FFCP PHASE1:Hg19::chr22:22599189..22599212,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7441|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12709|TSSclassifier=S|UniProt=F8W8C9,P12018|association_with_transcript=0bp_to_ENST00000302273,NM_007128,uc002zvx.1_5end|coexpression_cluster_id=C183|description=CAGE_peak_1_at_VPREB1_5end|id=chr22:22599189..22599212,+|ontology_enrichment_celltype=CL:0000236!2.38e-12!14;CL:0000945!3.04e-12!24;CL:0000826!3.04e-12!24;CL:0000838!8.65e-08!52;CL:0000817!1.22e-07!3;CL:0000542!1.31e-07!53;CL:0000051!1.31e-07!53|ontology_enrichment_celltype_v019=CL:0000817;4.72e-17;1!CL:0000037;8.86e-17;1!CL:0001024;8.86e-17;1!CL:0002032;1.65e-16;1!CL:0000557;1.65e-16;1!CL:0000945;1.86e-10;24!CL:0000542;1.19e-07;53|ontology_enrichment_celltype_v019_2=CL:0001024,8.86e-17,1;CL:0000945,1.81e-10,24;CL:0000826,1.81e-10,24;CL:0000838,2.39e-07,52;CL:0000542,3.29e-07,53;CL:0000051,3.29e-07,53|ontology_enrichment_development_v019=CL:0000051;1.19e-07;53|ontology_enrichment_disease=DOID:2531!1.08e-13!51;DOID:0060083!1.08e-13!51;DOID:1240!7.34e-11!39;DOID:8692!6.75e-07!31|ontology_enrichment_disease_v019=DOID:1036;1.53e-08;8!DOID:0060058;5.59e-07;10|ontology_enrichment_disease_v019_2=DOID:2531,1.42e-10,51;DOID:0060083,1.42e-10,51;DOID:1036,1.59e-08,8;DOID:0060058,5.43e-07,10|ontology_enrichment_uberon=UBERON:0001042!6.44e-08!10;UBERON:0009145!6.44e-08!10;UBERON:0006562!3.33e-07!11;UBERON:0004177!7.92e-07!7|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88750724410292,1.84820002233648,30.5344456908241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,1.20118796110804,0.574752439954483,0.661044872784862,0,0,0,0,9.25199300053181,0.560508562981536,78.488457262973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0,0,0,0,0,419.102063696572,0.0711418433484141,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0,84.9033006003475,0,0,0.50787533340481,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4167266571899,1.09886179476517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,177.833234977826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0.580120991762195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952257725854961,0.387533459016037,0.434523000071005,0,0,0,0,0.684466602170562,0.134704106029175,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p1@VPREB1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7441 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12709 | |||
|TSSclassifier=S | |||
|UniProt=F8W8C9,P12018 | |||
|association_with_transcript=0bp_to_ENST00000302273,NM_007128,uc002zvx.1_5end | |||
|coexpression_cluster_id=C183 | |||
|description=CAGE_peak_1_at_VPREB1_5end | |||
|id=chr22:22599189..22599212,+ | |||
|ontology_enrichment_celltype=CL:0000236!2.38e-12!14;CL:0000945!3.04e-12!24;CL:0000826!3.04e-12!24;CL:0000838!8.65e-08!52;CL:0000817!1.22e-07!3;CL:0000542!1.31e-07!53;CL:0000051!1.31e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000817;4.72e-17;1!CL:0000037;8.86e-17;1!CL:0001024;8.86e-17;1!CL:0002032;1.65e-16;1!CL:0000557;1.65e-16;1!CL:0000945;1.86e-10;24!CL:0000542;1.19e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,8.86e-17,1;CL:0000945,1.81e-10,24;CL:0000826,1.81e-10,24;CL:0000838,2.39e-07,52;CL:0000542,3.29e-07,53;CL:0000051,3.29e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000051;1.19e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!1.08e-13!51;DOID:0060083!1.08e-13!51;DOID:1240!7.34e-11!39;DOID:8692!6.75e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.53e-08;8!DOID:0060058;5.59e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.42e-10,51;DOID:0060083,1.42e-10,51;DOID:1036,1.59e-08,8;DOID:0060058,5.43e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001042!6.44e-08!10;UBERON:0009145!6.44e-08!10;UBERON:0006562!3.33e-07!11;UBERON:0004177!7.92e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88750724410292,1.84820002233648,30.5344456908241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,1.20118796110804,0.574752439954483,0.661044872784862,0,0,0,0,9.25199300053181,0.560508562981536,78.488457262973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0,0,0,0,0,419.102063696572,0.0711418433484141,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0,84.9033006003475,0,0,0.50787533340481,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4167266571899,1.09886179476517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,177.833234977826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0.580120991762195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952257725854961,0.387533459016037,0.434523000071005,0,0,0,0,0.684466602170562,0.134704106029175,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@VPREB1 | |||
}} |
Revision as of 11:06, 12 September 2013
Short description: | p1@VPREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_VPREB1_5end |
Coexpression cluster: | C183_acute_non_CD34_diffuse_CD133_myeloma_Burkitt |
Association with transcript: | 0bp_to_ENST00000302273, NM_007128, uc002zvx.1_5end |
EntrezGene: | VPREB1 |
HGNC: | 12709 |
UniProt: | F8W8C9P12018 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 8.86e-17 | 1 |
lymphocyte of B lineage | 1.81e-10 | 24 |
pro-B cell | 1.81e-10 | 24 |
lymphoid lineage restricted progenitor cell | 2.39e-07 | 52 |
lymphocyte | 3.29e-07 | 53 |
common lymphoid progenitor | 3.29e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.42e-10 | 51 |
immune system cancer | 1.42e-10 | 51 |
chronic leukemia | 1.59e-08 | 8 |
lymphoma | 5.43e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.