FFCP PHASE1:Hg19::chr3:30647847..30647854,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7048|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11773|TSSclassifier=S|UniProt=P37173,D2JYI1,A3QNQ0|association_with_transcript=-139bp_to_ENST00000295754,NM_001024847,NM_003242,uc003cen.2,uc003ceo.2_5end|description=CAGE_peak_9_at_TGFBR2_5end|id=chr3:30647847..30647854,+|ontology_enrichment_celltype=CL:0002139!6.37e-10!24;CL:0000791!6.62e-09!18;CL:0000789!6.62e-09!18;CL:0002420!6.62e-09!18;CL:0002419!6.62e-09!18;CL:0000790!6.62e-09!18;CL:0000084!7.77e-09!25;CL:0000827!7.77e-09!25;CL:0000071!1.16e-07!18;CL:0002546!1.16e-07!18|ontology_enrichment_celltype_v019=CL:0000784;4.22e-43;3!CL:0000624;9.89e-22;6!CL:0000451;2.84e-12;10!CL:0000084;2.58e-09;25!CL:0000815;2.23e-08;2!CL:0000792;2.23e-08;2!CL:0002677;2.23e-08;2!CL:0000791;1.20e-07;18!CL:0000789;1.20e-07;18!CL:0002419;1.20e-07;18|ontology_enrichment_celltype_v019_2=CL:0000784,3.94e-43,3;CL:0000624,7.19e-22,6;CL:0000451,2.79e-12,10;CL:0000084,2.58e-09,25;CL:0000827,2.58e-09,25;CL:0000815,1.61e-08,2;CL:0000792,1.61e-08,2;CL:0002677,1.61e-08,2;CL:0000791,1.09e-07,18;CL:0000789,1.09e-07,18;CL:0002420,1.09e-07,18;CL:0002419,1.09e-07,18;CL:0000790,1.09e-07,18|ontology_enrichment_development_v019=CL:0000790;1.20e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!1.16e-07!18;UBERON:0004638!1.16e-07!18;UBERON:0004852!1.16e-07!18;UBERON:0000487!7.62e-07!22;UBERON:0006914!9.85e-07!25|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,1.7703879310245,1.17903228824749,0.822405995998037,0,1.95553359980154,0.946895611469467,0,0,0,0,0,0,0,0,0,0,2.37258501059297,2.94294910898684,0,0.113309342697566,0.383220493601921,0.34362744548263,0,0.637130828648193,0,0,0.451725357233318,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,1.90792499444274,1.14398982156026,2.60020250930695,0.39752481473341,0,1.38856200643038,0,0,0.825354125820202,0.626984899610432,1.29208379584664,0,0.33472061276467,0.402829317109147,1.52054421143703,0.976248230192678,0.735326160691737,0,0.0892997282840798,0.44905874525234,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0.394061520403854,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.74709290462411,0,0,0,0,0,0.280660094433074,0,0,0.321707842287215,0,0.308419387605311,0,0.246381468041427,0,0,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0.170093705276516,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,1.58625035258854,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0.31900115973192,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0.248505071130865,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7048 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11773 | |||
|TSSclassifier=S | |||
|UniProt=P37173,D2JYI1,A3QNQ0 | |||
|association_with_transcript=-139bp_to_ENST00000295754,NM_001024847,NM_003242,uc003cen.2,uc003ceo.2_5end | |||
|description=CAGE_peak_9_at_TGFBR2_5end | |||
|id=chr3:30647847..30647854,+ | |||
|ontology_enrichment_celltype=CL:0002139!6.37e-10!24;CL:0000791!6.62e-09!18;CL:0000789!6.62e-09!18;CL:0002420!6.62e-09!18;CL:0002419!6.62e-09!18;CL:0000790!6.62e-09!18;CL:0000084!7.77e-09!25;CL:0000827!7.77e-09!25;CL:0000071!1.16e-07!18;CL:0002546!1.16e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.22e-43;3!CL:0000624;9.89e-22;6!CL:0000451;2.84e-12;10!CL:0000084;2.58e-09;25!CL:0000815;2.23e-08;2!CL:0000792;2.23e-08;2!CL:0002677;2.23e-08;2!CL:0000791;1.20e-07;18!CL:0000789;1.20e-07;18!CL:0002419;1.20e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.94e-43,3;CL:0000624,7.19e-22,6;CL:0000451,2.79e-12,10;CL:0000084,2.58e-09,25;CL:0000827,2.58e-09,25;CL:0000815,1.61e-08,2;CL:0000792,1.61e-08,2;CL:0002677,1.61e-08,2;CL:0000791,1.09e-07,18;CL:0000789,1.09e-07,18;CL:0002420,1.09e-07,18;CL:0002419,1.09e-07,18;CL:0000790,1.09e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.20e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.16e-07!18;UBERON:0004638!1.16e-07!18;UBERON:0004852!1.16e-07!18;UBERON:0000487!7.62e-07!22;UBERON:0006914!9.85e-07!25 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,1.7703879310245,1.17903228824749,0.822405995998037,0,1.95553359980154,0.946895611469467,0,0,0,0,0,0,0,0,0,0,2.37258501059297,2.94294910898684,0,0.113309342697566,0.383220493601921,0.34362744548263,0,0.637130828648193,0,0,0.451725357233318,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,1.90792499444274,1.14398982156026,2.60020250930695,0.39752481473341,0,1.38856200643038,0,0,0.825354125820202,0.626984899610432,1.29208379584664,0,0.33472061276467,0.402829317109147,1.52054421143703,0.976248230192678,0.735326160691737,0,0.0892997282840798,0.44905874525234,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0.394061520403854,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.74709290462411,0,0,0,0,0,0.280660094433074,0,0,0.321707842287215,0,0.308419387605311,0,0.246381468041427,0,0,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0.170093705276516,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,1.58625035258854,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0.31900115973192,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0.248505071130865,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0.919036730290385,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,2.07377898544228,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.463044948647668,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0,0.387533459016037,0.496597714366863,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0.106727345877715,0,0.179650404213174,0,0.244482888365733,0,0,0.603821380773079,0 | |||
|short_description=p9@TGFBR2 | |||
}} |
Revision as of 23:48, 12 September 2013
Short description: | p9@TGFBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_TGFBR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -139bp_to_ENST00000295754, NM_001024847, NM_003242, uc003cen.2, uc003ceo.2_5end |
EntrezGene: | TGFBR2 |
HGNC: | 11773 |
UniProt: | P37173D2JYI1A3QNQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.94e-43 | 3 |
CD4-positive, alpha-beta T cell | 7.19e-22 | 6 |
dendritic cell | 2.79e-12 | 10 |
T cell | 2.58e-09 | 25 |
pro-T cell | 2.58e-09 | 25 |
regulatory T cell | 1.61e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.61e-08 | 2 |
naive regulatory T cell | 1.61e-08 | 2 |
mature alpha-beta T cell | 1.09e-07 | 18 |
alpha-beta T cell | 1.09e-07 | 18 |
immature T cell | 1.09e-07 | 18 |
mature T cell | 1.09e-07 | 18 |
immature alpha-beta T cell | 1.09e-07 | 18 |
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