FFCP PHASE1:Hg19::chr21:45671797..45671832,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C125|description=CAGE_peak_at_chr21:45671797..45671832,-|id=chr21:45671797..45671832,-|ontology_enrichment_celltype=CL:0000515!2.34e-12!4;CL:0000188!6.94e-08!9|ontology_enrichment_celltype_v019=CL:0000319;7.48e-30;1!CL:0000228;2.37e-29;1!CL:0002372;2.37e-29;1!CL:0000159;1.15e-15;2!CL:0000650;2.05e-15;2!CL:1000500;2.05e-15;2!CL:1000618;2.05e-15;2!CL:1001318;2.05e-15;2!CL:0002173;2.05e-15;2!CL:0000056;2.26e-08;4!CL:0000669;2.26e-08;4!CL:0000737;2.26e-08;4|ontology_enrichment_celltype_v019_2=CL:0000319,7.48e-30,1;CL:0000228,2.37e-29,1;CL:0002372,2.37e-29,1;CL:0000159,1.15e-15,2;CL:0000650,2.74e-15,2;CL:1000500,2.74e-15,2;CL:1000618,2.74e-15,2;CL:1001318,2.74e-15,2;CL:0002173,2.74e-15,2;CL:0000737,2.26e-08,4;CL:0000515,2.26e-08,4;CL:0000669,2.61e-08,4|ontology_enrichment_development_v019=UBERON:0008947;4.32e-16;29!CL:0000515;2.26e-08;4|ontology_enrichment_disease=DOID:305!6.63e-10!106|ontology_enrichment_disease_v019=DOID:3030;7.48e-30;1|ontology_enrichment_disease_v019_2=DOID:3030,7.48e-30,1;DOID:305,5.20e-07,106|ontology_enrichment_uberon=UBERON:0001737!4.18e-28!9;UBERON:0001557!5.27e-18!19;UBERON:0000072!3.34e-07!46|ontology_enrichment_uberon_v019=UBERON:0001737;2.49e-50;9!UBERON:0001557;2.49e-50;9!UBERON:0003567;2.05e-15;2!UBERON:0003838;2.05e-15;2!UBERON:0003586;2.05e-15;2!UBERON:0005169;2.05e-15;2!UBERON:0002321;2.05e-15;2!UBERON:0005215;2.05e-15;2!UBERON:0002303;2.05e-15;2!UBERON:0002319;2.05e-15;2!UBERON:0000072;6.12e-12;37!UBERON:0000065;6.14e-12;44!UBERON:0003891;2.26e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.93e-50,9;UBERON:0001557,2.77e-24,19;UBERON:0003567,2.74e-15,2;UBERON:0003838,2.74e-15,2;UBERON:0003586,2.74e-15,2;UBERON:0005169,2.74e-15,2;UBERON:0002321,2.74e-15,2;UBERON:0005215,2.74e-15,2;UBERON:0002303,2.74e-15,2;UBERON:0002319,2.74e-15,2;UBERON:0008947,1.95e-12,38;UBERON:0003258,1.95e-12,38;UBERON:0000072,3.78e-10,47;UBERON:0000065,6.83e-09,54;UBERON:0003891,2.61e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,0.842923450390509,0.964044119533928,1.7647035637183,1.08939722046203,0.71181185733329,1.8876383142423,2.35465758150415,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0.15403067420883,0.784349769176855,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.596586391912706,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.657852148736121,0,0.578742114812744,0,0,0.690860683462397,0,0,0,0,0,0.327609848846413,10.8140079851637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0.258355639344024,0.186224142887574,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0|short_description=p@chr21:45671797..45671832,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_at_chr21:45671797..45671832,- | |||
|id=chr21:45671797..45671832,- | |||
|ontology_enrichment_celltype=CL:0000515!2.34e-12!4;CL:0000188!6.94e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000319;7.48e-30;1!CL:0000228;2.37e-29;1!CL:0002372;2.37e-29;1!CL:0000159;1.15e-15;2!CL:0000650;2.05e-15;2!CL:1000500;2.05e-15;2!CL:1000618;2.05e-15;2!CL:1001318;2.05e-15;2!CL:0002173;2.05e-15;2!CL:0000056;2.26e-08;4!CL:0000669;2.26e-08;4!CL:0000737;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,7.48e-30,1;CL:0000228,2.37e-29,1;CL:0002372,2.37e-29,1;CL:0000159,1.15e-15,2;CL:0000650,2.74e-15,2;CL:1000500,2.74e-15,2;CL:1000618,2.74e-15,2;CL:1001318,2.74e-15,2;CL:0002173,2.74e-15,2;CL:0000737,2.26e-08,4;CL:0000515,2.26e-08,4;CL:0000669,2.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.32e-16;29!CL:0000515;2.26e-08;4 | |||
|ontology_enrichment_disease=DOID:305!6.63e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:3030;7.48e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,7.48e-30,1;DOID:305,5.20e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.18e-28!9;UBERON:0001557!5.27e-18!19;UBERON:0000072!3.34e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.49e-50;9!UBERON:0001557;2.49e-50;9!UBERON:0003567;2.05e-15;2!UBERON:0003838;2.05e-15;2!UBERON:0003586;2.05e-15;2!UBERON:0005169;2.05e-15;2!UBERON:0002321;2.05e-15;2!UBERON:0005215;2.05e-15;2!UBERON:0002303;2.05e-15;2!UBERON:0002319;2.05e-15;2!UBERON:0000072;6.12e-12;37!UBERON:0000065;6.14e-12;44!UBERON:0003891;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.93e-50,9;UBERON:0001557,2.77e-24,19;UBERON:0003567,2.74e-15,2;UBERON:0003838,2.74e-15,2;UBERON:0003586,2.74e-15,2;UBERON:0005169,2.74e-15,2;UBERON:0002321,2.74e-15,2;UBERON:0005215,2.74e-15,2;UBERON:0002303,2.74e-15,2;UBERON:0002319,2.74e-15,2;UBERON:0008947,1.95e-12,38;UBERON:0003258,1.95e-12,38;UBERON:0000072,3.78e-10,47;UBERON:0000065,6.83e-09,54;UBERON:0003891,2.61e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,0.842923450390509,0.964044119533928,1.7647035637183,1.08939722046203,0.71181185733329,1.8876383142423,2.35465758150415,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0.15403067420883,0.784349769176855,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.596586391912706,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.657852148736121,0,0.578742114812744,0,0,0.690860683462397,0,0,0,0,0,0.327609848846413,10.8140079851637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0.258355639344024,0.186224142887574,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:45671797..45671832,- | |||
}} |
Revision as of 10:40, 12 September 2013
Short description: | p@chr21:45671797..45671832, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:45671797..45671832, - |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 7.48e-30 | 1 |
multinucleate cell | 2.37e-29 | 1 |
myotube | 2.37e-29 | 1 |
seromucus secreting cell | 1.15e-15 | 2 |
mesangial cell | 2.74e-15 | 2 |
kidney interstitial cell | 2.74e-15 | 2 |
juxtaglomerular complex cell | 2.74e-15 | 2 |
renal interstitial pericyte | 2.74e-15 | 2 |
extraglomerular mesangial cell | 2.74e-15 | 2 |
striated muscle cell | 2.26e-08 | 4 |
skeletal muscle myoblast | 2.26e-08 | 4 |
pericyte cell | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.93e-50 | 9 |
upper respiratory tract | 2.77e-24 | 19 |
abdomen connective tissue | 2.74e-15 | 2 |
abdominal segment connective tissue | 2.74e-15 | 2 |
trunk connective tissue | 2.74e-15 | 2 |
interstitial tissue | 2.74e-15 | 2 |
extraglomerular mesangium | 2.74e-15 | 2 |
kidney interstitium | 2.74e-15 | 2 |
juxtaglomerular apparatus | 2.74e-15 | 2 |
mesangium | 2.74e-15 | 2 |
respiratory primordium | 1.95e-12 | 38 |
endoderm of foregut | 1.95e-12 | 38 |
segment of respiratory tract | 3.78e-10 | 47 |
respiratory tract | 6.83e-09 | 54 |
stroma | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.48e-30 | 1 |
carcinoma | 5.20e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.