FFCP PHASE1:Hg19::chr3:82035300..82035307,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000494340_5end|coexpression_cluster_id=C4346|description=CAGE_peak_2_at_ENST00000494340_5end|id=chr3:82035300..82035307,+|ontology_enrichment_celltype=CL:0000039!9.99e-26!7;CL:0000586!9.99e-26!7;CL:0000181!1.39e-21!12;CL:0000417!1.39e-21!12;CL:0000668!1.39e-21!12;CL:0000414!1.39e-21!12;CL:0000412!1.39e-21!12;CL:0000182!1.39e-21!12;CL:0002568!3.06e-08!1;CL:0000223!8.82e-07!59|ontology_enrichment_celltype_v019=CL:0000182;1.81e-25;12!CL:0000039;8.62e-20;7!CL:0000586;8.62e-20;7|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12;CL:0000039,7.13e-20,7;CL:0000586,7.13e-20,7|ontology_enrichment_development_v019=UBERON:0004161;1.07e-27;11!UBERON:0009497;1.39e-23;13!UBERON:0009117;3.47e-14;10!UBERON:0005564;3.47e-14;10!UBERON:0001041;1.09e-10;30!UBERON:0003104;3.71e-10;31|ontology_enrichment_disease=DOID:3095!3.20e-15!22;DOID:2994!3.20e-15!22;DOID:162!2.47e-13!235;DOID:14566!5.75e-13!239;DOID:0050687!2.79e-11!143;DOID:305!9.64e-11!106;DOID:0060085!2.29e-08!1;DOID:3165!2.29e-08!1;DOID:0060121!2.29e-08!1;DOID:2438!2.29e-08!1;DOID:4418!2.29e-08!1;DOID:7!2.32e-08!39;DOID:5662!2.84e-08!1|ontology_enrichment_disease_v019=DOID:7;3.56e-07;39!DOID:3095;5.57e-07;22!DOID:2994;5.57e-07;22|ontology_enrichment_disease_v019_2=DOID:7,2.18e-08,39;DOID:305,3.00e-08,106;DOID:3095,5.24e-07,22;DOID:2994,5.24e-07,22|ontology_enrichment_uberon=UBERON:0000473!5.11e-32!8;UBERON:0003135!3.54e-23!11;UBERON:0002107!1.88e-13!19;UBERON:0006925!1.88e-13!19;UBERON:0008836!1.88e-13!19;UBERON:0000991!6.46e-12!21;UBERON:0009196!6.46e-12!21;UBERON:0009117!6.46e-12!21;UBERON:0005564!6.46e-12!21;UBERON:0008835!1.51e-11!22;UBERON:0003894!1.51e-11!22;UBERON:0004176!2.37e-11!22;UBERON:0003101!2.37e-11!22;UBERON:0000079!2.37e-11!22;UBERON:0009854!5.06e-11!23;UBERON:0007499!4.25e-10!25;UBERON:0009497!4.25e-10!25;UBERON:0000015!4.25e-10!25;UBERON:0002423!4.25e-10!25;UBERON:0006235!4.25e-10!25;UBERON:0004161!4.25e-10!25;UBERON:0005057!1.09e-09!26;UBERON:0009856!1.09e-09!26;UBERON:0001282!1.02e-08!1;UBERON:0009842!1.02e-08!1;UBERON:0003704!1.02e-08!1;UBERON:0001171!1.02e-08!1;UBERON:0001172!1.02e-08!1;UBERON:0002365!4.88e-08!31;UBERON:0002330!4.88e-08!31;UBERON:0002368!4.68e-07!35|ontology_enrichment_uberon_v019=UBERON:0000473;1.85e-17;8!UBERON:0002107;2.05e-16;19!UBERON:0006925;2.05e-16;19!UBERON:0003135;5.42e-13;11!UBERON:0002423;1.13e-12;25!UBERON:0002365;1.09e-10;31!UBERON:0002330;1.09e-10;31!UBERON:0002368;1.46e-08;33!UBERON:0000991;2.86e-07;21!UBERON:0000949;3.55e-07;43!UBERON:0003101;5.57e-07;22!UBERON:0000079;5.57e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.57e-17,8;UBERON:0002107,2.05e-16,19;UBERON:0006925,2.05e-16,19;UBERON:0008836,2.05e-16,19;UBERON:0008835,2.73e-14,22;UBERON:0003894,2.73e-14,22;UBERON:0009854,1.05e-13,23;UBERON:0003135,4.80e-13,11;UBERON:0007499,1.13e-12,25;UBERON:0009497,1.13e-12,25;UBERON:0000015,1.13e-12,25;UBERON:0002423,1.13e-12,25;UBERON:0006235,1.13e-12,25;UBERON:0004161,1.13e-12,25;UBERON:0009856,3.25e-12,26;UBERON:0002365,2.29e-10,31;UBERON:0002330,2.29e-10,31;UBERON:0002368,2.89e-09,35;UBERON:0000949,2.33e-07,45;UBERON:0000991,2.69e-07,21;UBERON:0009196,2.69e-07,21;UBERON:0009117,2.69e-07,21;UBERON:0005564,2.69e-07,21;UBERON:0004176,5.24e-07,22;UBERON:0003101,5.24e-07,22;UBERON:0000079,5.24e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,0.671028323677248,1.16794399198336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0.19980960958213,0,0.229073192331831,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,1.26053091691558,0.329663433524666,1.48287796479207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000494340_5end | |||
|coexpression_cluster_id=C4346 | |||
|description=CAGE_peak_2_at_ENST00000494340_5end | |||
|id=chr3:82035300..82035307,+ | |||
|ontology_enrichment_celltype=CL:0000039!9.99e-26!7;CL:0000586!9.99e-26!7;CL:0000181!1.39e-21!12;CL:0000417!1.39e-21!12;CL:0000668!1.39e-21!12;CL:0000414!1.39e-21!12;CL:0000412!1.39e-21!12;CL:0000182!1.39e-21!12;CL:0002568!3.06e-08!1;CL:0000223!8.82e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.81e-25;12!CL:0000039;8.62e-20;7!CL:0000586;8.62e-20;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12;CL:0000039,7.13e-20,7;CL:0000586,7.13e-20,7 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.07e-27;11!UBERON:0009497;1.39e-23;13!UBERON:0009117;3.47e-14;10!UBERON:0005564;3.47e-14;10!UBERON:0001041;1.09e-10;30!UBERON:0003104;3.71e-10;31 | |||
|ontology_enrichment_disease=DOID:3095!3.20e-15!22;DOID:2994!3.20e-15!22;DOID:162!2.47e-13!235;DOID:14566!5.75e-13!239;DOID:0050687!2.79e-11!143;DOID:305!9.64e-11!106;DOID:0060085!2.29e-08!1;DOID:3165!2.29e-08!1;DOID:0060121!2.29e-08!1;DOID:2438!2.29e-08!1;DOID:4418!2.29e-08!1;DOID:7!2.32e-08!39;DOID:5662!2.84e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:7;3.56e-07;39!DOID:3095;5.57e-07;22!DOID:2994;5.57e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.18e-08,39;DOID:305,3.00e-08,106;DOID:3095,5.24e-07,22;DOID:2994,5.24e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.11e-32!8;UBERON:0003135!3.54e-23!11;UBERON:0002107!1.88e-13!19;UBERON:0006925!1.88e-13!19;UBERON:0008836!1.88e-13!19;UBERON:0000991!6.46e-12!21;UBERON:0009196!6.46e-12!21;UBERON:0009117!6.46e-12!21;UBERON:0005564!6.46e-12!21;UBERON:0008835!1.51e-11!22;UBERON:0003894!1.51e-11!22;UBERON:0004176!2.37e-11!22;UBERON:0003101!2.37e-11!22;UBERON:0000079!2.37e-11!22;UBERON:0009854!5.06e-11!23;UBERON:0007499!4.25e-10!25;UBERON:0009497!4.25e-10!25;UBERON:0000015!4.25e-10!25;UBERON:0002423!4.25e-10!25;UBERON:0006235!4.25e-10!25;UBERON:0004161!4.25e-10!25;UBERON:0005057!1.09e-09!26;UBERON:0009856!1.09e-09!26;UBERON:0001282!1.02e-08!1;UBERON:0009842!1.02e-08!1;UBERON:0003704!1.02e-08!1;UBERON:0001171!1.02e-08!1;UBERON:0001172!1.02e-08!1;UBERON:0002365!4.88e-08!31;UBERON:0002330!4.88e-08!31;UBERON:0002368!4.68e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.85e-17;8!UBERON:0002107;2.05e-16;19!UBERON:0006925;2.05e-16;19!UBERON:0003135;5.42e-13;11!UBERON:0002423;1.13e-12;25!UBERON:0002365;1.09e-10;31!UBERON:0002330;1.09e-10;31!UBERON:0002368;1.46e-08;33!UBERON:0000991;2.86e-07;21!UBERON:0000949;3.55e-07;43!UBERON:0003101;5.57e-07;22!UBERON:0000079;5.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.57e-17,8;UBERON:0002107,2.05e-16,19;UBERON:0006925,2.05e-16,19;UBERON:0008836,2.05e-16,19;UBERON:0008835,2.73e-14,22;UBERON:0003894,2.73e-14,22;UBERON:0009854,1.05e-13,23;UBERON:0003135,4.80e-13,11;UBERON:0007499,1.13e-12,25;UBERON:0009497,1.13e-12,25;UBERON:0000015,1.13e-12,25;UBERON:0002423,1.13e-12,25;UBERON:0006235,1.13e-12,25;UBERON:0004161,1.13e-12,25;UBERON:0009856,3.25e-12,26;UBERON:0002365,2.29e-10,31;UBERON:0002330,2.29e-10,31;UBERON:0002368,2.89e-09,35;UBERON:0000949,2.33e-07,45;UBERON:0000991,2.69e-07,21;UBERON:0009196,2.69e-07,21;UBERON:0009117,2.69e-07,21;UBERON:0005564,2.69e-07,21;UBERON:0004176,5.24e-07,22;UBERON:0003101,5.24e-07,22;UBERON:0000079,5.24e-07,22 | |||
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|short_description=p2@ENST00000494340 | |||
}} |
Revision as of 01:27, 13 September 2013
Short description: | p2@ENST00000494340 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000494340_5end |
Coexpression cluster: | C4346_testicular_acute_hepatocellular_cholangiocellular_hepatoblastoma_teratocarcinoma_gastric |
Association with transcript: | 0bp_to_ENST00000494340_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-25 | 12 |
germ line cell | 7.13e-20 | 7 |
germ cell | 7.13e-20 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.57e-17 | 8 |
liver | 2.05e-16 | 19 |
digestive gland | 2.05e-16 | 19 |
liver bud | 2.05e-16 | 19 |
hepatic diverticulum | 2.73e-14 | 22 |
liver primordium | 2.73e-14 | 22 |
digestive tract diverticulum | 1.05e-13 | 23 |
male reproductive organ | 4.80e-13 | 11 |
epithelial sac | 1.13e-12 | 25 |
epithelium of foregut-midgut junction | 1.13e-12 | 25 |
anatomical boundary | 1.13e-12 | 25 |
hepatobiliary system | 1.13e-12 | 25 |
foregut-midgut junction | 1.13e-12 | 25 |
septum transversum | 1.13e-12 | 25 |
sac | 3.25e-12 | 26 |
exocrine gland | 2.29e-10 | 31 |
exocrine system | 2.29e-10 | 31 |
endocrine gland | 2.89e-09 | 35 |
endocrine system | 2.33e-07 | 45 |
gonad | 2.69e-07 | 21 |
indifferent external genitalia | 2.69e-07 | 21 |
indifferent gonad | 2.69e-07 | 21 |
gonad primordium | 2.69e-07 | 21 |
external genitalia | 5.24e-07 | 22 |
male organism | 5.24e-07 | 22 |
male reproductive system | 5.24e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.18e-08 | 39 |
carcinoma | 3.00e-08 | 106 |
germ cell and embryonal cancer | 5.24e-07 | 22 |
germ cell cancer | 5.24e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.