FFCP PHASE1:Hg19::chr3:114012837..114012850,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=201633|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26838|TSSclassifier=S|UniProt=Q495A1|association_with_transcript=4bp_to_ENST00000383671,NM_173799_5end|coexpression_cluster_id=C103|description=CAGE_peak_2_at_TIGIT_5end|id=chr3:114012837..114012850,+|ontology_enrichment_celltype=CL:0000791!1.13e-34!18;CL:0000789!1.13e-34!18;CL:0002420!1.13e-34!18;CL:0002419!1.13e-34!18;CL:0000790!1.13e-34!18;CL:0000084!2.63e-26!25;CL:0000827!2.63e-26!25;CL:0000625!3.16e-22!11;CL:0000838!8.00e-18!52;CL:0000542!2.42e-17!53;CL:0000051!2.42e-17!53;CL:0000738!7.33e-16!140;CL:0002087!1.37e-13!119;CL:0000624!1.63e-12!6;CL:0002031!1.45e-11!124;CL:0000037!1.13e-10!172;CL:0000566!1.13e-10!172;CL:0000988!1.83e-09!182;CL:0002032!9.48e-09!165;CL:0000837!9.48e-09!165;CL:0000898!1.66e-07!3|ontology_enrichment_celltype_v019=CL:0000791;4.84e-58;18!CL:0000789;4.84e-58;18!CL:0002419;4.84e-58;18!CL:0000084;3.54e-46;25!CL:0000625;1.17e-45;11!CL:0000624;5.35e-18;6!CL:0000542;1.75e-14;53!CL:0000898;3.51e-14;3!CL:0000623;1.65e-12;3!CL:0000815;3.74e-10;2!CL:0000792;3.74e-10;2!CL:0002677;3.74e-10;2|ontology_enrichment_celltype_v019_2=CL:0000791,5.65e-58,18;CL:0000789,5.65e-58,18;CL:0002420,5.65e-58,18;CL:0002419,5.65e-58,18;CL:0000790,5.65e-58,18;CL:0000084,3.93e-46,25;CL:0000827,3.93e-46,25;CL:0000625,1.62e-45,11;CL:0000838,5.05e-28,52;CL:0000542,2.11e-27,53;CL:0000051,2.11e-27,53;CL:0000624,4.73e-18,6;CL:0000898,3.59e-14,3;CL:0000623,1.76e-12,3;CL:0000825,1.76e-12,3;CL:0002087,3.72e-11,115;CL:0000815,3.74e-10,2;CL:0000792,3.74e-10,2;CL:0002677,3.74e-10,2;CL:0002031,2.35e-09,120;CL:0000738,1.02e-08,136|ontology_enrichment_development_v019=CL:0000790;4.84e-58;18!CL:0000051;1.75e-14;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!1.35e-17!15;UBERON:0000179!1.35e-17!15;UBERON:0000463!1.35e-17!15;UBERON:0007023!2.32e-12!115;UBERON:0002193!1.02e-09!112;UBERON:0002390!1.23e-09!102;UBERON:0003061!1.23e-09!102;UBERON:0004177!2.75e-09!7;UBERON:0002370!8.53e-08!4;UBERON:0005058!8.53e-08!4;UBERON:0009113!8.53e-08!4;UBERON:0003295!8.53e-08!4;UBERON:0005562!8.53e-08!4|ontology_enrichment_uberon_v019=UBERON:0000178;4.38e-26;15!UBERON:0000179;4.38e-26;15!UBERON:0000463;4.38e-26;15!UBERON:0002390;1.57e-12;32!UBERON:0002193;1.49e-10;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.15e-26,15;UBERON:0000179,4.15e-26,15;UBERON:0000463,4.15e-26,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,1.96505381374582,6.16804496998528,4.34684888015763,11.4072793321757,22.7254946752672,3.89653456815823,4.01077644786625,20.6224135232386,22.5964572475294,23.0183284200263,4.86747014957566,8.32379824383221,1.64437904603676,0.276350017785848,0.289803085735052,0,0.535081656179426,1.04535523804977,0.339928028092699,7.2811893784365,11.6833331464094,10.8798467568386,14.0168782302603,13.0216690771284,16.1576847556224,5.72185452495537,7.03926361349301,11.2437653897111,12.3124171062889,15.6014319414999,2.41928091869679,1.06976078313403,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,2.1673383622212,1.07813787429759,1.92514554419623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,2.56146138728266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,5.35246044999663,7.97506062043828,2.62054953003568,3.70226045777575,2.59389324477087,2.16012574895246,7.9312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,3.31540698637377,0,0,0,0,0,0,0,0.197286811273867,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.62373327410012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.314408610199332,1.65695622138878,3.96932817449561,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,1.50374268767766,0.515663103788617,0,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.387533459016037,0.186224142887574,0,0,0,0.217716747896961,0,2.82878622661268,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,2.41528552309231,0.641136984606466|short_description=p2@TIGIT}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=201633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26838 | |||
|TSSclassifier=S | |||
|UniProt=Q495A1 | |||
|association_with_transcript=4bp_to_ENST00000383671,NM_173799_5end | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_2_at_TIGIT_5end | |||
|id=chr3:114012837..114012850,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.13e-34!18;CL:0000789!1.13e-34!18;CL:0002420!1.13e-34!18;CL:0002419!1.13e-34!18;CL:0000790!1.13e-34!18;CL:0000084!2.63e-26!25;CL:0000827!2.63e-26!25;CL:0000625!3.16e-22!11;CL:0000838!8.00e-18!52;CL:0000542!2.42e-17!53;CL:0000051!2.42e-17!53;CL:0000738!7.33e-16!140;CL:0002087!1.37e-13!119;CL:0000624!1.63e-12!6;CL:0002031!1.45e-11!124;CL:0000037!1.13e-10!172;CL:0000566!1.13e-10!172;CL:0000988!1.83e-09!182;CL:0002032!9.48e-09!165;CL:0000837!9.48e-09!165;CL:0000898!1.66e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.84e-58;18!CL:0000789;4.84e-58;18!CL:0002419;4.84e-58;18!CL:0000084;3.54e-46;25!CL:0000625;1.17e-45;11!CL:0000624;5.35e-18;6!CL:0000542;1.75e-14;53!CL:0000898;3.51e-14;3!CL:0000623;1.65e-12;3!CL:0000815;3.74e-10;2!CL:0000792;3.74e-10;2!CL:0002677;3.74e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.65e-58,18;CL:0000789,5.65e-58,18;CL:0002420,5.65e-58,18;CL:0002419,5.65e-58,18;CL:0000790,5.65e-58,18;CL:0000084,3.93e-46,25;CL:0000827,3.93e-46,25;CL:0000625,1.62e-45,11;CL:0000838,5.05e-28,52;CL:0000542,2.11e-27,53;CL:0000051,2.11e-27,53;CL:0000624,4.73e-18,6;CL:0000898,3.59e-14,3;CL:0000623,1.76e-12,3;CL:0000825,1.76e-12,3;CL:0002087,3.72e-11,115;CL:0000815,3.74e-10,2;CL:0000792,3.74e-10,2;CL:0002677,3.74e-10,2;CL:0002031,2.35e-09,120;CL:0000738,1.02e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000790;4.84e-58;18!CL:0000051;1.75e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.35e-17!15;UBERON:0000179!1.35e-17!15;UBERON:0000463!1.35e-17!15;UBERON:0007023!2.32e-12!115;UBERON:0002193!1.02e-09!112;UBERON:0002390!1.23e-09!102;UBERON:0003061!1.23e-09!102;UBERON:0004177!2.75e-09!7;UBERON:0002370!8.53e-08!4;UBERON:0005058!8.53e-08!4;UBERON:0009113!8.53e-08!4;UBERON:0003295!8.53e-08!4;UBERON:0005562!8.53e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.38e-26;15!UBERON:0000179;4.38e-26;15!UBERON:0000463;4.38e-26;15!UBERON:0002390;1.57e-12;32!UBERON:0002193;1.49e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.15e-26,15;UBERON:0000179,4.15e-26,15;UBERON:0000463,4.15e-26,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,1.96505381374582,6.16804496998528,4.34684888015763,11.4072793321757,22.7254946752672,3.89653456815823,4.01077644786625,20.6224135232386,22.5964572475294,23.0183284200263,4.86747014957566,8.32379824383221,1.64437904603676,0.276350017785848,0.289803085735052,0,0.535081656179426,1.04535523804977,0.339928028092699,7.2811893784365,11.6833331464094,10.8798467568386,14.0168782302603,13.0216690771284,16.1576847556224,5.72185452495537,7.03926361349301,11.2437653897111,12.3124171062889,15.6014319414999,2.41928091869679,1.06976078313403,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,2.1673383622212,1.07813787429759,1.92514554419623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,2.56146138728266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,5.35246044999663,7.97506062043828,2.62054953003568,3.70226045777575,2.59389324477087,2.16012574895246,7.9312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,3.31540698637377,0,0,0,0,0,0,0,0.197286811273867,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.62373327410012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.314408610199332,1.65695622138878,3.96932817449561,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,1.50374268767766,0.515663103788617,0,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.387533459016037,0.186224142887574,0,0,0,0.217716747896961,0,2.82878622661268,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,2.41528552309231,0.641136984606466 | |||
|short_description=p2@TIGIT | |||
}} |
Revision as of 20:52, 12 September 2013
Short description: | p2@TIGIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TIGIT_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 4bp_to_ENST00000383671, NM_173799_5end |
EntrezGene: | TIGIT |
HGNC: | 26838 |
UniProt: | Q495A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.65e-58 | 18 |
alpha-beta T cell | 5.65e-58 | 18 |
immature T cell | 5.65e-58 | 18 |
mature T cell | 5.65e-58 | 18 |
immature alpha-beta T cell | 5.65e-58 | 18 |
T cell | 3.93e-46 | 25 |
pro-T cell | 3.93e-46 | 25 |
CD8-positive, alpha-beta T cell | 1.62e-45 | 11 |
lymphoid lineage restricted progenitor cell | 5.05e-28 | 52 |
lymphocyte | 2.11e-27 | 53 |
common lymphoid progenitor | 2.11e-27 | 53 |
CD4-positive, alpha-beta T cell | 4.73e-18 | 6 |
naive T cell | 3.59e-14 | 3 |
natural killer cell | 1.76e-12 | 3 |
pro-NK cell | 1.76e-12 | 3 |
nongranular leukocyte | 3.72e-11 | 115 |
regulatory T cell | 3.74e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.74e-10 | 2 |
naive regulatory T cell | 3.74e-10 | 2 |
hematopoietic lineage restricted progenitor cell | 2.35e-09 | 120 |
leukocyte | 1.02e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 4.15e-26 | 15 |
haemolymphatic fluid | 4.15e-26 | 15 |
organism substance | 4.15e-26 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.