FFCP PHASE1:Hg19::chr3:52821997..52822012,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3697|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6166|TSSclassifier=N|UniProt=|association_with_transcript=-287bp_to_ENST00000482836_5end|coexpression_cluster_id=C173|description=CAGE_peak_3_at_ITIH1_5end|id=chr3:52821997..52822012,+|ontology_enrichment_celltype=CL:0000136!2.05e-27!15;CL:0002521!1.24e-26!3;CL:0002615!2.91e-26!3;CL:0000325!2.34e-16!39;CL:0000181!3.49e-11!12;CL:0000417!3.49e-11!12;CL:0000668!3.49e-11!12;CL:0000414!3.49e-11!12;CL:0000412!3.49e-11!12;CL:0000182!3.49e-11!12|ontology_enrichment_celltype_v019=CL:0000136;4.91e-62;13!CL:0002521;1.46e-50;3!CL:0002615;6.65e-50;3!CL:0002617;7.98e-10;2|ontology_enrichment_celltype_v019_2=CL:0000136,9.36e-54,15;CL:0002521,1.35e-50,3;CL:0002615,7.24e-50,3;CL:0002617,7.98e-10,2|ontology_enrichment_development_v019=UBERON:0004161;6.16e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002190!1.24e-26!3;UBERON:0002107!1.26e-20!19;UBERON:0006925!1.26e-20!19;UBERON:0008836!1.26e-20!19;UBERON:0005057!2.72e-19!26;UBERON:0008835!1.02e-17!22;UBERON:0003894!1.02e-17!22;UBERON:0009854!6.46e-17!23;UBERON:0002072!3.13e-16!5;UBERON:0007499!1.66e-15!25;UBERON:0009497!1.66e-15!25;UBERON:0000015!1.66e-15!25;UBERON:0002423!1.66e-15!25;UBERON:0006235!1.66e-15!25;UBERON:0004161!1.66e-15!25;UBERON:0009856!6.99e-15!26;UBERON:0002417!1.04e-14!61;UBERON:0000916!1.04e-14!61;UBERON:0003688!1.95e-13!6;UBERON:0002358!1.95e-13!6;UBERON:0003684!1.95e-13!6;UBERON:0001178!1.95e-13!6;UBERON:0002365!2.31e-12!31;UBERON:0002330!2.31e-12!31;UBERON:0004457!1.77e-11!12;UBERON:0000042!1.77e-11!12;UBERON:0002368!7.27e-11!35;UBERON:0007029!1.15e-09!1;UBERON:0009569!1.29e-08!113;UBERON:0005172!1.39e-08!55;UBERON:0005173!1.39e-08!55;UBERON:0000949!2.79e-08!45;UBERON:0003929!8.99e-07!54|ontology_enrichment_uberon_v019=UBERON:0002190;1.46e-50;3!UBERON:0002072;1.10e-30;5!UBERON:0003688;2.23e-25;6!UBERON:0002358;2.23e-25;6!UBERON:0003684;2.23e-25;6!UBERON:0001178;2.23e-25;6!UBERON:0004457;3.63e-17;9!UBERON:0000042;3.63e-17;9!UBERON:0002107;3.70e-14;19!UBERON:0006925;3.70e-14;19!UBERON:0001013;2.09e-11;14!UBERON:0002423;7.69e-11;25!UBERON:0002365;1.01e-08;31!UBERON:0002330;1.01e-08;31!UBERON:0002368;2.08e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.35e-50,3;UBERON:0002072,1.05e-30,5;UBERON:0003688,2.33e-25,6;UBERON:0002358,2.33e-25,6;UBERON:0003684,2.33e-25,6;UBERON:0001178,2.33e-25,6;UBERON:0002107,3.58e-14,19;UBERON:0006925,3.58e-14,19;UBERON:0008836,3.58e-14,19;UBERON:0002417,4.54e-13,60;UBERON:0000916,4.54e-13,60;UBERON:0004457,4.93e-13,12;UBERON:0000042,4.93e-13,12;UBERON:0008835,2.75e-12,22;UBERON:0003894,2.75e-12,22;UBERON:0009854,9.09e-12,23;UBERON:0001013,2.05e-11,14;UBERON:0007499,7.49e-11,25;UBERON:0009497,7.49e-11,25;UBERON:0000015,7.49e-11,25;UBERON:0002423,7.49e-11,25;UBERON:0006235,7.49e-11,25;UBERON:0004161,7.49e-11,25;UBERON:0009856,1.91e-10,26;UBERON:0009569,7.03e-09,112;UBERON:0002365,8.30e-09,31;UBERON:0002330,8.30e-09,31;UBERON:0002368,7.87e-08,35|phase1_expression=0,74.5069823140621,2.96004248601539,5.00366491765652,15.1966772105278,0,58.2589719787114,5.05375898741465,22.4619640251861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,17.2258955585888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3697 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6166 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-287bp_to_ENST00000482836_5end | |||
|coexpression_cluster_id=C173 | |||
|description=CAGE_peak_3_at_ITIH1_5end | |||
|id=chr3:52821997..52822012,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.05e-27!15;CL:0002521!1.24e-26!3;CL:0002615!2.91e-26!3;CL:0000325!2.34e-16!39;CL:0000181!3.49e-11!12;CL:0000417!3.49e-11!12;CL:0000668!3.49e-11!12;CL:0000414!3.49e-11!12;CL:0000412!3.49e-11!12;CL:0000182!3.49e-11!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.91e-62;13!CL:0002521;1.46e-50;3!CL:0002615;6.65e-50;3!CL:0002617;7.98e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.36e-54,15;CL:0002521,1.35e-50,3;CL:0002615,7.24e-50,3;CL:0002617,7.98e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.16e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002190!1.24e-26!3;UBERON:0002107!1.26e-20!19;UBERON:0006925!1.26e-20!19;UBERON:0008836!1.26e-20!19;UBERON:0005057!2.72e-19!26;UBERON:0008835!1.02e-17!22;UBERON:0003894!1.02e-17!22;UBERON:0009854!6.46e-17!23;UBERON:0002072!3.13e-16!5;UBERON:0007499!1.66e-15!25;UBERON:0009497!1.66e-15!25;UBERON:0000015!1.66e-15!25;UBERON:0002423!1.66e-15!25;UBERON:0006235!1.66e-15!25;UBERON:0004161!1.66e-15!25;UBERON:0009856!6.99e-15!26;UBERON:0002417!1.04e-14!61;UBERON:0000916!1.04e-14!61;UBERON:0003688!1.95e-13!6;UBERON:0002358!1.95e-13!6;UBERON:0003684!1.95e-13!6;UBERON:0001178!1.95e-13!6;UBERON:0002365!2.31e-12!31;UBERON:0002330!2.31e-12!31;UBERON:0004457!1.77e-11!12;UBERON:0000042!1.77e-11!12;UBERON:0002368!7.27e-11!35;UBERON:0007029!1.15e-09!1;UBERON:0009569!1.29e-08!113;UBERON:0005172!1.39e-08!55;UBERON:0005173!1.39e-08!55;UBERON:0000949!2.79e-08!45;UBERON:0003929!8.99e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.46e-50;3!UBERON:0002072;1.10e-30;5!UBERON:0003688;2.23e-25;6!UBERON:0002358;2.23e-25;6!UBERON:0003684;2.23e-25;6!UBERON:0001178;2.23e-25;6!UBERON:0004457;3.63e-17;9!UBERON:0000042;3.63e-17;9!UBERON:0002107;3.70e-14;19!UBERON:0006925;3.70e-14;19!UBERON:0001013;2.09e-11;14!UBERON:0002423;7.69e-11;25!UBERON:0002365;1.01e-08;31!UBERON:0002330;1.01e-08;31!UBERON:0002368;2.08e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.35e-50,3;UBERON:0002072,1.05e-30,5;UBERON:0003688,2.33e-25,6;UBERON:0002358,2.33e-25,6;UBERON:0003684,2.33e-25,6;UBERON:0001178,2.33e-25,6;UBERON:0002107,3.58e-14,19;UBERON:0006925,3.58e-14,19;UBERON:0008836,3.58e-14,19;UBERON:0002417,4.54e-13,60;UBERON:0000916,4.54e-13,60;UBERON:0004457,4.93e-13,12;UBERON:0000042,4.93e-13,12;UBERON:0008835,2.75e-12,22;UBERON:0003894,2.75e-12,22;UBERON:0009854,9.09e-12,23;UBERON:0001013,2.05e-11,14;UBERON:0007499,7.49e-11,25;UBERON:0009497,7.49e-11,25;UBERON:0000015,7.49e-11,25;UBERON:0002423,7.49e-11,25;UBERON:0006235,7.49e-11,25;UBERON:0004161,7.49e-11,25;UBERON:0009856,1.91e-10,26;UBERON:0009569,7.03e-09,112;UBERON:0002365,8.30e-09,31;UBERON:0002330,8.30e-09,31;UBERON:0002368,7.87e-08,35 | |||
|phase1_expression=0,74.5069823140621,2.96004248601539,5.00366491765652,15.1966772105278,0,58.2589719787114,5.05375898741465,22.4619640251861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,17.2258955585888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ITIH1 | |||
}} |
Revision as of 00:51, 13 September 2013
Short description: | p3@ITIH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ITIH1_5end |
Coexpression cluster: | C173_Adipocyte_mature_skin_left_Hepatocyte_Osteoblast_adipose |
Association with transcript: | -287bp_to_ENST00000482836_5end |
EntrezGene: | ITIH1 |
HGNC: | 6166 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.36e-54 | 15 |
subcutaneous fat cell | 1.35e-50 | 3 |
adipocyte of omentum tissue | 7.24e-50 | 3 |
adipocyte of breast | 7.98e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.35e-50 | 3 |
hypodermis | 1.05e-30 | 5 |
omentum | 2.33e-25 | 6 |
peritoneum | 2.33e-25 | 6 |
abdominal cavity | 2.33e-25 | 6 |
visceral peritoneum | 2.33e-25 | 6 |
liver | 3.58e-14 | 19 |
digestive gland | 3.58e-14 | 19 |
liver bud | 3.58e-14 | 19 |
abdominal segment of trunk | 4.54e-13 | 60 |
abdomen | 4.54e-13 | 60 |
cavity lining | 4.93e-13 | 12 |
serous membrane | 4.93e-13 | 12 |
hepatic diverticulum | 2.75e-12 | 22 |
liver primordium | 2.75e-12 | 22 |
digestive tract diverticulum | 9.09e-12 | 23 |
adipose tissue | 2.05e-11 | 14 |
epithelial sac | 7.49e-11 | 25 |
epithelium of foregut-midgut junction | 7.49e-11 | 25 |
anatomical boundary | 7.49e-11 | 25 |
hepatobiliary system | 7.49e-11 | 25 |
foregut-midgut junction | 7.49e-11 | 25 |
septum transversum | 7.49e-11 | 25 |
sac | 1.91e-10 | 26 |
subdivision of trunk | 7.03e-09 | 112 |
exocrine gland | 8.30e-09 | 31 |
exocrine system | 8.30e-09 | 31 |
endocrine gland | 7.87e-08 | 35 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.