FFCP PHASE1:Hg19::chr21:36421626..36421631,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=861|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10471|TSSclassifier=S|UniProt=|association_with_transcript=9bp_to_ENST00000300305,uc002yuk.3_5end|description=CAGE_peak_31_at_RUNX1_5end|id=chr21:36421626..36421631,-|ontology_enrichment_celltype=CL:0000542!8.93e-14!53;CL:0000051!8.93e-14!53;CL:0000838!1.96e-13!52;CL:0000037!1.58e-11!172;CL:0000566!1.58e-11!172;CL:0000988!4.14e-11!182;CL:0002032!8.44e-10!165;CL:0000837!8.44e-10!165;CL:0000791!1.76e-09!18;CL:0000789!1.76e-09!18;CL:0002420!1.76e-09!18;CL:0002419!1.76e-09!18;CL:0000790!1.76e-09!18;CL:0000084!8.80e-09!25;CL:0000827!8.80e-09!25;CL:0002087!1.27e-08!119;CL:0002031!1.41e-08!124;CL:0000738!4.76e-08!140|ontology_enrichment_celltype_v019=CL:0000791;1.41e-15;18!CL:0000789;1.41e-15;18!CL:0002419;1.41e-15;18!CL:0000084;4.90e-15;25!CL:0000624;9.89e-13;6!CL:0000817;2.65e-09;1!CL:0000097;2.76e-07;5!CL:0000625;4.75e-07;11!CL:0000542;4.96e-07;53|ontology_enrichment_celltype_v019_2=CL:0000791,9.97e-16,18;CL:0000789,9.97e-16,18;CL:0002420,9.97e-16,18;CL:0002419,9.97e-16,18;CL:0000790,9.97e-16,18;CL:0000084,3.75e-15,25;CL:0000827,3.75e-15,25;CL:0000624,5.66e-13,6;CL:0000838,2.81e-11,52;CL:0000542,4.86e-11,53;CL:0000051,4.86e-11,53;CL:0000738,1.42e-07,136;CL:0000097,3.14e-07,5;CL:0002028,3.14e-07,5;CL:0000625,4.81e-07,11|ontology_enrichment_development_v019=CL:0000790;1.41e-15;18!UBERON:0001045;2.65e-09;1!CL:0000051;4.96e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002370;9.02e-18;2!UBERON:0005058;9.02e-18;2!UBERON:0009113;9.02e-18;2!UBERON:0001154;2.65e-09;1!UBERON:0001153;2.65e-09;1!UBERON:0007195;2.65e-09;1!UBERON:0009854;2.65e-09;1!UBERON:0004177;1.24e-07;5!UBERON:0005057;1.24e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.17e-09,4;UBERON:0005058,2.17e-09,4;UBERON:0009113,2.17e-09,4;UBERON:0003295,2.17e-09,4;UBERON:0005562,2.17e-09,4;UBERON:0007195,3.83e-09,1;UBERON:0001154,4.15e-09,1;UBERON:0001153,4.15e-09,1;UBERON:0001045,4.15e-09,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0.697204805222715,0.568676929949686,0,0.553995408531877,0.401088894940283,0.651032612147555,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.22465726229299,0,0.48217676009124,0,0,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,0.569212969109448,0.587237189370939,1.52909291250092,0,0.560508562981536,0.263384084775077,1.96709770113833,0.786021525498329,1.43921049299656,1.33749196312542,2.28145586643513,1.89379122293893,0,0.557052284425868,0.294605907474837,0,0,0.384273959177026,0.780356085359269,0.493313713811028,0.552700035571697,0.869409257205157,1.63115219478266,0.802622484269139,1.04535523804977,0.226618685395132,0.383220493601921,1.37450978193052,2.02415753615602,1.27426165729639,0,0.950452044448374,0.903450714466637,0.76791966692651,1.24930726552346,0.947109008176067,0,0.403213486449465,0,1.30341963494519,0,0,0,0,0.50133791063589,0,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0,0,0,0.649094787309367,0.174129737299267,0.531831842075461,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0.491337269247072,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0,0.337552664482532,0,0.504867548488229,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0.343135620597051,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0.93733833986777,0,0.425325291727159,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.621984346622316,1.44119953416961,1.00993946741104,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0.788123040807709,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0.157702415033935,0.585707074963566,0.601892199455438,0,0,0,0.368738337083406,0.173767228936166,0,0,0.620304078368662,1.07857100409308,0.640365346820666,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0.447749509444357,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10471 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENST00000300305,uc002yuk.3_5end | |||
|description=CAGE_peak_31_at_RUNX1_5end | |||
|id=chr21:36421626..36421631,- | |||
|ontology_enrichment_celltype=CL:0000542!8.93e-14!53;CL:0000051!8.93e-14!53;CL:0000838!1.96e-13!52;CL:0000037!1.58e-11!172;CL:0000566!1.58e-11!172;CL:0000988!4.14e-11!182;CL:0002032!8.44e-10!165;CL:0000837!8.44e-10!165;CL:0000791!1.76e-09!18;CL:0000789!1.76e-09!18;CL:0002420!1.76e-09!18;CL:0002419!1.76e-09!18;CL:0000790!1.76e-09!18;CL:0000084!8.80e-09!25;CL:0000827!8.80e-09!25;CL:0002087!1.27e-08!119;CL:0002031!1.41e-08!124;CL:0000738!4.76e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.41e-15;18!CL:0000789;1.41e-15;18!CL:0002419;1.41e-15;18!CL:0000084;4.90e-15;25!CL:0000624;9.89e-13;6!CL:0000817;2.65e-09;1!CL:0000097;2.76e-07;5!CL:0000625;4.75e-07;11!CL:0000542;4.96e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.97e-16,18;CL:0000789,9.97e-16,18;CL:0002420,9.97e-16,18;CL:0002419,9.97e-16,18;CL:0000790,9.97e-16,18;CL:0000084,3.75e-15,25;CL:0000827,3.75e-15,25;CL:0000624,5.66e-13,6;CL:0000838,2.81e-11,52;CL:0000542,4.86e-11,53;CL:0000051,4.86e-11,53;CL:0000738,1.42e-07,136;CL:0000097,3.14e-07,5;CL:0002028,3.14e-07,5;CL:0000625,4.81e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.41e-15;18!UBERON:0001045;2.65e-09;1!CL:0000051;4.96e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.02e-18;2!UBERON:0005058;9.02e-18;2!UBERON:0009113;9.02e-18;2!UBERON:0001154;2.65e-09;1!UBERON:0001153;2.65e-09;1!UBERON:0007195;2.65e-09;1!UBERON:0009854;2.65e-09;1!UBERON:0004177;1.24e-07;5!UBERON:0005057;1.24e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.17e-09,4;UBERON:0005058,2.17e-09,4;UBERON:0009113,2.17e-09,4;UBERON:0003295,2.17e-09,4;UBERON:0005562,2.17e-09,4;UBERON:0007195,3.83e-09,1;UBERON:0001154,4.15e-09,1;UBERON:0001153,4.15e-09,1;UBERON:0001045,4.15e-09,1 | |||
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| |||
|short_description=p31@RUNX1 | |||
}} |
Revision as of 10:15, 12 September 2013
Short description: | p31@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_31_at_RUNX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000300305, uc002yuk.3_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.97e-16 | 18 |
alpha-beta T cell | 9.97e-16 | 18 |
immature T cell | 9.97e-16 | 18 |
mature T cell | 9.97e-16 | 18 |
immature alpha-beta T cell | 9.97e-16 | 18 |
T cell | 3.75e-15 | 25 |
pro-T cell | 3.75e-15 | 25 |
CD4-positive, alpha-beta T cell | 5.66e-13 | 6 |
lymphoid lineage restricted progenitor cell | 2.81e-11 | 52 |
lymphocyte | 4.86e-11 | 53 |
common lymphoid progenitor | 4.86e-11 | 53 |
leukocyte | 1.42e-07 | 136 |
mast cell | 3.14e-07 | 5 |
basophil mast progenitor cell | 3.14e-07 | 5 |
CD8-positive, alpha-beta T cell | 4.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.17e-09 | 4 |
hemolymphoid system gland | 2.17e-09 | 4 |
thymic region | 2.17e-09 | 4 |
pharyngeal gland | 2.17e-09 | 4 |
thymus primordium | 2.17e-09 | 4 |
stroma of bone marrow | 3.83e-09 | 1 |
vermiform appendix | 4.15e-09 | 1 |
caecum | 4.15e-09 | 1 |
midgut | 4.15e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.