FFCP PHASE1:Hg19::chr3:13057835..13057855,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1662|description=CAGE_peak_at_chr3:13057835..13057855,-|id=chr3:13057835..13057855,-|ontology_enrichment_celltype=CL:0000738!8.53e-72!140;CL:0000037!1.07e-64!172;CL:0000566!1.07e-64!172;CL:0002087!2.90e-62!119;CL:0000988!6.82e-60!182;CL:0002032!2.17e-56!165;CL:0000837!2.17e-56!165;CL:0002057!2.55e-53!42;CL:0002031!1.10e-52!124;CL:0000860!5.72e-49!45;CL:0000766!1.85e-46!76;CL:0002194!3.22e-37!63;CL:0000576!3.22e-37!63;CL:0000040!3.22e-37!63;CL:0000559!3.22e-37!63;CL:0002009!1.03e-35!65;CL:0000763!4.49e-34!112;CL:0000049!4.49e-34!112;CL:0000839!2.52e-32!70;CL:0000557!1.05e-31!71;CL:0000838!6.42e-20!52;CL:0000542!2.17e-19!53;CL:0000051!2.17e-19!53;CL:0000134!2.54e-19!358;CL:0002393!6.21e-19!9;CL:0002397!6.21e-19!9;CL:0002320!1.59e-18!365;CL:0000094!2.15e-17!8;CL:0000219!9.84e-16!390;CL:0000034!8.15e-14!444;CL:0000048!5.40e-13!430;CL:0000723!1.62e-12!436;CL:0000081!4.00e-12!11;CL:0000945!6.05e-10!24;CL:0000826!6.05e-10!24;CL:0000625!1.19e-09!11;CL:0000791!2.99e-08!18;CL:0000789!2.99e-08!18;CL:0002420!2.99e-08!18;CL:0002419!2.99e-08!18;CL:0000790!2.99e-08!18;CL:0000084!7.97e-08!25;CL:0000827!7.97e-08!25;CL:0000784!1.06e-07!3;CL:0000775!1.34e-07!3;CL:0000767!1.87e-07!3;CL:0000875!2.08e-07!3;CL:0002396!2.08e-07!3;CL:0000842!6.32e-07!3|ontology_enrichment_celltype_v019=CL:0000094;2.14e-46;8!CL:0002393;1.48e-34;6!CL:0002397;1.48e-34;6!CL:0000081;1.96e-33;11!CL:0000766;7.52e-25;69!CL:0000576;1.44e-24;48!CL:0000784;6.42e-19;3!CL:0000775;1.52e-18;3!CL:0000767;3.25e-18;3!CL:0000875;5.49e-18;3!CL:0002396;5.49e-18;3!CL:0000860;5.33e-14;33!CL:0002057;5.33e-14;33!CL:0000771;3.38e-13;2!CL:0000473;1.09e-10;39!CL:0000234;1.09e-10;39!CL:0000763;5.78e-10;100!CL:0000738;1.90e-09;136!CL:0002087;4.42e-08;104|ontology_enrichment_celltype_v019_2=CL:0000766,1.68e-56,72;CL:0002393,6.94e-51,9;CL:0002397,6.94e-51,9;CL:0000094,1.75e-46,8;CL:0000860,1.01e-44,42;CL:0002057,1.01e-44,42;CL:0000738,7.96e-43,136;CL:0000473,1.25e-38,48;CL:0000234,1.25e-38,48;CL:0000763,5.01e-36,108;CL:0000049,5.01e-36,108;CL:0002194,9.79e-34,59;CL:0000576,9.79e-34,59;CL:0000040,9.79e-34,59;CL:0000559,9.79e-34,59;CL:0000037,1.35e-33,168;CL:0000081,1.70e-33,11;CL:0002009,1.65e-32,61;CL:0000988,1.35e-31,177;CL:0000839,9.13e-30,66;CL:0000557,2.89e-29,67;CL:0002032,2.30e-28,161;CL:0000837,2.30e-28,161;CL:0002087,2.99e-23,115;CL:0002031,5.05e-20,120;CL:0000784,6.42e-19,3;CL:0000775,1.23e-18,3;CL:0000767,3.16e-18,3;CL:0000875,4.23e-18,3;CL:0002396,4.23e-18,3;CL:0000771,3.48e-13,2;CL:0000134,8.58e-13,354;CL:0002320,2.01e-12,361;CL:0000219,3.99e-11,386;CL:0000034,6.61e-10,441;CL:0000048,1.56e-09,427;CL:0000723,2.59e-09,433|ontology_enrichment_development_v019=CL:0002057;1.37e-31;42!CL:0000049;1.06e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.67e-37!102;UBERON:0003061!1.67e-37!102;UBERON:0002193!3.35e-34!112;UBERON:0002371!3.98e-30!80;UBERON:0001474!3.56e-27!86;UBERON:0002405!1.13e-22!115;UBERON:0004765!2.36e-21!101;UBERON:0001434!2.36e-21!101;UBERON:0002384!3.81e-18!375;UBERON:0003081!8.72e-11!216;UBERON:0002204!9.31e-10!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.40e-25,76;UBERON:0001474,3.31e-23,82;UBERON:0002390,6.05e-21,98;UBERON:0003061,6.05e-21,98;UBERON:0004765,8.60e-21,90;UBERON:0002405,5.42e-20,93;UBERON:0002193,1.30e-18,108;UBERON:0001434,2.60e-18,100;UBERON:0002384,6.38e-12,371;UBERON:0002204,2.46e-09,167;UBERON:0003081,6.63e-08,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.236132343941038,4.72037132218685,2.68680578668049,3.09632246632152,0,0,0,0.0774672005803016,0.142169232487422,0.587200878669695,6.09394949385065,1.40381113229099,4.12320654360118,0,0.32389366601898,0,0,0,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,2.01384674625505,0.256160706529101,0.236482229888585,0.689491361473237,0,1.35426486594342,1.69418105588344,0.272906150057846,0.898893937780338,0.306083892370903,0.320929027076094,1.91801137739712,0.329851300186716,1.39624560335142,1.70489900213078,0.290209238628584,0.56738522469114,0,0.502497330513487,1.0429658368404,0.65156653411535,0,0,0.949387162322653,4.01385043992689,2.55125159958052,3.77385561915077,6.9643751310827,2.10247649978109,1.12507910687956,7.98035682475496,2.98375015798635,1.64397738388171,0,2.18455444504853,0,0,0.400395987036012,0.574752439954483,0,0.954053754535364,0.569212969109448,1.76171156811282,0.382273228125229,1.32171328579026,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0.651083453856419,0.950452044448374,0,0.383959833463255,0,0.473554504088034,0,0.201606743224732,0.26744019578350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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1662 | |||
|description=CAGE_peak_at_chr3:13057835..13057855,- | |||
|id=chr3:13057835..13057855,- | |||
|ontology_enrichment_celltype=CL:0000738!8.53e-72!140;CL:0000037!1.07e-64!172;CL:0000566!1.07e-64!172;CL:0002087!2.90e-62!119;CL:0000988!6.82e-60!182;CL:0002032!2.17e-56!165;CL:0000837!2.17e-56!165;CL:0002057!2.55e-53!42;CL:0002031!1.10e-52!124;CL:0000860!5.72e-49!45;CL:0000766!1.85e-46!76;CL:0002194!3.22e-37!63;CL:0000576!3.22e-37!63;CL:0000040!3.22e-37!63;CL:0000559!3.22e-37!63;CL:0002009!1.03e-35!65;CL:0000763!4.49e-34!112;CL:0000049!4.49e-34!112;CL:0000839!2.52e-32!70;CL:0000557!1.05e-31!71;CL:0000838!6.42e-20!52;CL:0000542!2.17e-19!53;CL:0000051!2.17e-19!53;CL:0000134!2.54e-19!358;CL:0002393!6.21e-19!9;CL:0002397!6.21e-19!9;CL:0002320!1.59e-18!365;CL:0000094!2.15e-17!8;CL:0000219!9.84e-16!390;CL:0000034!8.15e-14!444;CL:0000048!5.40e-13!430;CL:0000723!1.62e-12!436;CL:0000081!4.00e-12!11;CL:0000945!6.05e-10!24;CL:0000826!6.05e-10!24;CL:0000625!1.19e-09!11;CL:0000791!2.99e-08!18;CL:0000789!2.99e-08!18;CL:0002420!2.99e-08!18;CL:0002419!2.99e-08!18;CL:0000790!2.99e-08!18;CL:0000084!7.97e-08!25;CL:0000827!7.97e-08!25;CL:0000784!1.06e-07!3;CL:0000775!1.34e-07!3;CL:0000767!1.87e-07!3;CL:0000875!2.08e-07!3;CL:0002396!2.08e-07!3;CL:0000842!6.32e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.14e-46;8!CL:0002393;1.48e-34;6!CL:0002397;1.48e-34;6!CL:0000081;1.96e-33;11!CL:0000766;7.52e-25;69!CL:0000576;1.44e-24;48!CL:0000784;6.42e-19;3!CL:0000775;1.52e-18;3!CL:0000767;3.25e-18;3!CL:0000875;5.49e-18;3!CL:0002396;5.49e-18;3!CL:0000860;5.33e-14;33!CL:0002057;5.33e-14;33!CL:0000771;3.38e-13;2!CL:0000473;1.09e-10;39!CL:0000234;1.09e-10;39!CL:0000763;5.78e-10;100!CL:0000738;1.90e-09;136!CL:0002087;4.42e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.68e-56,72;CL:0002393,6.94e-51,9;CL:0002397,6.94e-51,9;CL:0000094,1.75e-46,8;CL:0000860,1.01e-44,42;CL:0002057,1.01e-44,42;CL:0000738,7.96e-43,136;CL:0000473,1.25e-38,48;CL:0000234,1.25e-38,48;CL:0000763,5.01e-36,108;CL:0000049,5.01e-36,108;CL:0002194,9.79e-34,59;CL:0000576,9.79e-34,59;CL:0000040,9.79e-34,59;CL:0000559,9.79e-34,59;CL:0000037,1.35e-33,168;CL:0000081,1.70e-33,11;CL:0002009,1.65e-32,61;CL:0000988,1.35e-31,177;CL:0000839,9.13e-30,66;CL:0000557,2.89e-29,67;CL:0002032,2.30e-28,161;CL:0000837,2.30e-28,161;CL:0002087,2.99e-23,115;CL:0002031,5.05e-20,120;CL:0000784,6.42e-19,3;CL:0000775,1.23e-18,3;CL:0000767,3.16e-18,3;CL:0000875,4.23e-18,3;CL:0002396,4.23e-18,3;CL:0000771,3.48e-13,2;CL:0000134,8.58e-13,354;CL:0002320,2.01e-12,361;CL:0000219,3.99e-11,386;CL:0000034,6.61e-10,441;CL:0000048,1.56e-09,427;CL:0000723,2.59e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-31;42!CL:0000049;1.06e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.67e-37!102;UBERON:0003061!1.67e-37!102;UBERON:0002193!3.35e-34!112;UBERON:0002371!3.98e-30!80;UBERON:0001474!3.56e-27!86;UBERON:0002405!1.13e-22!115;UBERON:0004765!2.36e-21!101;UBERON:0001434!2.36e-21!101;UBERON:0002384!3.81e-18!375;UBERON:0003081!8.72e-11!216;UBERON:0002204!9.31e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.40e-25,76;UBERON:0001474,3.31e-23,82;UBERON:0002390,6.05e-21,98;UBERON:0003061,6.05e-21,98;UBERON:0004765,8.60e-21,90;UBERON:0002405,5.42e-20,93;UBERON:0002193,1.30e-18,108;UBERON:0001434,2.60e-18,100;UBERON:0002384,6.38e-12,371;UBERON:0002204,2.46e-09,167;UBERON:0003081,6.63e-08,203 | |||
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|short_description=p@chr3:13057835..13057855,- | |||
}} |
Revision as of 21:32, 12 September 2013
Short description: | p@chr3:13057835..13057855, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:13057835..13057855, - |
Coexpression cluster: | C1662_Eosinophils_Dendritic_Neutrophils_Whole_renal_splenic_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.40e-25 | 76 |
bone element | 3.31e-23 | 82 |
hematopoietic system | 6.05e-21 | 98 |
blood island | 6.05e-21 | 98 |
skeletal element | 8.60e-21 | 90 |
immune system | 5.42e-20 | 93 |
hemolymphoid system | 1.30e-18 | 108 |
skeletal system | 2.60e-18 | 100 |
connective tissue | 6.38e-12 | 371 |
musculoskeletal system | 2.46e-09 | 167 |
lateral plate mesoderm | 6.63e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.