;1!CL:0000159;8.28e-07;2!CL:0002589;8.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,8.46e-34,3;CL:1000428,8.46e-34,3;CL:0002559,1.43e-20,5;CL:0000319,1.11e-12,1;CL:0000159,5.73e-07,2;CL:0002589,8.52e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;2.32e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.11e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0004923!1.05e-08!57;UBERON:0000486!4.58e-08!82;UBERON:0004290!7.51e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;7.11e-34;3!UBERON:0001992;7.11e-34;3!UBERON:0002073;1.29e-20;5!UBERON:0001003;4.31e-12;15!UBERON:0007376;4.31e-12;15!UBERON:0002067;9.95e-12;9!UBERON:0001529;8.28e-07;2!UBERON:0007204;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,8.46e-34,3;UBERON:0001992,8.46e-34,3;UBERON:0002073,1.43e-20,5;UBERON:0005086,1.43e-20,5;UBERON:0001003,5.14e-12,15;UBERON:0007376,5.14e-12,15;UBERON:0007383,5.14e-12,15;UBERON:0002067,1.05e-11,9;UBERON:0004016,1.05e-11,9;UBERON:0010083,1.05e-11,9;UBERON:0001529,8.52e-07,2;UBERON:0007204,8.52e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0,0.491467873003018,3.48900583986214,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,1.50602959389125,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1993312179167,0,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.717558542755448,0.640672166455702,0.635795703478686,0,0.309157587715317,1.54584324027377,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0.109750285408626,1.1240175325762,0,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0.65147236858747,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.907170879989041,0,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0,0.355123450626254,0.164254312027618,0,0,0.362578348774867,0.802025881213139,0.368323955743585,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.290033387828457,0,0,0.330569830721956,0,0.255225424989168,0,0,1.5740617341532,0.6970372701606,0.308033580176089,0,0,0.37064843820784,1.28812398067792,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0.274537029736055,0,0.202182481573316,0,0.842516912477962,0.975267478179181,0.487426979262569,0,0,0,0,0,0,0.876901770507525,0.578775534266688,0,0.202910376962704,0.6196469961995,0.563391205064483,0,0,0.7133421029625,0,0.211107635297664,0,0,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.261177619741208,0,0,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0.157566364614447,0,0,0,0,0,0,0.643012593860077,0.412618309791701,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0.318593534327405,0,0,0.414706207840855,0,0.521745061811734,0.450772826991655,4.56966254602554,0.406870733204662,0,0,0,1.19428766609585,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0.231522474323834,0,0.358177682162975,1.23520578864389,0.877136198314828,0.353378291891762,0.771656153083659,0.168942440653073,0.512483037175893,1.38172136692479,0.607719912354764,0,0,0,0,0.327609848846413,1.72041036127604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0.462102664601353,0,0,0,0.0752103283492573,0.20170506870352,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0.078493092850514,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0.342233301085281,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:134046037..134046050,+ | |||
}} |
Revision as of 21:39, 12 September 2013
Short description: | p@chr3:134046037..134046050, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:134046037..134046050, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 8.46e-34 | 3 |
stem cell of epidermis | 8.46e-34 | 3 |
hair follicle cell | 1.43e-20 | 5 |
mucus secreting cell | 1.11e-12 | 1 |
seromucus secreting cell | 5.73e-07 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 8.46e-34 | 3 |
papillary layer of dermis | 8.46e-34 | 3 |
hair follicle | 1.43e-20 | 5 |
hair follicle placode | 1.43e-20 | 5 |
skin epidermis | 5.14e-12 | 15 |
outer epithelium | 5.14e-12 | 15 |
enveloping layer of ectoderm | 5.14e-12 | 15 |
dermis | 1.05e-11 | 9 |
dermatome | 1.05e-11 | 9 |
future dermis | 1.05e-11 | 9 |
brachiocephalic artery | 8.52e-07 | 2 |
brachiocephalic vasculature | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.11e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.