FFCP PHASE1:Hg19::chr22:43042844..43042890,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1727|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2873|TSSclassifier=S|UniProt=|association_with_transcript=92bp_to_ENST00000407623_5end|coexpression_cluster_id=C20|description=CAGE_peak_25_at_CYB5R3_5end|id=chr22:43042844..43042890,-|ontology_enrichment_celltype=CL:0002580!3.73e-08!3|ontology_enrichment_celltype_v019=CL:0002097;2.57e-08;2|ontology_enrichment_celltype_v019_2=CL:0002097,2.67e-08,2|ontology_enrichment_development_v019=UBERON:0010227;6.93e-16;1!UBERON:0005754;8.63e-16;1!UBERON:0005062;2.22e-15;4!UBERON:0007284;2.22e-15;4!UBERON:0010226;2.56e-15;1!UBERON:0007297;1.50e-08;2!UBERON:0003104;6.59e-08;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.78e-29;2!DOID:178;2.56e-15;1!DOID:326;2.56e-15;1!DOID:3978;2.56e-15;1!DOID:3394;2.56e-15;1!DOID:5844;2.56e-15;1!DOID:1287;2.86e-15;4|ontology_enrichment_disease_v019_2=DOID:114,1.24e-29,2;DOID:178,1.78e-15,1;DOID:326,1.78e-15,1;DOID:3978,1.78e-15,1;DOID:3394,1.78e-15,1;DOID:5844,1.78e-15,1;DOID:1287,2.39e-15,4|ontology_enrichment_uberon=UBERON:0007023!2.48e-17!115;UBERON:0004151!9.12e-09!3;UBERON:0003978!1.17e-08!3;UBERON:0009751!1.17e-08!3;UBERON:0000946!1.17e-08!3;UBERON:0002523!1.17e-08!3;UBERON:0005983!1.17e-08!3;UBERON:0002165!1.17e-08!3;UBERON:0002062!1.17e-08!3;UBERON:0007280!1.17e-08!3;UBERON:0002417!1.41e-08!61;UBERON:0000916!1.41e-08!61;UBERON:0006947!2.61e-08!3;UBERON:0004054!2.61e-08!3;UBERON:0003135!1.32e-07!11;UBERON:0007100!1.72e-07!27;UBERON:0009569!9.92e-07!113|ontology_enrichment_uberon_v019=UBERON:0004151;3.66e-43;3!UBERON:0002081;1.08e-29;2!UBERON:0002133;1.08e-29;2!UBERON:0007100;1.81e-27;25!UBERON:0003978;3.65e-20;3!UBERON:0000946;3.65e-20;3!UBERON:0006947;6.82e-20;3!UBERON:0004054;6.82e-20;3!UBERON:0002079;6.93e-16;1!UBERON:0002135;6.93e-16;1!UBERON:0000998;8.63e-16;1!UBERON:0006868;8.63e-16;1!UBERON:0002134;1.24e-15;1!UBERON:0005208;1.24e-15;1!UBERON:0004145;1.24e-15;1!UBERON:0005946;1.24e-15;1!UBERON:0005965;1.24e-15;1!UBERON:0002078;1.24e-15;1!UBERON:0002084;2.56e-15;1!UBERON:0001000;2.56e-15;1!UBERON:0002082;2.56e-15;1!UBERON:0005352;2.56e-15;1!UBERON:0005904;3.54e-15;4!UBERON:0000948;1.03e-10;22|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.41e-43,3;UBERON:0002081,1.08e-29,2;UBERON:0010227,1.08e-29,2;UBERON:0002133,1.24e-29,2;UBERON:0007100,1.80e-25,27;UBERON:0003978,4.02e-20,3;UBERON:0009751,4.02e-20,3;UBERON:0000946,4.02e-20,3;UBERON:0002523,4.02e-20,3;UBERON:0005983,4.02e-20,3;UBERON:0002165,4.02e-20,3;UBERON:0002062,4.02e-20,3;UBERON:0007280,4.02e-20,3;UBERON:0006947,5.91e-20,3;UBERON:0004054,5.91e-20,3;UBERON:0002079,6.44e-16,1;UBERON:0002135,7.46e-16,1;UBERON:0000998,8.63e-16,1;UBERON:0006868,8.63e-16,1;UBERON:0002134,1.34e-15,1;UBERON:0005208,1.34e-15,1;UBERON:0005946,1.34e-15,1;UBERON:0005965,1.34e-15,1;UBERON:0002078,1.34e-15,1;UBERON:0001000,2.06e-15,1;UBERON:0005352,2.06e-15,1;UBERON:0002084,2.38e-15,1;UBERON:0002082,2.38e-15,1;UBERON:0010226,2.38e-15,1;UBERON:0005904,3.18e-15,4;UBERON:0007023,5.43e-14,114;UBERON:0003103,8.39e-13,68;UBERON:0000948,7.66e-10,24;UBERON:0005498,7.66e-10,24;UBERON:0004140,7.66e-10,24;UBERON:0009881,7.66e-10,24;UBERON:0004141,7.66e-10,24;UBERON:0003084,7.66e-10,24;UBERON:0007005,7.66e-10,24;UBERON:0004139,7.66e-10,24;UBERON:0004291,7.66e-10,24;UBERON:0001009,1.96e-09,112;UBERON:0004797,3.58e-09,7|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.920771839728375,0.841980283299221,2.05022638809122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0.650756789328606,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,6.42349522926185,0.916641696046735,2.15361907373044,1.59743200399193,8.15529491459485,2.4548860318606,0.940568614814168,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.209818352539992,0,0,0,6.4322579373603,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0,0.308801447160972,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,4.23387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985123076837112,0.535928260312357,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p25@CYB5R3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1727 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2873 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=92bp_to_ENST00000407623_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_25_at_CYB5R3_5end | |||
|id=chr22:43042844..43042890,- | |||
|ontology_enrichment_celltype=CL:0002580!3.73e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002097;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,2.67e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;6.93e-16;1!UBERON:0005754;8.63e-16;1!UBERON:0005062;2.22e-15;4!UBERON:0007284;2.22e-15;4!UBERON:0010226;2.56e-15;1!UBERON:0007297;1.50e-08;2!UBERON:0003104;6.59e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.78e-29;2!DOID:178;2.56e-15;1!DOID:326;2.56e-15;1!DOID:3978;2.56e-15;1!DOID:3394;2.56e-15;1!DOID:5844;2.56e-15;1!DOID:1287;2.86e-15;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.24e-29,2;DOID:178,1.78e-15,1;DOID:326,1.78e-15,1;DOID:3978,1.78e-15,1;DOID:3394,1.78e-15,1;DOID:5844,1.78e-15,1;DOID:1287,2.39e-15,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.48e-17!115;UBERON:0004151!9.12e-09!3;UBERON:0003978!1.17e-08!3;UBERON:0009751!1.17e-08!3;UBERON:0000946!1.17e-08!3;UBERON:0002523!1.17e-08!3;UBERON:0005983!1.17e-08!3;UBERON:0002165!1.17e-08!3;UBERON:0002062!1.17e-08!3;UBERON:0007280!1.17e-08!3;UBERON:0002417!1.41e-08!61;UBERON:0000916!1.41e-08!61;UBERON:0006947!2.61e-08!3;UBERON:0004054!2.61e-08!3;UBERON:0003135!1.32e-07!11;UBERON:0007100!1.72e-07!27;UBERON:0009569!9.92e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.66e-43;3!UBERON:0002081;1.08e-29;2!UBERON:0002133;1.08e-29;2!UBERON:0007100;1.81e-27;25!UBERON:0003978;3.65e-20;3!UBERON:0000946;3.65e-20;3!UBERON:0006947;6.82e-20;3!UBERON:0004054;6.82e-20;3!UBERON:0002079;6.93e-16;1!UBERON:0002135;6.93e-16;1!UBERON:0000998;8.63e-16;1!UBERON:0006868;8.63e-16;1!UBERON:0002134;1.24e-15;1!UBERON:0005208;1.24e-15;1!UBERON:0004145;1.24e-15;1!UBERON:0005946;1.24e-15;1!UBERON:0005965;1.24e-15;1!UBERON:0002078;1.24e-15;1!UBERON:0002084;2.56e-15;1!UBERON:0001000;2.56e-15;1!UBERON:0002082;2.56e-15;1!UBERON:0005352;2.56e-15;1!UBERON:0005904;3.54e-15;4!UBERON:0000948;1.03e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.41e-43,3;UBERON:0002081,1.08e-29,2;UBERON:0010227,1.08e-29,2;UBERON:0002133,1.24e-29,2;UBERON:0007100,1.80e-25,27;UBERON:0003978,4.02e-20,3;UBERON:0009751,4.02e-20,3;UBERON:0000946,4.02e-20,3;UBERON:0002523,4.02e-20,3;UBERON:0005983,4.02e-20,3;UBERON:0002165,4.02e-20,3;UBERON:0002062,4.02e-20,3;UBERON:0007280,4.02e-20,3;UBERON:0006947,5.91e-20,3;UBERON:0004054,5.91e-20,3;UBERON:0002079,6.44e-16,1;UBERON:0002135,7.46e-16,1;UBERON:0000998,8.63e-16,1;UBERON:0006868,8.63e-16,1;UBERON:0002134,1.34e-15,1;UBERON:0005208,1.34e-15,1;UBERON:0005946,1.34e-15,1;UBERON:0005965,1.34e-15,1;UBERON:0002078,1.34e-15,1;UBERON:0001000,2.06e-15,1;UBERON:0005352,2.06e-15,1;UBERON:0002084,2.38e-15,1;UBERON:0002082,2.38e-15,1;UBERON:0010226,2.38e-15,1;UBERON:0005904,3.18e-15,4;UBERON:0007023,5.43e-14,114;UBERON:0003103,8.39e-13,68;UBERON:0000948,7.66e-10,24;UBERON:0005498,7.66e-10,24;UBERON:0004140,7.66e-10,24;UBERON:0009881,7.66e-10,24;UBERON:0004141,7.66e-10,24;UBERON:0003084,7.66e-10,24;UBERON:0007005,7.66e-10,24;UBERON:0004139,7.66e-10,24;UBERON:0004291,7.66e-10,24;UBERON:0001009,1.96e-09,112;UBERON:0004797,3.58e-09,7 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.920771839728375,0.841980283299221,2.05022638809122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0.650756789328606,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,6.42349522926185,0.916641696046735,2.15361907373044,1.59743200399193,8.15529491459485,2.4548860318606,0.940568614814168,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.209818352539992,0,0,0,6.4322579373603,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0,0.308801447160972,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,4.23387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985123076837112,0.535928260312357,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p25@CYB5R3 | |||
}} |
Revision as of 12:15, 12 September 2013
Short description: | p25@CYB5R3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_CYB5R3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 92bp_to_ENST00000407623_5end |
EntrezGene: | CYB5R3 |
HGNC: | 2873 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.24e-29 | 2 |
vascular disease | 1.78e-15 | 1 |
ischemia | 1.78e-15 | 1 |
extrinsic cardiomyopathy | 1.78e-15 | 1 |
myocardial ischemia | 1.78e-15 | 1 |
myocardial infarction | 1.78e-15 | 1 |
cardiovascular system disease | 2.39e-15 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.