FFCP PHASE1:Hg19::chr22:49769867..49769888,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C136|description=CAGE_peak_at_chr22:49769867..49769888,+|id=chr22:49769867..49769888,+|ontology_enrichment_celltype=CL:0002553!2.93e-12!1;CL:0000083!2.63e-11!4|ontology_enrichment_celltype_v019=CL:0002553;2.78e-26;1|ontology_enrichment_celltype_v019_2=CL:0002553,2.78e-26,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:4074!1.26e-21!2;DOID:4905!1.26e-21!2;DOID:3498!1.26e-21!2;DOID:12603!4.06e-12!1;DOID:0050619!5.62e-12!1;DOID:1357!5.62e-12!1;DOID:1793!2.63e-11!4;DOID:170!7.85e-08!6|ontology_enrichment_disease_v019=DOID:12603;5.23e-26;1!DOID:0050619;1.11e-25;1!DOID:1357;1.11e-25;1!DOID:0050615;3.72e-07;16|ontology_enrichment_disease_v019_2=DOID:12603,5.93e-26,1;DOID:0050619,1.26e-25,1;DOID:1357,1.26e-25,1;DOID:0050615,3.78e-07,16|ontology_enrichment_uberon=UBERON:0001282!3.27e-12!1;UBERON:0009842!3.27e-12!1;UBERON:0003704!3.27e-12!1;UBERON:0001171!3.27e-12!1;UBERON:0001172!3.27e-12!1;UBERON:0007195!5.05e-12!1;UBERON:0001764!5.62e-12!1;UBERON:0001825!5.62e-12!1|ontology_enrichment_uberon_v019=UBERON:0001282;3.58e-26;1!UBERON:0009842;3.58e-26;1!UBERON:0003704;3.58e-26;1!UBERON:0001171;3.58e-26;1!UBERON:0001172;3.58e-26;1!UBERON:0007195;1.11e-25;1!UBERON:0001764;1.11e-25;1!UBERON:0001825;1.11e-25;1!UBERON:0001280;1.19e-09;3!UBERON:0004647;1.19e-09;3!UBERON:0002394;1.49e-07;4!UBERON:0003928;1.49e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.58e-26,1;UBERON:0009842,3.58e-26,1;UBERON:0003704,3.58e-26,1;UBERON:0001171,3.58e-26,1;UBERON:0001172,3.58e-26,1;UBERON:0007195,9.79e-26,1;UBERON:0001764,1.26e-25,1;UBERON:0001825,1.26e-25,1;UBERON:0001280,1.19e-09,3;UBERON:0004647,1.19e-09,3;UBERON:0005171,1.19e-09,3|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.9968326438287,0,0.245040215981032,3.53026032738866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399121573143,0,0,0,0,0,2.14926904942244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4826691379241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.008561224282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63069123666336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603851374266694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr22:49769867..49769888,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C136 | |||
|description=CAGE_peak_at_chr22:49769867..49769888,+ | |||
|id=chr22:49769867..49769888,+ | |||
|ontology_enrichment_celltype=CL:0002553!2.93e-12!1;CL:0000083!2.63e-11!4 | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.78e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.78e-26,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4074!1.26e-21!2;DOID:4905!1.26e-21!2;DOID:3498!1.26e-21!2;DOID:12603!4.06e-12!1;DOID:0050619!5.62e-12!1;DOID:1357!5.62e-12!1;DOID:1793!2.63e-11!4;DOID:170!7.85e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:12603;5.23e-26;1!DOID:0050619;1.11e-25;1!DOID:1357;1.11e-25;1!DOID:0050615;3.72e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,5.93e-26,1;DOID:0050619,1.26e-25,1;DOID:1357,1.26e-25,1;DOID:0050615,3.78e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001282!3.27e-12!1;UBERON:0009842!3.27e-12!1;UBERON:0003704!3.27e-12!1;UBERON:0001171!3.27e-12!1;UBERON:0001172!3.27e-12!1;UBERON:0007195!5.05e-12!1;UBERON:0001764!5.62e-12!1;UBERON:0001825!5.62e-12!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;3.58e-26;1!UBERON:0009842;3.58e-26;1!UBERON:0003704;3.58e-26;1!UBERON:0001171;3.58e-26;1!UBERON:0001172;3.58e-26;1!UBERON:0007195;1.11e-25;1!UBERON:0001764;1.11e-25;1!UBERON:0001825;1.11e-25;1!UBERON:0001280;1.19e-09;3!UBERON:0004647;1.19e-09;3!UBERON:0002394;1.49e-07;4!UBERON:0003928;1.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.58e-26,1;UBERON:0009842,3.58e-26,1;UBERON:0003704,3.58e-26,1;UBERON:0001171,3.58e-26,1;UBERON:0001172,3.58e-26,1;UBERON:0007195,9.79e-26,1;UBERON:0001764,1.26e-25,1;UBERON:0001825,1.26e-25,1;UBERON:0001280,1.19e-09,3;UBERON:0004647,1.19e-09,3;UBERON:0005171,1.19e-09,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.9968326438287,0,0.245040215981032,3.53026032738866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399121573143,0,0,0,0,0,2.14926904942244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4826691379241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.008561224282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63069123666336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603851374266694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr22:49769867..49769888,+ | |||
}} |
Revision as of 12:29, 12 September 2013
Short description: | p@chr22:49769867..49769888, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:49769867..49769888, + |
Coexpression cluster: | C136_Wilms_extraskeletal_anaplastic_rhabdomyosarcoma_cholangiocellular_nonsmall_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.78e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 3.58e-26 | 1 |
acinus | 3.58e-26 | 1 |
intrahepatic bile duct | 3.58e-26 | 1 |
portal lobule | 3.58e-26 | 1 |
hepatic acinus | 3.58e-26 | 1 |
stroma of bone marrow | 9.79e-26 | 1 |
maxillary sinus | 1.26e-25 | 1 |
paranasal sinus | 1.26e-25 | 1 |
liver parenchyma | 1.19e-09 | 3 |
liver lobule | 1.19e-09 | 3 |
hepatic duct | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.93e-26 | 1 |
paranasal sinus cancer | 1.26e-25 | 1 |
maxillary sinus cancer | 1.26e-25 | 1 |
respiratory system cancer | 3.78e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.