FFCP PHASE1:Hg19::chr21:47424001..47424010,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr21:47424001..47424010,+|id=chr21:47424001..47424010,+|ontology_enrichment_celltype=CL:0000055!2.78e-32!180;CL:0000057!1.03e-21!75;CL:0000680!1.44e-16!57;CL:0000056!1.44e-16!57;CL:0000355!1.44e-16!57;CL:0000187!3.60e-15!54;CL:0000183!4.38e-15!59;CL:0000393!3.90e-13!60;CL:0000211!3.90e-13!60;CL:0000048!2.61e-12!430;CL:0000723!1.55e-11!436;CL:0000034!3.06e-11!444;CL:0000192!4.61e-11!42;CL:0000514!4.61e-11!42;CL:0000359!6.25e-09!32;CL:0002620!7.27e-09!23;CL:0002334!4.82e-08!12|ontology_enrichment_celltype_v019=CL:0002521;8.36e-12;3!CL:0002570;2.52e-10;8!CL:0000499;4.59e-08;28!CL:0002583;5.08e-08;2!CL:0002575;6.81e-08;2!CL:0002195;1.75e-07;2!CL:0002571;1.75e-07;2!CL:1000487;1.75e-07;2|ontology_enrichment_celltype_v019_2=CL:0002521,8.48e-12,3;CL:0000048,1.96e-10,427;CL:0000723,3.98e-10,433;CL:0002570,7.09e-10,8;CL:0000136,7.33e-10,15;CL:0000034,9.95e-10,441;CL:0002320,7.24e-09,361;CL:0000499,3.16e-08,28;CL:0002575,6.87e-08,2;CL:0002583,7.61e-08,2;CL:1000487,1.40e-07,2;CL:0002195,3.63e-07,2;CL:0002571,3.63e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!5.21e-16!83;UBERON:0002329!5.21e-16!83;UBERON:0003077!5.21e-16!83;UBERON:0003059!5.21e-16!83;UBERON:0007282!5.21e-16!83;UBERON:0009618!5.21e-16!83;UBERON:0007285!5.21e-16!83;UBERON:0004290!7.97e-16!70;UBERON:0001134!3.19e-15!61;UBERON:0002036!3.19e-15!61;UBERON:0003082!3.19e-15!61;UBERON:0002385!4.44e-15!63;UBERON:0001015!4.44e-15!63;UBERON:0000383!4.44e-15!63;UBERON:0000486!1.44e-13!82;UBERON:0005256!7.79e-11!143;UBERON:0002100!9.01e-09!216;UBERON:0000475!1.30e-08!365;UBERON:0002199!7.72e-08!45;UBERON:0002416!7.72e-08!45;UBERON:0003102!2.47e-07!95;UBERON:0004573!6.72e-07!33;UBERON:0004571!6.72e-07!33;UBERON:0004872!8.77e-07!84|ontology_enrichment_uberon_v019=UBERON:0002072;4.15e-18;5!UBERON:0001013;1.13e-14;14!UBERON:0002190;8.36e-12;3!UBERON:0003104;4.57e-08;7!UBERON:0009142;4.57e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0002072,6.32e-18,5;UBERON:0001013,2.98e-14,14;UBERON:0002190,8.48e-12,3;UBERON:0002384,2.38e-08,371;UBERON:0002199,2.50e-08,46;UBERON:0002416,2.50e-08,46;UBERON:0003102,6.20e-07,99|phase1_expression=0.363356758541113,1.07050261945492,0.986680828671798,1.0007329835313,0.893922188854576,0,7.59899634504932,2.52687949370732,2.08948502559871,0,0,0,0,1.36142988256051,0.331397375727916,1.34465029290355,0.602694528023977,1.46062018077475,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,1.50401373190767,2.02785126545153,1.5905718941022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.529636723252875,1.43418310374407,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0.756787138224657,0.576175924479999,0.234321431833797,0.312160076830321,0,0.896692083310806,0.23486899728753,0,0.280901613404497,0.816616685019573,0.491337269247072,0.516628905878827,2.37600571456411,2.22540236350701,0,0.718618141816238,0,0,0.277064115484183,0,0.919463387397059,0.600952235626387,0.113432183160021,0.179389635688862,1.70845911054854,2.33125091275518,0.900273288253207,0.515262646192195,0.257640540045629,0.558350568994769,1.85653965465393,0.292311015483596,0.252433774244115,0.276149695926898,1.13152239773168,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,2.57296375277154,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.36669142910475,0.775630294546667,3.57656445851882,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,1.14382394926518,2.71310802695722,0,0.325736184293735,1.06617584622764,0,0.301439377059586,0,0,0,0,0,1.19812427745791,2.29723871668228,0,0.723906533337896,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,0.500170521059677,0,0.415941723061614,0.178428988797162,0.157702415033935,0.234282829985426,1.20378439891088,0,2.0694614258501,0,0,1.47702144595741,1.37060810223918,2.05886054286514,0,0,0,0,1.66435439510497,0,0.992431231275107,0.460385919864187,0.561320188866147,0.512556597022804,0.511707249066704,0.321707842287215,0,1.07946785661859,3.37367278094941,0.657017248110473,1.03850885836724,1.04589340613963,0,0,0,0.574072240823034,0.910455840033585,1.96686622439136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr21:47424001..47424010,+ | |||
|id=chr21:47424001..47424010,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.78e-32!180;CL:0000057!1.03e-21!75;CL:0000680!1.44e-16!57;CL:0000056!1.44e-16!57;CL:0000355!1.44e-16!57;CL:0000187!3.60e-15!54;CL:0000183!4.38e-15!59;CL:0000393!3.90e-13!60;CL:0000211!3.90e-13!60;CL:0000048!2.61e-12!430;CL:0000723!1.55e-11!436;CL:0000034!3.06e-11!444;CL:0000192!4.61e-11!42;CL:0000514!4.61e-11!42;CL:0000359!6.25e-09!32;CL:0002620!7.27e-09!23;CL:0002334!4.82e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002521;8.36e-12;3!CL:0002570;2.52e-10;8!CL:0000499;4.59e-08;28!CL:0002583;5.08e-08;2!CL:0002575;6.81e-08;2!CL:0002195;1.75e-07;2!CL:0002571;1.75e-07;2!CL:1000487;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,8.48e-12,3;CL:0000048,1.96e-10,427;CL:0000723,3.98e-10,433;CL:0002570,7.09e-10,8;CL:0000136,7.33e-10,15;CL:0000034,9.95e-10,441;CL:0002320,7.24e-09,361;CL:0000499,3.16e-08,28;CL:0002575,6.87e-08,2;CL:0002583,7.61e-08,2;CL:1000487,1.40e-07,2;CL:0002195,3.63e-07,2;CL:0002571,3.63e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.21e-16!83;UBERON:0002329!5.21e-16!83;UBERON:0003077!5.21e-16!83;UBERON:0003059!5.21e-16!83;UBERON:0007282!5.21e-16!83;UBERON:0009618!5.21e-16!83;UBERON:0007285!5.21e-16!83;UBERON:0004290!7.97e-16!70;UBERON:0001134!3.19e-15!61;UBERON:0002036!3.19e-15!61;UBERON:0003082!3.19e-15!61;UBERON:0002385!4.44e-15!63;UBERON:0001015!4.44e-15!63;UBERON:0000383!4.44e-15!63;UBERON:0000486!1.44e-13!82;UBERON:0005256!7.79e-11!143;UBERON:0002100!9.01e-09!216;UBERON:0000475!1.30e-08!365;UBERON:0002199!7.72e-08!45;UBERON:0002416!7.72e-08!45;UBERON:0003102!2.47e-07!95;UBERON:0004573!6.72e-07!33;UBERON:0004571!6.72e-07!33;UBERON:0004872!8.77e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;4.15e-18;5!UBERON:0001013;1.13e-14;14!UBERON:0002190;8.36e-12;3!UBERON:0003104;4.57e-08;7!UBERON:0009142;4.57e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,6.32e-18,5;UBERON:0001013,2.98e-14,14;UBERON:0002190,8.48e-12,3;UBERON:0002384,2.38e-08,371;UBERON:0002199,2.50e-08,46;UBERON:0002416,2.50e-08,46;UBERON:0003102,6.20e-07,99 | |||
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| |||
|short_description=p@chr21:47424001..47424010,+ | |||
}} |
Revision as of 10:48, 12 September 2013
Short description: | p@chr21:47424001..47424010, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:47424001..47424010, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 8.48e-12 | 3 |
multi fate stem cell | 1.96e-10 | 427 |
somatic stem cell | 3.98e-10 | 433 |
mesenchymal stem cell of adipose | 7.09e-10 | 8 |
fat cell | 7.33e-10 | 15 |
stem cell | 9.95e-10 | 441 |
connective tissue cell | 7.24e-09 | 361 |
stromal cell | 3.16e-08 | 28 |
central nervous system pericyte | 6.87e-08 | 2 |
subcutaneous preadipocyte | 7.61e-08 | 2 |
smooth muscle cell of prostate | 1.40e-07 | 2 |
hepatic stem cell | 3.63e-07 | 2 |
hepatic mesenchymal stem cell | 3.63e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 6.32e-18 | 5 |
adipose tissue | 2.98e-14 | 14 |
subcutaneous adipose tissue | 8.48e-12 | 3 |
connective tissue | 2.38e-08 | 371 |
integument | 2.50e-08 | 46 |
integumental system | 2.50e-08 | 46 |
surface structure | 6.20e-07 | 99 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.