FFCP PHASE1:Hg19::chr3:46923759..46923768,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5745|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9608|TSSclassifier=S|UniProt=E7EWE7|association_with_transcript=89bp_to_ENST00000427125,uc003cqn.2_5end|description=CAGE_peak_4_at_PTH1R_5end|id=chr3:46923759..46923768,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002581;5.16e-21;1|ontology_enrichment_celltype_v019_2=CL:0002581,3.45e-21,1|ontology_enrichment_development_v019=UBERON:0000358;2.08e-21;1!UBERON:0003918;4.85e-09;10!UBERON:0007687;4.85e-09;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.62e-30!115;UBERON:0001049!3.30e-16!57;UBERON:0005068!3.30e-16!57;UBERON:0006241!3.30e-16!57;UBERON:0007135!3.30e-16!57;UBERON:0002346!3.51e-14!90;UBERON:0002616!3.87e-14!59;UBERON:0005743!3.22e-13!86;UBERON:0001017!3.38e-13!82;UBERON:0001893!3.53e-13!34;UBERON:0002780!1.14e-12!41;UBERON:0001890!1.14e-12!41;UBERON:0006240!1.14e-12!41;UBERON:0003075!1.79e-12!86;UBERON:0007284!1.79e-12!86;UBERON:0003080!3.14e-12!42;UBERON:0002791!3.31e-12!33;UBERON:0000073!5.47e-12!94;UBERON:0001016!5.47e-12!94;UBERON:0000955!7.79e-12!69;UBERON:0006238!7.79e-12!69;UBERON:0002020!1.69e-11!34;UBERON:0003528!1.69e-11!34;UBERON:0001869!5.33e-11!32;UBERON:0002619!2.34e-09!22;UBERON:0000956!3.94e-09!25;UBERON:0000203!3.94e-09!25;UBERON:0001950!6.27e-09!20;UBERON:0000924!1.16e-07!173;UBERON:0006601!1.16e-07!173;UBERON:0003056!1.28e-07!61|ontology_enrichment_uberon_v019=UBERON:0005795;5.16e-21;1!UBERON:0000996;5.16e-21;1!UBERON:0002426;5.16e-21;1!UBERON:0003831;5.16e-21;1!UBERON:0003898;5.16e-21;1!UBERON:0004830;5.16e-21;1!UBERON:0003830;5.16e-21;1!UBERON:0005175;5.16e-21;1!UBERON:0001774;5.16e-21;1!UBERON:0001103;5.16e-21;1!UBERON:0005090;3.34e-11;2!UBERON:0001630;3.34e-11;2!UBERON:0005406;3.34e-11;2!UBERON:0002331;6.16e-09;10!UBERON:0000922;5.11e-08;49!UBERON:0002106;6.78e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002426,2.82e-21,1;UBERON:0003831,2.82e-21,1;UBERON:0003898,2.82e-21,1;UBERON:0004830,2.82e-21,1;UBERON:0003830,2.82e-21,1;UBERON:0005175,2.82e-21,1;UBERON:0001774,2.82e-21,1;UBERON:0001103,2.82e-21,1;UBERON:0010084,2.82e-21,1;UBERON:0000996,4.22e-21,1;UBERON:0005090,2.47e-11,2;UBERON:0001630,2.47e-11,2;UBERON:0005406,2.73e-11,2;UBERON:0002331,7.07e-09,10;UBERON:0000358,7.07e-09,10;UBERON:0000307,7.07e-09,10;UBERON:0000091,7.07e-09,10;UBERON:0000087,7.07e-09,10;UBERON:0007010,7.07e-09,10;UBERON:0007806,7.07e-09,10;UBERON:0008780,7.07e-09,10;UBERON:0005728,7.07e-09,10;UBERON:0002106,7.26e-08,3;UBERON:0004854,7.26e-08,3;UBERON:0009034,7.26e-08,3;UBERON:0002095,7.26e-08,3;UBERON:0004782,7.26e-08,3;UBERON:0003281,7.26e-08,3;UBERON:0009664,7.26e-08,3;UBERON:0002296,7.26e-08,3;UBERON:0005602,7.26e-08,3;UBERON:0001179,7.26e-08,3;UBERON:0006293,7.26e-08,3|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.276149695926898,0.323292113637624,0,0.302256294682921,0.339121184620975,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,1.48418066444991,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.721287081534056,0.457847324091717,0.577566499444116,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.923403102045565,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0.404406797884062,1.60515529459758,0.234264445725339,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0.677942222341597,0,0,0.12662159191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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9608 | |||
|TSSclassifier=S | |||
|UniProt=E7EWE7 | |||
|association_with_transcript=89bp_to_ENST00000427125,uc003cqn.2_5end | |||
|description=CAGE_peak_4_at_PTH1R_5end | |||
|id=chr3:46923759..46923768,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;5.16e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,3.45e-21,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.08e-21;1!UBERON:0003918;4.85e-09;10!UBERON:0007687;4.85e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.62e-30!115;UBERON:0001049!3.30e-16!57;UBERON:0005068!3.30e-16!57;UBERON:0006241!3.30e-16!57;UBERON:0007135!3.30e-16!57;UBERON:0002346!3.51e-14!90;UBERON:0002616!3.87e-14!59;UBERON:0005743!3.22e-13!86;UBERON:0001017!3.38e-13!82;UBERON:0001893!3.53e-13!34;UBERON:0002780!1.14e-12!41;UBERON:0001890!1.14e-12!41;UBERON:0006240!1.14e-12!41;UBERON:0003075!1.79e-12!86;UBERON:0007284!1.79e-12!86;UBERON:0003080!3.14e-12!42;UBERON:0002791!3.31e-12!33;UBERON:0000073!5.47e-12!94;UBERON:0001016!5.47e-12!94;UBERON:0000955!7.79e-12!69;UBERON:0006238!7.79e-12!69;UBERON:0002020!1.69e-11!34;UBERON:0003528!1.69e-11!34;UBERON:0001869!5.33e-11!32;UBERON:0002619!2.34e-09!22;UBERON:0000956!3.94e-09!25;UBERON:0000203!3.94e-09!25;UBERON:0001950!6.27e-09!20;UBERON:0000924!1.16e-07!173;UBERON:0006601!1.16e-07!173;UBERON:0003056!1.28e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;5.16e-21;1!UBERON:0000996;5.16e-21;1!UBERON:0002426;5.16e-21;1!UBERON:0003831;5.16e-21;1!UBERON:0003898;5.16e-21;1!UBERON:0004830;5.16e-21;1!UBERON:0003830;5.16e-21;1!UBERON:0005175;5.16e-21;1!UBERON:0001774;5.16e-21;1!UBERON:0001103;5.16e-21;1!UBERON:0005090;3.34e-11;2!UBERON:0001630;3.34e-11;2!UBERON:0005406;3.34e-11;2!UBERON:0002331;6.16e-09;10!UBERON:0000922;5.11e-08;49!UBERON:0002106;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,2.82e-21,1;UBERON:0003831,2.82e-21,1;UBERON:0003898,2.82e-21,1;UBERON:0004830,2.82e-21,1;UBERON:0003830,2.82e-21,1;UBERON:0005175,2.82e-21,1;UBERON:0001774,2.82e-21,1;UBERON:0001103,2.82e-21,1;UBERON:0010084,2.82e-21,1;UBERON:0000996,4.22e-21,1;UBERON:0005090,2.47e-11,2;UBERON:0001630,2.47e-11,2;UBERON:0005406,2.73e-11,2;UBERON:0002331,7.07e-09,10;UBERON:0000358,7.07e-09,10;UBERON:0000307,7.07e-09,10;UBERON:0000091,7.07e-09,10;UBERON:0000087,7.07e-09,10;UBERON:0007010,7.07e-09,10;UBERON:0007806,7.07e-09,10;UBERON:0008780,7.07e-09,10;UBERON:0005728,7.07e-09,10;UBERON:0002106,7.26e-08,3;UBERON:0004854,7.26e-08,3;UBERON:0009034,7.26e-08,3;UBERON:0002095,7.26e-08,3;UBERON:0004782,7.26e-08,3;UBERON:0003281,7.26e-08,3;UBERON:0009664,7.26e-08,3;UBERON:0002296,7.26e-08,3;UBERON:0005602,7.26e-08,3;UBERON:0001179,7.26e-08,3;UBERON:0006293,7.26e-08,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.276149695926898,0.323292113637624,0,0.302256294682921,0.339121184620975,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,1.48418066444991,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.721287081534056,0.457847324091717,0.577566499444116,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.923403102045565,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0.404406797884062,1.60515529459758,0.234264445725339,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0.677942222341597,0,0,0.126621591911757,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0.599037001496973,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,2.52178263357434,3.14727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,1.10043013569766,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.319267718114302,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0.795664888465099,0.300841313397029,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0.328863867814245,0,0,0.39246546425257,0.157115589916002,0,0.913158720509496,0,0,0.571812353413251,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0,0.657887425858975,1.16024198352439,0,0,0,0,0,0,0.860037498908708,0,0.203974470572744,0,0.5290268405154,0.371995018166751,0.924351257262837,0,0,0.218531143927391,0.126698501011437,0,0.26721740526556,0,0.250707539292375,0.0757786982182394,0,0,0.413731983447581,0,0.23806443146374,0,0,0,0,0,0.435433495793923,0.342233301085281,0.134704106029175,0.143444410785353,0.99798106963804,0,0,0,0,2.34640942403454,0,1.22068853494722,1.33151354837103,0,0 | |||
|short_description=p4@PTH1R | |||
}} |
Revision as of 00:22, 13 September 2013
Short description: | p4@PTH1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PTH1R_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_ENST00000427125, uc003cqn.2_5end |
EntrezGene: | PTH1R |
HGNC: | 9608 |
UniProt: | E7EWE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 3.45e-21 | 1 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 2.82e-21 | 1 |
respiratory system muscle | 2.82e-21 | 1 |
skeletal muscle of trunk | 2.82e-21 | 1 |
respiratory system skeletal muscle | 2.82e-21 | 1 |
thoracic segment muscle | 2.82e-21 | 1 |
chest organ | 2.82e-21 | 1 |
muscle of trunk | 2.82e-21 | 1 |
diaphragm | 2.82e-21 | 1 |
future diaphragm | 2.82e-21 | 1 |
vagina | 4.22e-21 | 1 |
muscle structure | 2.47e-11 | 2 |
muscle organ | 2.47e-11 | 2 |
perirenal fat | 2.73e-11 | 2 |
umbilical cord | 7.07e-09 | 10 |
blastocyst | 7.07e-09 | 10 |
blastula | 7.07e-09 | 10 |
bilaminar disc | 7.07e-09 | 10 |
inner cell mass | 7.07e-09 | 10 |
cleaving embryo | 7.07e-09 | 10 |
connecting stalk | 7.07e-09 | 10 |
inner cell mass derived epiblast | 7.07e-09 | 10 |
extraembryonic mesoderm | 7.07e-09 | 10 |
spleen | 7.26e-08 | 3 |
gastrointestinal system mesentery | 7.26e-08 | 3 |
stomach region | 7.26e-08 | 3 |
mesentery | 7.26e-08 | 3 |
gastrointestinal system serosa | 7.26e-08 | 3 |
mesentery of stomach | 7.26e-08 | 3 |
gut mesentery | 7.26e-08 | 3 |
dorsal mesentery | 7.26e-08 | 3 |
dorsal mesogastrium | 7.26e-08 | 3 |
peritoneal cavity | 7.26e-08 | 3 |
spleen primordium | 7.26e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.