FFCP PHASE1:Hg19::chr22:26878167..26878178,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=89781|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=15844|TSSclassifier=S|UniProt=Q6P1K3|association_with_transcript=-49bp_to_BC065030_5end|coexpression_cluster_id=C58|description=CAGE_peak_16_at_HPS4_5end|id=chr22:26878167..26878178,-|ontology_enrichment_celltype=CL:0000147!4.06e-22!14;CL:0002274!1.12e-19!5;CL:0000457!1.12e-19!5;CL:0002191!1.12e-19!5;CL:0000097!1.12e-19!5;CL:0000831!1.12e-19!5;CL:0002028!1.12e-19!5;CL:0000148!1.43e-19!10;CL:0000541!1.43e-19!10;CL:0002567!3.97e-13!3;CL:0002619!5.11e-12!3;CL:0000163!8.64e-11!9;CL:0000235!1.59e-09!10;CL:0000149!1.62e-09!4;CL:0000710!3.18e-09!20;CL:0000839!1.06e-08!70;CL:0000557!1.55e-08!71;CL:0000766!9.06e-08!76;CL:0002031!2.79e-07!124;CL:0000325!8.14e-07!39;CL:0000738!9.71e-07!140|ontology_enrichment_celltype_v019=CL:0000148;1.26e-80;10!CL:0000147;1.40e-57;14!CL:0002567;3.40e-50;3!CL:0000710;2.82e-40;20!CL:0000075;8.67e-30;27!CL:0002077;7.39e-21;34!CL:0002566;5.26e-18;1!CL:0000235;7.48e-12;6|ontology_enrichment_celltype_v019_2=CL:0000148,1.34e-80,10;CL:0000541,1.34e-80,10;CL:0000147,1.46e-57,14;CL:0002567,4.38e-50,3;CL:0000710,2.91e-40,20;CL:0000075,8.86e-30,27;CL:0002077,1.34e-23,34;CL:0000333,1.33e-18,41;CL:0002566,5.26e-18,1;CL:0000133,5.19e-13,59;CL:0000235,7.48e-12,6;CL:0000221,1.18e-10,72|ontology_enrichment_development_v019=CL:0000133;2.52e-07;59|ontology_enrichment_disease=DOID:1909!2.55e-09!2|ontology_enrichment_disease_v019=DOID:1909;6.53e-34;2|ontology_enrichment_disease_v019_2=DOID:1909,5.07e-34,2|ontology_enrichment_uberon=UBERON:0001474!6.39e-10!86;UBERON:0002390!1.32e-08!102;UBERON:0003061!1.32e-08!102;UBERON:0002371!2.45e-08!80;UBERON:0002370!2.70e-08!4;UBERON:0005058!2.70e-08!4;UBERON:0009113!2.70e-08!4;UBERON:0003295!2.70e-08!4;UBERON:0005562!2.70e-08!4;UBERON:0002405!4.16e-08!115;UBERON:0004765!7.27e-08!101;UBERON:0001434!7.27e-08!101;UBERON:0000966!1.64e-07!5;UBERON:0005388!1.64e-07!5;UBERON:0001802!1.64e-07!5;UBERON:0002193!1.79e-07!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0.985326475791887,0.616339038092582,0.829312462163088,0.432359860250884,0.75745460055828,4.95283575478919,3.05590740446622,9.37739577680376,3.4214489204541,3.80461723002297,5.40617504119051,12.0047101704843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.640276590135727,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970817393606503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,1.66814029295813,9.42035600698392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788617450012533,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p16@HPS4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=89781 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=15844 | |||
|TSSclassifier=S | |||
|UniProt=Q6P1K3 | |||
|association_with_transcript=-49bp_to_BC065030_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_16_at_HPS4_5end | |||
|id=chr22:26878167..26878178,- | |||
|ontology_enrichment_celltype=CL:0000147!4.06e-22!14;CL:0002274!1.12e-19!5;CL:0000457!1.12e-19!5;CL:0002191!1.12e-19!5;CL:0000097!1.12e-19!5;CL:0000831!1.12e-19!5;CL:0002028!1.12e-19!5;CL:0000148!1.43e-19!10;CL:0000541!1.43e-19!10;CL:0002567!3.97e-13!3;CL:0002619!5.11e-12!3;CL:0000163!8.64e-11!9;CL:0000235!1.59e-09!10;CL:0000149!1.62e-09!4;CL:0000710!3.18e-09!20;CL:0000839!1.06e-08!70;CL:0000557!1.55e-08!71;CL:0000766!9.06e-08!76;CL:0002031!2.79e-07!124;CL:0000325!8.14e-07!39;CL:0000738!9.71e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.26e-80;10!CL:0000147;1.40e-57;14!CL:0002567;3.40e-50;3!CL:0000710;2.82e-40;20!CL:0000075;8.67e-30;27!CL:0002077;7.39e-21;34!CL:0002566;5.26e-18;1!CL:0000235;7.48e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.34e-80,10;CL:0000541,1.34e-80,10;CL:0000147,1.46e-57,14;CL:0002567,4.38e-50,3;CL:0000710,2.91e-40,20;CL:0000075,8.86e-30,27;CL:0002077,1.34e-23,34;CL:0000333,1.33e-18,41;CL:0002566,5.26e-18,1;CL:0000133,5.19e-13,59;CL:0000235,7.48e-12,6;CL:0000221,1.18e-10,72 | |||
|ontology_enrichment_development_v019=CL:0000133;2.52e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!2.55e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;6.53e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.07e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0001474!6.39e-10!86;UBERON:0002390!1.32e-08!102;UBERON:0003061!1.32e-08!102;UBERON:0002371!2.45e-08!80;UBERON:0002370!2.70e-08!4;UBERON:0005058!2.70e-08!4;UBERON:0009113!2.70e-08!4;UBERON:0003295!2.70e-08!4;UBERON:0005562!2.70e-08!4;UBERON:0002405!4.16e-08!115;UBERON:0004765!7.27e-08!101;UBERON:0001434!7.27e-08!101;UBERON:0000966!1.64e-07!5;UBERON:0005388!1.64e-07!5;UBERON:0001802!1.64e-07!5;UBERON:0002193!1.79e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0.985326475791887,0.616339038092582,0.829312462163088,0.432359860250884,0.75745460055828,4.95283575478919,3.05590740446622,9.37739577680376,3.4214489204541,3.80461723002297,5.40617504119051,12.0047101704843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.640276590135727,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970817393606503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,1.66814029295813,9.42035600698392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788617450012533,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p16@HPS4 | |||
}} |
Revision as of 11:17, 12 September 2013
Short description: | p16@HPS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_HPS4_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -49bp_to_BC065030_5end |
EntrezGene: | HPS4 |
HGNC: | 15844 |
UniProt: | Q6P1K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.34e-80 | 10 |
melanoblast | 1.34e-80 | 10 |
pigment cell | 1.46e-57 | 14 |
light melanocyte | 4.38e-50 | 3 |
neurecto-epithelial cell | 2.91e-40 | 20 |
columnar/cuboidal epithelial cell | 8.86e-30 | 27 |
ecto-epithelial cell | 1.34e-23 | 34 |
migratory neural crest cell | 1.33e-18 | 41 |
dark melanocyte | 5.26e-18 | 1 |
neurectodermal cell | 5.19e-13 | 59 |
macrophage | 7.48e-12 | 6 |
ectodermal cell | 1.18e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.07e-34 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.