FFCP PHASE1:Hg19::chr3:5021026..5021035,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8553|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1046|TSSclassifier=S|UniProt=O14503,Q6IB83|association_with_transcript=-61bp_to_NM_003670,uc003bqf.2,uc011asw.1_5end|description=CAGE_peak_5_at_BHLHE40_5end|id=chr3:5021026..5021035,+|ontology_enrichment_celltype=CL:0002057!4.04e-10!42;CL:0000738!4.34e-10!140;CL:0000766!7.17e-10!76;CL:0000860!4.84e-09!45;CL:0000557!5.80e-09!71;CL:0000839!1.01e-07!70;CL:0002009!2.37e-07!65;CL:0002031!4.76e-07!124|ontology_enrichment_celltype_v019=CL:0000860;2.31e-13;33!CL:0002057;2.31e-13;33!CL:0000473;2.76e-11;39!CL:0000234;2.76e-11;39!CL:0000766;2.27e-07;69|ontology_enrichment_celltype_v019_2=CL:0000738,8.56e-17,136;CL:0000766,8.13e-15,72;CL:0000557,1.31e-13,67;CL:0000473,4.21e-13,48;CL:0000234,4.21e-13,48;CL:0000860,1.44e-12,42;CL:0002057,1.44e-12,42;CL:0002031,2.51e-12,120;CL:0000839,7.83e-12,66;CL:0000037,6.17e-11,168;CL:0002009,1.29e-10,61;CL:0002087,6.26e-10,115;CL:0000988,7.49e-10,177;CL:0002032,1.98e-09,161;CL:0000837,1.98e-09,161;CL:0002194,2.64e-09,59;CL:0000576,2.64e-09,59;CL:0000040,2.64e-09,59;CL:0000559,2.64e-09,59;CL:0000763,8.77e-09,108;CL:0000049,8.77e-09,108|ontology_enrichment_development_v019=CL:0002057;6.62e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.29e-07!80|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.12e-12,76;UBERON:0001474,2.37e-10,82;UBERON:0002405,1.62e-09,93;UBERON:0002390,1.73e-09,98;UBERON:0003061,1.73e-09,98;UBERON:0004765,4.50e-09,90;UBERON:0002193,4.29e-08,108;UBERON:0001434,4.54e-07,100|phase1_expression=0,1.49870366723688,0.281908808191942,0,0.446961094427288,0,0,0,0,1.96587149201207,1.39560233594486,0.218441372130172,1.05506791291381,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,2.21598876669059,2.38091709404843,2.20390187678302,3.54027849164014,1.91914699048606,7.1215416725395,0,1.8072355126695,1.10926203050036,0,0,0.293600439334847,1.10799081706375,2.60707781711184,3.25516306073778,0.223915474239924,0.32389366601898,0,1.30858414901608,1.13362783106643,0.727752183563449,1.85943229524548,3.28934310417461,7.74265927237759,1.7261543539329,7.42866048934392,4.49316236788312,6.20542225325913,16.7826017731795,24.3767675869815,1.69418105588344,1.63743690034707,0,7.95818120164347,4.49300637906531,7.03270838378945,0,3.19141852194611,0.426224750532694,2.03146467040009,1.13477044938228,2.4912889959823,4.52247597462138,7.30076085788282,5.86409880703815,0.605399502633369,1.84138817993782,0.632924774881769,0.633765858935825,0.425208599930087,0.209658645508376,0,0.300353785683013,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0.800791974072025,0,0.661044872784862,0,0,1.17447437874188,1.14681968437569,1.32171328579026,2.24203425192614,0.263384084775077,0.786839080455332,1.17903228824749,2.05601498999509,0.501559486172034,0,0,0,0.668462741311041,0,0,0,0.384273959177026,0.650296737799391,0.822189523018381,0.552700035571697,0,0.14828656316206,0,0,0.113309342697566,0.766440987203842,0,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0.710331756132051,0,2.82249440514625,1.87208137048455,1.73789284659359,0,0,0.383587685530591,0,0,0.724232594804119,1.5905718941022,3.89307896242109,0.378139268656271,0.443458794925128,1.22968699970376,0.523916301990851,0.728590576585084,1.11235332835329,0.324547393654683,0,0.531831842075461,1.43094374583205,2.28797964312051,3.34311751196608,0.596287222100115,0,0,0,0.419499436209906,0.275118041940067,0.626984899610432,0.775250277507987,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.675668882899933,0,0,0.183201743930407,2.63560834872127,15.511210565933,1.3082821564276,0.993943903390637,0,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0.74000264525148,0.311211035399766,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0.516628905878827,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0,0.169560592310488,1.35282597214308,2.72746120590835,1.72082757233402,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0.842923450390509,0,0.992645754591546,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,2.53510069643662,2.94848165003288,1.18157981336281,0,0,1.54411029268673,1.09750285408626,0,4.82539067575828,0.648119116109707,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0.925971025153221,0,0,0,0.246217006087397,3.97807250736704,1.93220510975347,0,2.01578553838631,0.850650583454319,0.179117045405697,0,3.83382679165211,1.97065295158377,9.24508557138873,9.12243708379397,2.16179930125442,11.7405463086533,0.190493682876507,0.763976851116555,0,0,0.411309970813294,0,0,0,1.30788020649984,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1046 | |||
|TSSclassifier=S | |||
|UniProt=O14503,Q6IB83 | |||
|association_with_transcript=-61bp_to_NM_003670,uc003bqf.2,uc011asw.1_5end | |||
|description=CAGE_peak_5_at_BHLHE40_5end | |||
|id=chr3:5021026..5021035,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.04e-10!42;CL:0000738!4.34e-10!140;CL:0000766!7.17e-10!76;CL:0000860!4.84e-09!45;CL:0000557!5.80e-09!71;CL:0000839!1.01e-07!70;CL:0002009!2.37e-07!65;CL:0002031!4.76e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.31e-13;33!CL:0002057;2.31e-13;33!CL:0000473;2.76e-11;39!CL:0000234;2.76e-11;39!CL:0000766;2.27e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.56e-17,136;CL:0000766,8.13e-15,72;CL:0000557,1.31e-13,67;CL:0000473,4.21e-13,48;CL:0000234,4.21e-13,48;CL:0000860,1.44e-12,42;CL:0002057,1.44e-12,42;CL:0002031,2.51e-12,120;CL:0000839,7.83e-12,66;CL:0000037,6.17e-11,168;CL:0002009,1.29e-10,61;CL:0002087,6.26e-10,115;CL:0000988,7.49e-10,177;CL:0002032,1.98e-09,161;CL:0000837,1.98e-09,161;CL:0002194,2.64e-09,59;CL:0000576,2.64e-09,59;CL:0000040,2.64e-09,59;CL:0000559,2.64e-09,59;CL:0000763,8.77e-09,108;CL:0000049,8.77e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.62e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.29e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.12e-12,76;UBERON:0001474,2.37e-10,82;UBERON:0002405,1.62e-09,93;UBERON:0002390,1.73e-09,98;UBERON:0003061,1.73e-09,98;UBERON:0004765,4.50e-09,90;UBERON:0002193,4.29e-08,108;UBERON:0001434,4.54e-07,100 | |||
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| |||
|short_description=p5@BHLHE40 | |||
}} |
Revision as of 00:37, 13 September 2013
Short description: | p5@BHLHE40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_BHLHE40_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_NM_003670, uc003bqf.2, uc011asw.1_5end |
EntrezGene: | BHLHE40 |
HGNC: | 1046 |
UniProt: | O14503Q6IB83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.56e-17 | 136 |
myeloid leukocyte | 8.13e-15 | 72 |
granulocyte monocyte progenitor cell | 1.31e-13 | 67 |
defensive cell | 4.21e-13 | 48 |
phagocyte | 4.21e-13 | 48 |
classical monocyte | 1.44e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-12 | 42 |
hematopoietic lineage restricted progenitor cell | 2.51e-12 | 120 |
myeloid lineage restricted progenitor cell | 7.83e-12 | 66 |
hematopoietic stem cell | 6.17e-11 | 168 |
macrophage dendritic cell progenitor | 1.29e-10 | 61 |
nongranular leukocyte | 6.26e-10 | 115 |
hematopoietic cell | 7.49e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.98e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-09 | 161 |
monopoietic cell | 2.64e-09 | 59 |
monocyte | 2.64e-09 | 59 |
monoblast | 2.64e-09 | 59 |
promonocyte | 2.64e-09 | 59 |
myeloid cell | 8.77e-09 | 108 |
common myeloid progenitor | 8.77e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.12e-12 | 76 |
bone element | 2.37e-10 | 82 |
immune system | 1.62e-09 | 93 |
hematopoietic system | 1.73e-09 | 98 |
blood island | 1.73e-09 | 98 |
skeletal element | 4.50e-09 | 90 |
hemolymphoid system | 4.29e-08 | 108 |
skeletal system | 4.54e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.