FFCP PHASE1:Hg19::chr3:46249859..46249874,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1230|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1602|TSSclassifier=S|UniProt=P32246|association_with_transcript=12bp_to_ENST00000296140_5end|coexpression_cluster_id=C392|description=CAGE_peak_4_at_CCR1_5end|id=chr3:46249859..46249874,-|ontology_enrichment_celltype=CL:0000766!2.93e-50!76;CL:0002194!3.56e-50!63;CL:0000576!3.56e-50!63;CL:0000040!3.56e-50!63;CL:0000559!3.56e-50!63;CL:0002009!6.81e-48!65;CL:0002057!7.48e-43!42;CL:0000839!9.03e-43!70;CL:0000557!7.78e-42!71;CL:0000860!9.43e-39!45;CL:0000763!3.35e-36!112;CL:0000049!3.35e-36!112;CL:0002087!1.34e-31!119;CL:0000738!2.14e-30!140;CL:0000037!9.43e-28!172;CL:0000566!9.43e-28!172;CL:0002032!1.04e-26!165;CL:0000837!1.04e-26!165;CL:0002031!3.13e-26!124;CL:0000988!1.65e-24!182;CL:0002393!8.46e-09!9;CL:0002397!8.46e-09!9|ontology_enrichment_celltype_v019=CL:0000473;3.46e-69;39!CL:0000234;3.46e-69;39!CL:0000860;4.36e-68;33!CL:0002057;4.36e-68;33!CL:0000576;6.88e-63;48!CL:0000766;9.63e-49;69!CL:0000763;1.47e-24;100!CL:0000235;3.92e-16;6!CL:0002087;5.73e-15;104!CL:0000738;2.66e-14;136!CL:0000094;1.18e-12;8!CL:0002393;6.52e-12;6!CL:0002397;6.52e-12;6!CL:0000988;4.93e-09;177!CL:0000081;6.39e-09;11!CL:0002619;1.74e-08;3!CL:0000219;7.11e-08;193!CL:0000767;4.73e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,9.96e-119,72;CL:0002194,3.37e-116,59;CL:0000576,3.37e-116,59;CL:0000040,3.37e-116,59;CL:0000559,3.37e-116,59;CL:0002009,6.15e-112,61;CL:0000839,2.13e-102,66;CL:0000473,2.16e-102,48;CL:0000234,2.16e-102,48;CL:0000557,1.17e-100,67;CL:0000860,4.92e-87,42;CL:0002057,4.92e-87,42;CL:0000763,9.51e-82,108;CL:0000049,9.51e-82,108;CL:0000738,1.23e-61,136;CL:0002087,4.72e-59,115;CL:0002031,6.77e-54,120;CL:0002032,4.50e-53,161;CL:0000837,4.50e-53,161;CL:0000037,7.22e-52,168;CL:0000988,2.38e-48,177;CL:0000134,4.62e-18,354;CL:0002320,2.27e-17,361;CL:0000235,3.69e-16,6;CL:0000219,6.12e-15,386;CL:0002393,1.12e-13,9;CL:0002397,1.12e-13,9;CL:0000094,8.59e-13,8;CL:0000048,5.50e-12,427;CL:0000723,1.40e-11,433;CL:0000034,4.66e-11,441;CL:0000081,5.13e-09,11;CL:0002619,1.72e-08,3;CL:0000767,4.00e-07,3|ontology_enrichment_development_v019=CL:0002057;2.62e-63;42!CL:0000049;2.61e-24;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.29e-51!102;UBERON:0003061!6.29e-51!102;UBERON:0002193!4.52e-46!112;UBERON:0002371!6.79e-42!80;UBERON:0001474!3.19e-37!86;UBERON:0002405!1.51e-31!115;UBERON:0004765!4.99e-31!101;UBERON:0001434!4.99e-31!101;UBERON:0007023!5.47e-23!115;UBERON:0003081!8.30e-15!216;UBERON:0002204!6.49e-12!167;UBERON:0001049!2.83e-07!57;UBERON:0005068!2.83e-07!57;UBERON:0006241!2.83e-07!57;UBERON:0007135!2.83e-07!57;UBERON:0000178!8.94e-07!15;UBERON:0000179!8.94e-07!15;UBERON:0000463!8.94e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.48e-08;15!UBERON:0000179;1.48e-08;15!UBERON:0000463;1.48e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.12e-92,98;UBERON:0003061,1.12e-92,98;UBERON:0002371,1.05e-90,76;UBERON:0001474,5.45e-83,82;UBERON:0002193,1.42e-82,108;UBERON:0004765,2.75e-74,90;UBERON:0002405,4.12e-74,93;UBERON:0001434,2.38e-65,100;UBERON:0003081,2.20e-37,203;UBERON:0002204,5.38e-33,167;UBERON:0000926,9.61e-20,315;UBERON:0004120,9.61e-20,315;UBERON:0006603,9.61e-20,315;UBERON:0002384,3.14e-17,371;UBERON:0000178,1.54e-08,15;UBERON:0000179,1.54e-08,15;UBERON:0000463,1.54e-08,15|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.246301768349837,0.0787107813136792,2.36018566109342,1.91914699048606,2.16742572642506,0,0,0,0,0,0.293600439334847,1.10799081706375,1.20326668482085,1.30206522429511,7.16529517567758,8.74512898251245,7.98484259665978,6.83371722263954,6.42389104270976,4.36651310138069,6.27558399645349,9.86802931252382,4.64559556342655,20.1384674625505,10.5025889676931,11.8241114944293,6.55016793399575,5.16387746867061,6.77132432971709,6.02375486536335,8.73299680185107,8.53949240891322,3.67300670845083,6.73950956859797,4.47535988059329,10.2253903057882,10.1726465387032,9.80316926225197,6.09439401120026,3.97169657283798,1.24564449799115,15.3261685806613,10.429658368404,17.3751075764093,7.26479403160043,3.68277635987565,4.43047342417238,1.90129757680748,1.91343869968539,1.67726916406701,3.70684482783434,3.00353785683013,3.85741408072992,2.85012743741249,0.99458338599545,1.46131323011707,0,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.779873198196215,0,0,0,0.25618263945135,0.260118695119756,0.493313713811028,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,1.18388626022008,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,3.8945687238562,4.17911369518241,4.65352861816028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1602 | |||
|TSSclassifier=S | |||
|UniProt=P32246 | |||
|association_with_transcript=12bp_to_ENST00000296140_5end | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_4_at_CCR1_5end | |||
|id=chr3:46249859..46249874,- | |||
|ontology_enrichment_celltype=CL:0000766!2.93e-50!76;CL:0002194!3.56e-50!63;CL:0000576!3.56e-50!63;CL:0000040!3.56e-50!63;CL:0000559!3.56e-50!63;CL:0002009!6.81e-48!65;CL:0002057!7.48e-43!42;CL:0000839!9.03e-43!70;CL:0000557!7.78e-42!71;CL:0000860!9.43e-39!45;CL:0000763!3.35e-36!112;CL:0000049!3.35e-36!112;CL:0002087!1.34e-31!119;CL:0000738!2.14e-30!140;CL:0000037!9.43e-28!172;CL:0000566!9.43e-28!172;CL:0002032!1.04e-26!165;CL:0000837!1.04e-26!165;CL:0002031!3.13e-26!124;CL:0000988!1.65e-24!182;CL:0002393!8.46e-09!9;CL:0002397!8.46e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.46e-69;39!CL:0000234;3.46e-69;39!CL:0000860;4.36e-68;33!CL:0002057;4.36e-68;33!CL:0000576;6.88e-63;48!CL:0000766;9.63e-49;69!CL:0000763;1.47e-24;100!CL:0000235;3.92e-16;6!CL:0002087;5.73e-15;104!CL:0000738;2.66e-14;136!CL:0000094;1.18e-12;8!CL:0002393;6.52e-12;6!CL:0002397;6.52e-12;6!CL:0000988;4.93e-09;177!CL:0000081;6.39e-09;11!CL:0002619;1.74e-08;3!CL:0000219;7.11e-08;193!CL:0000767;4.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.96e-119,72;CL:0002194,3.37e-116,59;CL:0000576,3.37e-116,59;CL:0000040,3.37e-116,59;CL:0000559,3.37e-116,59;CL:0002009,6.15e-112,61;CL:0000839,2.13e-102,66;CL:0000473,2.16e-102,48;CL:0000234,2.16e-102,48;CL:0000557,1.17e-100,67;CL:0000860,4.92e-87,42;CL:0002057,4.92e-87,42;CL:0000763,9.51e-82,108;CL:0000049,9.51e-82,108;CL:0000738,1.23e-61,136;CL:0002087,4.72e-59,115;CL:0002031,6.77e-54,120;CL:0002032,4.50e-53,161;CL:0000837,4.50e-53,161;CL:0000037,7.22e-52,168;CL:0000988,2.38e-48,177;CL:0000134,4.62e-18,354;CL:0002320,2.27e-17,361;CL:0000235,3.69e-16,6;CL:0000219,6.12e-15,386;CL:0002393,1.12e-13,9;CL:0002397,1.12e-13,9;CL:0000094,8.59e-13,8;CL:0000048,5.50e-12,427;CL:0000723,1.40e-11,433;CL:0000034,4.66e-11,441;CL:0000081,5.13e-09,11;CL:0002619,1.72e-08,3;CL:0000767,4.00e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.62e-63;42!CL:0000049;2.61e-24;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.29e-51!102;UBERON:0003061!6.29e-51!102;UBERON:0002193!4.52e-46!112;UBERON:0002371!6.79e-42!80;UBERON:0001474!3.19e-37!86;UBERON:0002405!1.51e-31!115;UBERON:0004765!4.99e-31!101;UBERON:0001434!4.99e-31!101;UBERON:0007023!5.47e-23!115;UBERON:0003081!8.30e-15!216;UBERON:0002204!6.49e-12!167;UBERON:0001049!2.83e-07!57;UBERON:0005068!2.83e-07!57;UBERON:0006241!2.83e-07!57;UBERON:0007135!2.83e-07!57;UBERON:0000178!8.94e-07!15;UBERON:0000179!8.94e-07!15;UBERON:0000463!8.94e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.48e-08;15!UBERON:0000179;1.48e-08;15!UBERON:0000463;1.48e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.12e-92,98;UBERON:0003061,1.12e-92,98;UBERON:0002371,1.05e-90,76;UBERON:0001474,5.45e-83,82;UBERON:0002193,1.42e-82,108;UBERON:0004765,2.75e-74,90;UBERON:0002405,4.12e-74,93;UBERON:0001434,2.38e-65,100;UBERON:0003081,2.20e-37,203;UBERON:0002204,5.38e-33,167;UBERON:0000926,9.61e-20,315;UBERON:0004120,9.61e-20,315;UBERON:0006603,9.61e-20,315;UBERON:0002384,3.14e-17,371;UBERON:0000178,1.54e-08,15;UBERON:0000179,1.54e-08,15;UBERON:0000463,1.54e-08,15 | |||
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| |||
|short_description=p4@CCR1 | |||
}} |
Revision as of 00:19, 13 September 2013
Short description: | p4@CCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CCR1_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 12bp_to_ENST00000296140_5end |
EntrezGene: | CCR1 |
HGNC: | 1602 |
UniProt: | P32246 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.12e-92 | 98 |
blood island | 1.12e-92 | 98 |
bone marrow | 1.05e-90 | 76 |
bone element | 5.45e-83 | 82 |
hemolymphoid system | 1.42e-82 | 108 |
skeletal element | 2.75e-74 | 90 |
immune system | 4.12e-74 | 93 |
skeletal system | 2.38e-65 | 100 |
lateral plate mesoderm | 2.20e-37 | 203 |
musculoskeletal system | 5.38e-33 | 167 |
mesoderm | 9.61e-20 | 315 |
mesoderm-derived structure | 9.61e-20 | 315 |
presumptive mesoderm | 9.61e-20 | 315 |
connective tissue | 3.14e-17 | 371 |
blood | 1.54e-08 | 15 |
haemolymphatic fluid | 1.54e-08 | 15 |
organism substance | 1.54e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.