FFCP PHASE1:Hg19::chr3:50378363..50378383,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11186|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9882|TSSclassifier=S|UniProt=Q9NS23|association_with_transcript=0bp_to_NM_001206957,NM_007182,NM_170714,uc003dad.1,uc003dae.1,uc003daf.1,uc010hlk.1,uc011bdq.1_5end|coexpression_cluster_id=C98|description=CAGE_peak_10_at_RASSF1_5end|id=chr3:50378363..50378383,-|ontology_enrichment_celltype=CL:0000037!1.97e-30!172;CL:0000566!1.97e-30!172;CL:0000988!4.22e-29!182;CL:0002032!7.55e-29!165;CL:0000837!7.55e-29!165;CL:0002031!6.81e-22!124;CL:0000738!1.31e-20!140;CL:0002087!3.40e-20!119;CL:0000838!1.27e-18!52;CL:0000542!5.52e-18!53;CL:0000051!5.52e-18!53;CL:0000791!4.57e-17!18;CL:0000789!4.57e-17!18;CL:0002420!4.57e-17!18;CL:0002419!4.57e-17!18;CL:0000790!4.57e-17!18;CL:0000084!1.33e-15!25;CL:0000827!1.33e-15!25;CL:0000625!2.91e-12!11;CL:0000763!3.00e-12!112;CL:0000049!3.00e-12!112;CL:0000134!8.02e-11!358;CL:0002320!1.08e-10!365;CL:0000219!1.11e-08!390;CL:0002393!1.39e-07!9;CL:0002397!1.39e-07!9;CL:0000839!6.51e-07!70|ontology_enrichment_celltype_v019=CL:0000791;5.79e-33;18!CL:0000789;5.79e-33;18!CL:0002419;5.79e-33;18!CL:0000625;3.52e-31;11!CL:0000084;1.37e-22;25!CL:0000542;3.86e-15;53!CL:0000623;2.72e-10;3!CL:0000097;7.57e-10;5!CL:0000767;1.79e-09;3!CL:0000236;2.57e-09;13!CL:0000226;1.25e-08;3!CL:0000842;1.25e-08;3!CL:0002087;6.94e-08;104|ontology_enrichment_celltype_v019_2=CL:0000791,5.31e-33,18;CL:0000789,5.31e-33,18;CL:0002420,5.31e-33,18;CL:0002419,5.31e-33,18;CL:0000790,5.31e-33,18;CL:0000625,3.63e-31,11;CL:0000838,3.87e-28,52;CL:0000542,1.80e-27,53;CL:0000051,1.80e-27,53;CL:0000084,1.29e-22,25;CL:0000827,1.29e-22,25;CL:0000738,1.57e-22,136;CL:0000037,4.59e-22,168;CL:0000988,2.35e-20,177;CL:0002032,1.80e-18,161;CL:0000837,1.80e-18,161;CL:0002031,6.09e-18,120;CL:0002087,1.73e-17,115;CL:0000623,2.69e-10,3;CL:0000825,2.69e-10,3;CL:0000097,8.23e-10,5;CL:0002028,8.23e-10,5;CL:0000767,1.83e-09,3;CL:0000226,7.95e-09,3;CL:0000842,7.95e-09,3;CL:0000236,8.75e-09,14;CL:0002320,7.71e-07,361|ontology_enrichment_development_v019=CL:0000790;5.79e-33;18!CL:0000051;3.86e-15;53|ontology_enrichment_disease=DOID:1240!1.94e-08!39;DOID:8692!2.70e-08!31;DOID:2531!8.86e-07!51;DOID:0060083!8.86e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.04e-13!102;UBERON:0003061!2.04e-13!102;UBERON:0002193!8.88e-12!112;UBERON:0000178!3.15e-11!15;UBERON:0000179!3.15e-11!15;UBERON:0000463!3.15e-11!15;UBERON:0002384!3.70e-10!375|ontology_enrichment_uberon_v019=UBERON:0000178;4.32e-20;15!UBERON:0000179;4.32e-20;15!UBERON:0000463;4.32e-20;15!UBERON:0002390;2.14e-11;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.88e-20,15;UBERON:0000179,2.88e-20,15;UBERON:0000463,2.88e-20,15;UBERON:0002390,1.36e-08,98;UBERON:0003061,1.36e-08,98;UBERON:0002193,2.57e-07,108|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0,3.93364276848904,3.45446458287491,2.47705797305722,0.919421224478927,0,0,0.0774672005803016,0,2.34880351467878,1.10799081706375,1.40381113229099,1.51907609501096,0,1.29557466407592,0.515151135268373,0.581592955118259,0,0.485168122375632,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0.637812899895131,0.628975936525128,0.112328631146495,0.600707571366025,0.16072558669708,0.285012743741249,1.39241674039363,0.91332076882317,1.75996244461323,0,2.66852776159066,2.98711155796555,0.800791974072025,0.574752439954483,0,1.90810750907073,2.84606484554724,2.34894875748376,2.6759125968766,2.64342657158052,1.12101712596307,1.31692042387539,0.590129310341499,0.393010762749165,1.43921049299656,3.34372990781356,2.60737813306872,0,1.94826728407911,2.78526142212934,2.3568472597987,2.21533894583621,1.62482318259009,1.92136979588513,1.69077151827842,3.12432018746985,5.52700035571697,2.89803085735052,0.14828656316206,0,1.04535523804977,2.71942422474159,0.383220493601921,0,2.53019692019503,4.14135038621326,7.1619179924206,2.85135613334512,3.16207750063323,2.68771883424279,4.99722906209383,2.13099526839615,4.92676798152628,5.64498881029251,6.15112450302067,4.05508330871837,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11186 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9882 | |||
|TSSclassifier=S | |||
|UniProt=Q9NS23 | |||
|association_with_transcript=0bp_to_NM_001206957,NM_007182,NM_170714,uc003dad.1,uc003dae.1,uc003daf.1,uc010hlk.1,uc011bdq.1_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_10_at_RASSF1_5end | |||
|id=chr3:50378363..50378383,- | |||
|ontology_enrichment_celltype=CL:0000037!1.97e-30!172;CL:0000566!1.97e-30!172;CL:0000988!4.22e-29!182;CL:0002032!7.55e-29!165;CL:0000837!7.55e-29!165;CL:0002031!6.81e-22!124;CL:0000738!1.31e-20!140;CL:0002087!3.40e-20!119;CL:0000838!1.27e-18!52;CL:0000542!5.52e-18!53;CL:0000051!5.52e-18!53;CL:0000791!4.57e-17!18;CL:0000789!4.57e-17!18;CL:0002420!4.57e-17!18;CL:0002419!4.57e-17!18;CL:0000790!4.57e-17!18;CL:0000084!1.33e-15!25;CL:0000827!1.33e-15!25;CL:0000625!2.91e-12!11;CL:0000763!3.00e-12!112;CL:0000049!3.00e-12!112;CL:0000134!8.02e-11!358;CL:0002320!1.08e-10!365;CL:0000219!1.11e-08!390;CL:0002393!1.39e-07!9;CL:0002397!1.39e-07!9;CL:0000839!6.51e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.79e-33;18!CL:0000789;5.79e-33;18!CL:0002419;5.79e-33;18!CL:0000625;3.52e-31;11!CL:0000084;1.37e-22;25!CL:0000542;3.86e-15;53!CL:0000623;2.72e-10;3!CL:0000097;7.57e-10;5!CL:0000767;1.79e-09;3!CL:0000236;2.57e-09;13!CL:0000226;1.25e-08;3!CL:0000842;1.25e-08;3!CL:0002087;6.94e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.31e-33,18;CL:0000789,5.31e-33,18;CL:0002420,5.31e-33,18;CL:0002419,5.31e-33,18;CL:0000790,5.31e-33,18;CL:0000625,3.63e-31,11;CL:0000838,3.87e-28,52;CL:0000542,1.80e-27,53;CL:0000051,1.80e-27,53;CL:0000084,1.29e-22,25;CL:0000827,1.29e-22,25;CL:0000738,1.57e-22,136;CL:0000037,4.59e-22,168;CL:0000988,2.35e-20,177;CL:0002032,1.80e-18,161;CL:0000837,1.80e-18,161;CL:0002031,6.09e-18,120;CL:0002087,1.73e-17,115;CL:0000623,2.69e-10,3;CL:0000825,2.69e-10,3;CL:0000097,8.23e-10,5;CL:0002028,8.23e-10,5;CL:0000767,1.83e-09,3;CL:0000226,7.95e-09,3;CL:0000842,7.95e-09,3;CL:0000236,8.75e-09,14;CL:0002320,7.71e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;5.79e-33;18!CL:0000051;3.86e-15;53 | |||
|ontology_enrichment_disease=DOID:1240!1.94e-08!39;DOID:8692!2.70e-08!31;DOID:2531!8.86e-07!51;DOID:0060083!8.86e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.04e-13!102;UBERON:0003061!2.04e-13!102;UBERON:0002193!8.88e-12!112;UBERON:0000178!3.15e-11!15;UBERON:0000179!3.15e-11!15;UBERON:0000463!3.15e-11!15;UBERON:0002384!3.70e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.32e-20;15!UBERON:0000179;4.32e-20;15!UBERON:0000463;4.32e-20;15!UBERON:0002390;2.14e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.88e-20,15;UBERON:0000179,2.88e-20,15;UBERON:0000463,2.88e-20,15;UBERON:0002390,1.36e-08,98;UBERON:0003061,1.36e-08,98;UBERON:0002193,2.57e-07,108 | |||
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| |||
|short_description=p10@RASSF1 | |||
}} |
Revision as of 00:41, 13 September 2013
Short description: | p10@RASSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_RASSF1_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_NM_001206957, NM_007182, NM_170714, uc003dad.1, uc003dae.1, uc003daf.1, uc010hlk.1, uc011bdq.1_5end |
EntrezGene: | RASSF1 |
HGNC: | 9882 |
UniProt: | Q9NS23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.31e-33 | 18 |
alpha-beta T cell | 5.31e-33 | 18 |
immature T cell | 5.31e-33 | 18 |
mature T cell | 5.31e-33 | 18 |
immature alpha-beta T cell | 5.31e-33 | 18 |
CD8-positive, alpha-beta T cell | 3.63e-31 | 11 |
lymphoid lineage restricted progenitor cell | 3.87e-28 | 52 |
lymphocyte | 1.80e-27 | 53 |
common lymphoid progenitor | 1.80e-27 | 53 |
T cell | 1.29e-22 | 25 |
pro-T cell | 1.29e-22 | 25 |
leukocyte | 1.57e-22 | 136 |
hematopoietic stem cell | 4.59e-22 | 168 |
hematopoietic cell | 2.35e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.80e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-18 | 161 |
hematopoietic lineage restricted progenitor cell | 6.09e-18 | 120 |
nongranular leukocyte | 1.73e-17 | 115 |
natural killer cell | 2.69e-10 | 3 |
pro-NK cell | 2.69e-10 | 3 |
mast cell | 8.23e-10 | 5 |
basophil mast progenitor cell | 8.23e-10 | 5 |
basophil | 1.83e-09 | 3 |
single nucleate cell | 7.95e-09 | 3 |
mononuclear cell | 7.95e-09 | 3 |
B cell | 8.75e-09 | 14 |
connective tissue cell | 7.71e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
blood | 2.88e-20 | 15 |
haemolymphatic fluid | 2.88e-20 | 15 |
organism substance | 2.88e-20 | 15 |
hematopoietic system | 1.36e-08 | 98 |
blood island | 1.36e-08 | 98 |
hemolymphoid system | 2.57e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.