FFCP PHASE1:Hg19::chr3:133209983..133210005,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-53bp_to_AK128281_5end|coexpression_cluster_id=C900|description=CAGE_peak_2_at_AK128281_5end|id=chr3:133209983..133210005,-|ontology_enrichment_celltype=CL:0000791!2.16e-25!18;CL:0000789!2.16e-25!18;CL:0002420!2.16e-25!18;CL:0002419!2.16e-25!18;CL:0000790!2.16e-25!18;CL:0000542!3.57e-25!53;CL:0000051!3.57e-25!53;CL:0000084!1.46e-23!25;CL:0000827!1.46e-23!25;CL:0000838!1.67e-23!52;CL:0000625!2.47e-16!11;CL:0002087!2.16e-13!119;CL:0000624!1.64e-12!6;CL:0000738!2.90e-12!140;CL:0000898!4.68e-10!3;CL:0002031!9.44e-09!124;CL:0000623!1.04e-08!3;CL:0000825!1.04e-08!3;CL:0000037!1.43e-08!172;CL:0000566!1.43e-08!172;CL:0000842!1.44e-08!3;CL:0000988!1.06e-07!182;CL:0000815!1.44e-07!2;CL:0000792!1.44e-07!2;CL:0002677!1.44e-07!2|ontology_enrichment_celltype_v019=CL:0000084;1.50e-23;25!CL:0000791;2.48e-20;18!CL:0000789;2.48e-20;18!CL:0002419;2.48e-20;18!CL:0000625;2.70e-17;11!CL:0000815;4.90e-17;2!CL:0000792;4.90e-17;2!CL:0002677;4.90e-17;2!CL:0000898;1.14e-11;3|ontology_enrichment_celltype_v019_2=CL:0000084,1.87e-23,25;CL:0000827,1.87e-23,25;CL:0000791,3.24e-20,18;CL:0000789,3.24e-20,18;CL:0002420,3.24e-20,18;CL:0002419,3.24e-20,18;CL:0000790,3.24e-20,18;CL:0000625,3.82e-17,11;CL:0000815,4.54e-17,2;CL:0000792,4.54e-17,2;CL:0002677,4.54e-17,2;CL:0000898,1.09e-11,3;CL:0000838,1.37e-10,52;CL:0000542,2.30e-10,53;CL:0000051,2.30e-10,53|ontology_enrichment_development_v019=CL:0000790;2.48e-20;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!6.29e-17!15;UBERON:0000179!6.29e-17!15;UBERON:0000463!6.29e-17!15;UBERON:0004177!4.48e-10!7;UBERON:0002370!1.42e-07!4;UBERON:0005058!1.42e-07!4;UBERON:0009113!1.42e-07!4;UBERON:0003295!1.42e-07!4;UBERON:0005562!1.42e-07!4;UBERON:0003408!2.96e-07!10;UBERON:0001042!3.30e-07!10;UBERON:0009145!3.30e-07!10|ontology_enrichment_uberon_v019=UBERON:0002370;8.54e-17;2!UBERON:0005058;8.54e-17;2!UBERON:0009113;8.54e-17;2!UBERON:0001301;2.93e-09;1!UBERON:0004177;3.06e-07;5!UBERON:0005057;3.06e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.40e-09,1;UBERON:0002370,6.74e-09,4;UBERON:0005058,6.74e-09,4;UBERON:0009113,6.74e-09,4;UBERON:0003295,6.74e-09,4;UBERON:0005562,6.74e-09,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.774672005803016,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,0,0.822405995998037,3.00935691703221,2.60737813306872,2.8406868344084,0,1.44833593950726,4.12448270464772,2.21533894583621,4.60366568400527,1.79327847615945,2.21100890851793,0.986627427622057,0.276350017785848,0,1.92772532110679,1.87278579662799,0,0.226618685395132,0.766440987203842,1.37450978193052,0.253019692019503,1.27426165729639,1.30216690771284,0.950452044448374,2.40920190524436,2.04778577847069,0,1.18388626022008,0,0.403213486449465,0,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.714695326373367,1.64544909234478,0.648473311192717,1.08006287447623,0,0,0,0,0.557409525377156,0,1.9919716137556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0.992332043623902,0,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-53bp_to_AK128281_5end | |||
|coexpression_cluster_id=C900 | |||
|description=CAGE_peak_2_at_AK128281_5end | |||
|id=chr3:133209983..133210005,- | |||
|ontology_enrichment_celltype=CL:0000791!2.16e-25!18;CL:0000789!2.16e-25!18;CL:0002420!2.16e-25!18;CL:0002419!2.16e-25!18;CL:0000790!2.16e-25!18;CL:0000542!3.57e-25!53;CL:0000051!3.57e-25!53;CL:0000084!1.46e-23!25;CL:0000827!1.46e-23!25;CL:0000838!1.67e-23!52;CL:0000625!2.47e-16!11;CL:0002087!2.16e-13!119;CL:0000624!1.64e-12!6;CL:0000738!2.90e-12!140;CL:0000898!4.68e-10!3;CL:0002031!9.44e-09!124;CL:0000623!1.04e-08!3;CL:0000825!1.04e-08!3;CL:0000037!1.43e-08!172;CL:0000566!1.43e-08!172;CL:0000842!1.44e-08!3;CL:0000988!1.06e-07!182;CL:0000815!1.44e-07!2;CL:0000792!1.44e-07!2;CL:0002677!1.44e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.50e-23;25!CL:0000791;2.48e-20;18!CL:0000789;2.48e-20;18!CL:0002419;2.48e-20;18!CL:0000625;2.70e-17;11!CL:0000815;4.90e-17;2!CL:0000792;4.90e-17;2!CL:0002677;4.90e-17;2!CL:0000898;1.14e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.87e-23,25;CL:0000827,1.87e-23,25;CL:0000791,3.24e-20,18;CL:0000789,3.24e-20,18;CL:0002420,3.24e-20,18;CL:0002419,3.24e-20,18;CL:0000790,3.24e-20,18;CL:0000625,3.82e-17,11;CL:0000815,4.54e-17,2;CL:0000792,4.54e-17,2;CL:0002677,4.54e-17,2;CL:0000898,1.09e-11,3;CL:0000838,1.37e-10,52;CL:0000542,2.30e-10,53;CL:0000051,2.30e-10,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.48e-20;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.29e-17!15;UBERON:0000179!6.29e-17!15;UBERON:0000463!6.29e-17!15;UBERON:0004177!4.48e-10!7;UBERON:0002370!1.42e-07!4;UBERON:0005058!1.42e-07!4;UBERON:0009113!1.42e-07!4;UBERON:0003295!1.42e-07!4;UBERON:0005562!1.42e-07!4;UBERON:0003408!2.96e-07!10;UBERON:0001042!3.30e-07!10;UBERON:0009145!3.30e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.54e-17;2!UBERON:0005058;8.54e-17;2!UBERON:0009113;8.54e-17;2!UBERON:0001301;2.93e-09;1!UBERON:0004177;3.06e-07;5!UBERON:0005057;3.06e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.40e-09,1;UBERON:0002370,6.74e-09,4;UBERON:0005058,6.74e-09,4;UBERON:0009113,6.74e-09,4;UBERON:0003295,6.74e-09,4;UBERON:0005562,6.74e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.774672005803016,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,0,0.822405995998037,3.00935691703221,2.60737813306872,2.8406868344084,0,1.44833593950726,4.12448270464772,2.21533894583621,4.60366568400527,1.79327847615945,2.21100890851793,0.986627427622057,0.276350017785848,0,1.92772532110679,1.87278579662799,0,0.226618685395132,0.766440987203842,1.37450978193052,0.253019692019503,1.27426165729639,1.30216690771284,0.950452044448374,2.40920190524436,2.04778577847069,0,1.18388626022008,0,0.403213486449465,0,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.714695326373367,1.64544909234478,0.648473311192717,1.08006287447623,0,0,0,0,0.557409525377156,0,1.9919716137556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0.992332043623902,0,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32520075409622,2.79336214331361,0,0,0.202117188958219,0.217716747896961,0,0.942928742204225,0.215166616178029,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p2@AK128281 | |||
}} |
Revision as of 21:36, 12 September 2013
Short description: | p2@AK128281 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AK128281_5end |
Coexpression cluster: | C900_CD4_thymus_Hodgkin_CD8_CD34_chronic_CD133 |
Association with transcript: | -53bp_to_AK128281_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.87e-23 | 25 |
pro-T cell | 1.87e-23 | 25 |
mature alpha-beta T cell | 3.24e-20 | 18 |
alpha-beta T cell | 3.24e-20 | 18 |
immature T cell | 3.24e-20 | 18 |
mature T cell | 3.24e-20 | 18 |
immature alpha-beta T cell | 3.24e-20 | 18 |
CD8-positive, alpha-beta T cell | 3.82e-17 | 11 |
regulatory T cell | 4.54e-17 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.54e-17 | 2 |
naive regulatory T cell | 4.54e-17 | 2 |
naive T cell | 1.09e-11 | 3 |
lymphoid lineage restricted progenitor cell | 1.37e-10 | 52 |
lymphocyte | 2.30e-10 | 53 |
common lymphoid progenitor | 2.30e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.40e-09 | 1 |
thymus | 6.74e-09 | 4 |
hemolymphoid system gland | 6.74e-09 | 4 |
thymic region | 6.74e-09 | 4 |
pharyngeal gland | 6.74e-09 | 4 |
thymus primordium | 6.74e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.