FFCP PHASE1:Hg19::chr3:98515252..98515283,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=131566|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=24627|TSSclassifier=N|UniProt=|association_with_transcript=345bp_to_BC016815_5end|coexpression_cluster_id=C2763|description=CAGE_peak_30_at_DCBLD2_5end|id=chr3:98515252..98515283,-|ontology_enrichment_celltype=CL:0000220!1.33e-08!246;CL:0002321!2.45e-08!248;CL:0000066!1.25e-07!254|ontology_enrichment_celltype_v019=CL:0000064;9.33e-11;3!CL:0000067;9.33e-11;3!CL:0005012;9.33e-11;3!CL:0002304;9.33e-11;3!CL:0000511;1.09e-08;1!CL:0002625;1.09e-08;1!CL:0000228;1.09e-08;1!CL:0000216;1.09e-08;1!CL:0002372;1.09e-08;1!CL:0000306;1.74e-08;4!CL:0002222;1.74e-08;4!CL:0002224;1.74e-08;4|ontology_enrichment_celltype_v019_2=CL:0000064,1.20e-10,3;CL:0000067,1.20e-10,3;CL:0005012,1.20e-10,3;CL:0002304,1.20e-10,3;CL:0000511,5.70e-09,1;CL:0002625,5.70e-09,1;CL:0000216,5.70e-09,1;CL:0000228,6.65e-09,1;CL:0002372,6.65e-09,1;CL:0000306,1.59e-08,4;CL:0002222,1.59e-08,4;CL:0002224,1.59e-08,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!5.87e-10!239;DOID:162!1.52e-08!235;DOID:0050687!7.21e-08!143;DOID:2394!3.64e-07!14|ontology_enrichment_disease_v019=DOID:120;1.77e-09;27!DOID:3111;3.18e-09;1!DOID:3603;3.18e-09;1!DOID:193;8.65e-09;29!DOID:2394;1.07e-08;14|ontology_enrichment_disease_v019_2=DOID:120,1.95e-09,27;DOID:3111,3.06e-09,1;DOID:3603,3.06e-09,1;DOID:193,9.44e-09,29;DOID:2394,1.10e-08,14|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0007625;4.93e-11;11!UBERON:0001778;9.33e-11;3!UBERON:0001775;9.33e-11;3!UBERON:0001801;1.07e-08;14!UBERON:0001136;1.09e-08;1!UBERON:0001343;1.09e-08;1!UBERON:0004910;1.09e-08;1!UBERON:0004813;1.09e-08;1!UBERON:0010077;1.74e-08;4!UBERON:0005389;1.74e-08;4!UBERON:0000484;1.74e-08;4!UBERON:0000965;1.74e-08;4!UBERON:0001803;1.74e-08;4!UBERON:0000488;2.77e-08;4!UBERON:0003133;2.01e-07;44!UBERON:0003134;2.88e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0007625,5.28e-11,11;UBERON:0001778,1.20e-10,3;UBERON:0001775,1.20e-10,3;UBERON:0001136,5.70e-09,1;UBERON:0001343,5.70e-09,1;UBERON:0004910,5.70e-09,1;UBERON:0005154,5.70e-09,1;UBERON:0005295,5.70e-09,1;UBERON:0004813,5.70e-09,1;UBERON:0005297,5.70e-09,1;UBERON:0005294,5.70e-09,1;UBERON:0010141,5.70e-09,1;UBERON:0005891,5.70e-09,1;UBERON:0001801,1.12e-08,14;UBERON:0010077,1.59e-08,4;UBERON:0005389,1.59e-08,4;UBERON:0000484,1.59e-08,4;UBERON:0002546,1.59e-08,4;UBERON:0000965,1.59e-08,4;UBERON:0001803,1.59e-08,4;UBERON:0003073,1.59e-08,4;UBERON:0005426,1.59e-08,4;UBERON:0000488,3.34e-08,4;UBERON:0003133,5.64e-07,48;UBERON:0003134,6.28e-07,37;UBERON:0000474,6.28e-07,37|phase1_expression=0.363356758541113,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0.313454721478088,0,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,1.03988298880475,0.886917589850256,1.31752178539689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0.448346041655403,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,2.88662684050547,0.695582429850461,0.117408694235822,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0.088048434013226,0,0,0.37872730027914,0,0,0,0,0,0.901029173531752,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,2.1100756394171,0.871533458600294,1.09970290300263,0,0,0,0,0,1.42636905040718,0.434343920002738,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.0821271560138091,0.519254429183621,0.348631135379878,0,0.40101294060657,0.184161977871793,0.229628896329213,0.364182336013434,0.131124414959424,0,0.385076685522074,0,0,0.73886140225013,0,0,0.215915916102139,0,0,0,0.509752546090077,0,0.671624264166535,0,0.261435451024901,0.256450125116389,0,0.325378394664303,0,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0.107420244868274,0.290033387828457,0.255679882248303,0,0,0.768760269460425,0,0.6069466851333,0.464845549297286,0,0.6970372701606,0,0.5323060303170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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=131566 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24627 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=345bp_to_BC016815_5end | |||
|coexpression_cluster_id=C2763 | |||
|description=CAGE_peak_30_at_DCBLD2_5end | |||
|id=chr3:98515252..98515283,- | |||
|ontology_enrichment_celltype=CL:0000220!1.33e-08!246;CL:0002321!2.45e-08!248;CL:0000066!1.25e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000064;9.33e-11;3!CL:0000067;9.33e-11;3!CL:0005012;9.33e-11;3!CL:0002304;9.33e-11;3!CL:0000511;1.09e-08;1!CL:0002625;1.09e-08;1!CL:0000228;1.09e-08;1!CL:0000216;1.09e-08;1!CL:0002372;1.09e-08;1!CL:0000306;1.74e-08;4!CL:0002222;1.74e-08;4!CL:0002224;1.74e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.20e-10,3;CL:0000067,1.20e-10,3;CL:0005012,1.20e-10,3;CL:0002304,1.20e-10,3;CL:0000511,5.70e-09,1;CL:0002625,5.70e-09,1;CL:0000216,5.70e-09,1;CL:0000228,6.65e-09,1;CL:0002372,6.65e-09,1;CL:0000306,1.59e-08,4;CL:0002222,1.59e-08,4;CL:0002224,1.59e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!5.87e-10!239;DOID:162!1.52e-08!235;DOID:0050687!7.21e-08!143;DOID:2394!3.64e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:120;1.77e-09;27!DOID:3111;3.18e-09;1!DOID:3603;3.18e-09;1!DOID:193;8.65e-09;29!DOID:2394;1.07e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:120,1.95e-09,27;DOID:3111,3.06e-09,1;DOID:3603,3.06e-09,1;DOID:193,9.44e-09,29;DOID:2394,1.10e-08,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;4.93e-11;11!UBERON:0001778;9.33e-11;3!UBERON:0001775;9.33e-11;3!UBERON:0001801;1.07e-08;14!UBERON:0001136;1.09e-08;1!UBERON:0001343;1.09e-08;1!UBERON:0004910;1.09e-08;1!UBERON:0004813;1.09e-08;1!UBERON:0010077;1.74e-08;4!UBERON:0005389;1.74e-08;4!UBERON:0000484;1.74e-08;4!UBERON:0000965;1.74e-08;4!UBERON:0001803;1.74e-08;4!UBERON:0000488;2.77e-08;4!UBERON:0003133;2.01e-07;44!UBERON:0003134;2.88e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,5.28e-11,11;UBERON:0001778,1.20e-10,3;UBERON:0001775,1.20e-10,3;UBERON:0001136,5.70e-09,1;UBERON:0001343,5.70e-09,1;UBERON:0004910,5.70e-09,1;UBERON:0005154,5.70e-09,1;UBERON:0005295,5.70e-09,1;UBERON:0004813,5.70e-09,1;UBERON:0005297,5.70e-09,1;UBERON:0005294,5.70e-09,1;UBERON:0010141,5.70e-09,1;UBERON:0005891,5.70e-09,1;UBERON:0001801,1.12e-08,14;UBERON:0010077,1.59e-08,4;UBERON:0005389,1.59e-08,4;UBERON:0000484,1.59e-08,4;UBERON:0002546,1.59e-08,4;UBERON:0000965,1.59e-08,4;UBERON:0001803,1.59e-08,4;UBERON:0003073,1.59e-08,4;UBERON:0005426,1.59e-08,4;UBERON:0000488,3.34e-08,4;UBERON:0003133,5.64e-07,48;UBERON:0003134,6.28e-07,37;UBERON:0000474,6.28e-07,37 | |||
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| |||
|short_description=p30@DCBLD2 | |||
}} |
Revision as of 01:39, 13 September 2013
Short description: | p30@DCBLD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_30_at_DCBLD2_5end |
Coexpression cluster: | C2763_mucinous_glioblastoma_Myoblast_myxofibrosarcoma_fibrous_Smooth_squamous |
Association with transcript: | 345bp_to_BC016815_5end |
EntrezGene: | DCBLD2 |
HGNC: | 24627 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.20e-10 | 3 |
ciliated epithelial cell | 1.20e-10 | 3 |
multi-ciliated epithelial cell | 1.20e-10 | 3 |
non-pigmented ciliary epithelial cell | 1.20e-10 | 3 |
androgen binding protein secreting cell | 5.70e-09 | 1 |
seminiferous tubule epithelial cell | 5.70e-09 | 1 |
Sertoli cell | 5.70e-09 | 1 |
multinucleate cell | 6.65e-09 | 1 |
myotube | 6.65e-09 | 1 |
crystallin accumulating cell | 1.59e-08 | 4 |
vertebrate lens cell | 1.59e-08 | 4 |
lens epithelial cell | 1.59e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 5.28e-11 | 11 |
ciliary epithelium | 1.20e-10 | 3 |
ciliary body | 1.20e-10 | 3 |
mesothelium | 5.70e-09 | 1 |
seminiferous tubule of testis | 5.70e-09 | 1 |
epithelium of male gonad | 5.70e-09 | 1 |
epithelial cord | 5.70e-09 | 1 |
sex cord | 5.70e-09 | 1 |
seminiferous tubule epithelium | 5.70e-09 | 1 |
testis sex cord | 5.70e-09 | 1 |
genital ridge | 5.70e-09 | 1 |
primitive sex cord of indifferent gonad | 5.70e-09 | 1 |
coelomic epithelium | 5.70e-09 | 1 |
anterior segment of eyeball | 1.12e-08 | 14 |
cuboidal epithelium | 1.59e-08 | 4 |
transparent eye structure | 1.59e-08 | 4 |
simple cuboidal epithelium | 1.59e-08 | 4 |
cranial placode | 1.59e-08 | 4 |
lens of camera-type eye | 1.59e-08 | 4 |
epithelium of lens | 1.59e-08 | 4 |
lens placode | 1.59e-08 | 4 |
lens vesicle | 1.59e-08 | 4 |
atypical epithelium | 3.34e-08 | 4 |
reproductive organ | 5.64e-07 | 48 |
female reproductive organ | 6.28e-07 | 37 |
female reproductive system | 6.28e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.95e-09 | 27 |
cystadenocarcinoma | 3.06e-09 | 1 |
mucinous cystadenocarcinoma | 3.06e-09 | 1 |
reproductive organ cancer | 9.44e-09 | 29 |
ovarian cancer | 1.10e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.