FFCP PHASE1:Hg19::chr22:24801933..24801943,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C866|description=CAGE_peak_at_chr22:24801933..24801943,+|id=chr22:24801933..24801943,+|ontology_enrichment_celltype=CL:0002057!1.96e-58!42;CL:0000860!2.15e-54!45;CL:0002194!1.36e-37!63;CL:0000576!1.36e-37!63;CL:0000040!1.36e-37!63;CL:0000559!1.36e-37!63;CL:0002009!2.19e-36!65;CL:0000839!1.16e-33!70;CL:0000557!3.64e-33!71;CL:0000766!7.30e-31!76;CL:0002087!1.80e-24!119;CL:0002031!2.16e-23!124;CL:0000738!1.89e-20!140;CL:0000763!2.75e-20!112;CL:0000049!2.75e-20!112;CL:0002032!5.53e-17!165;CL:0000837!5.53e-17!165;CL:0000037!3.43e-16!172;CL:0000566!3.43e-16!172;CL:0000988!3.66e-15!182;CL:0000134!2.35e-07!358;CL:0002320!3.70e-07!365|ontology_enrichment_celltype_v019=CL:0000860;2.30e-38;33!CL:0002057;2.30e-38;33!CL:0000473;8.38e-26;39!CL:0000234;8.38e-26;39!CL:0000576;8.23e-18;48!CL:0000766;2.82e-11;69!CL:0002087;7.99e-11;104!CL:0000763;2.57e-08;100|ontology_enrichment_celltype_v019_2=CL:0000860,3.71e-33,42;CL:0002057,3.71e-33,42;CL:0000473,5.15e-29,48;CL:0000234,5.15e-29,48;CL:0002194,3.31e-23,59;CL:0000576,3.31e-23,59;CL:0000040,3.31e-23,59;CL:0000559,3.31e-23,59;CL:0002009,1.86e-22,61;CL:0000839,8.95e-21,66;CL:0000557,1.81e-20,67;CL:0000766,4.64e-19,72;CL:0002087,3.68e-15,115;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0000763,1.03e-12,108;CL:0000049,1.03e-12,108;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177|ontology_enrichment_development_v019=CL:0002057;2.16e-22;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.16e-29!80;UBERON:0001474!4.73e-27!86;UBERON:0004765!9.91e-23!101;UBERON:0001434!9.91e-23!101;UBERON:0002390!1.74e-22!102;UBERON:0003061!1.74e-22!102;UBERON:0002193!2.75e-20!112;UBERON:0002405!1.06e-19!115;UBERON:0002204!7.52e-13!167;UBERON:0003081!2.22e-09!216;UBERON:0002384!6.87e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.60e-18,76;UBERON:0001474,9.49e-17,82;UBERON:0004765,2.90e-15,90;UBERON:0002405,9.01e-15,93;UBERON:0002390,5.12e-14,98;UBERON:0003061,5.12e-14,98;UBERON:0001434,9.79e-14,100;UBERON:0002193,1.03e-12,108;UBERON:0002204,3.74e-08,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0.822335776043652,0.929119112685311,0.863077176966451,0.256160706529101,0,0.689491361473237,0,4.06279459783025,0,0.272906150057846,0,2.14258724659632,0.320929027076094,0,0,0,0,8.70627715885752,5.6738522469114,4.35975574296902,0,0,0,6.05399502633369,4.41933163185078,2.53169909952708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8814803596864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr22:24801933..24801943,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C866 | |||
|description=CAGE_peak_at_chr22:24801933..24801943,+ | |||
|id=chr22:24801933..24801943,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.96e-58!42;CL:0000860!2.15e-54!45;CL:0002194!1.36e-37!63;CL:0000576!1.36e-37!63;CL:0000040!1.36e-37!63;CL:0000559!1.36e-37!63;CL:0002009!2.19e-36!65;CL:0000839!1.16e-33!70;CL:0000557!3.64e-33!71;CL:0000766!7.30e-31!76;CL:0002087!1.80e-24!119;CL:0002031!2.16e-23!124;CL:0000738!1.89e-20!140;CL:0000763!2.75e-20!112;CL:0000049!2.75e-20!112;CL:0002032!5.53e-17!165;CL:0000837!5.53e-17!165;CL:0000037!3.43e-16!172;CL:0000566!3.43e-16!172;CL:0000988!3.66e-15!182;CL:0000134!2.35e-07!358;CL:0002320!3.70e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.30e-38;33!CL:0002057;2.30e-38;33!CL:0000473;8.38e-26;39!CL:0000234;8.38e-26;39!CL:0000576;8.23e-18;48!CL:0000766;2.82e-11;69!CL:0002087;7.99e-11;104!CL:0000763;2.57e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.71e-33,42;CL:0002057,3.71e-33,42;CL:0000473,5.15e-29,48;CL:0000234,5.15e-29,48;CL:0002194,3.31e-23,59;CL:0000576,3.31e-23,59;CL:0000040,3.31e-23,59;CL:0000559,3.31e-23,59;CL:0002009,1.86e-22,61;CL:0000839,8.95e-21,66;CL:0000557,1.81e-20,67;CL:0000766,4.64e-19,72;CL:0002087,3.68e-15,115;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0000763,1.03e-12,108;CL:0000049,1.03e-12,108;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.16e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.16e-29!80;UBERON:0001474!4.73e-27!86;UBERON:0004765!9.91e-23!101;UBERON:0001434!9.91e-23!101;UBERON:0002390!1.74e-22!102;UBERON:0003061!1.74e-22!102;UBERON:0002193!2.75e-20!112;UBERON:0002405!1.06e-19!115;UBERON:0002204!7.52e-13!167;UBERON:0003081!2.22e-09!216;UBERON:0002384!6.87e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.60e-18,76;UBERON:0001474,9.49e-17,82;UBERON:0004765,2.90e-15,90;UBERON:0002405,9.01e-15,93;UBERON:0002390,5.12e-14,98;UBERON:0003061,5.12e-14,98;UBERON:0001434,9.79e-14,100;UBERON:0002193,1.03e-12,108;UBERON:0002204,3.74e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0.822335776043652,0.929119112685311,0.863077176966451,0.256160706529101,0,0.689491361473237,0,4.06279459783025,0,0.272906150057846,0,2.14258724659632,0.320929027076094,0,0,0,0,8.70627715885752,5.6738522469114,4.35975574296902,0,0,0,6.05399502633369,4.41933163185078,2.53169909952708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8814803596864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr22:24801933..24801943,+ | |||
}} |
Revision as of 11:12, 12 September 2013
Short description: | p@chr22:24801933..24801943, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:24801933..24801943, + |
Coexpression cluster: | C866_hairy_CD14_mycosis_cord_Eosinophils_CD14CD16_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.71e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.71e-33 | 42 |
defensive cell | 5.15e-29 | 48 |
phagocyte | 5.15e-29 | 48 |
monopoietic cell | 3.31e-23 | 59 |
monocyte | 3.31e-23 | 59 |
monoblast | 3.31e-23 | 59 |
promonocyte | 3.31e-23 | 59 |
macrophage dendritic cell progenitor | 1.86e-22 | 61 |
myeloid lineage restricted progenitor cell | 8.95e-21 | 66 |
granulocyte monocyte progenitor cell | 1.81e-20 | 67 |
myeloid leukocyte | 4.64e-19 | 72 |
nongranular leukocyte | 3.68e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.59e-14 | 120 |
leukocyte | 8.37e-13 | 136 |
myeloid cell | 1.03e-12 | 108 |
common myeloid progenitor | 1.03e-12 | 108 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.60e-18 | 76 |
bone element | 9.49e-17 | 82 |
skeletal element | 2.90e-15 | 90 |
immune system | 9.01e-15 | 93 |
hematopoietic system | 5.12e-14 | 98 |
blood island | 5.12e-14 | 98 |
skeletal system | 9.79e-14 | 100 |
hemolymphoid system | 1.03e-12 | 108 |
musculoskeletal system | 3.74e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.