FFCP PHASE1:Hg19::chr21:34775698..34775771,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3460 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5440 | |||
|TSSclassifier=S | |||
|UniProt=E7EUY1,B5MCZ0,F8WF11,F8WE34 | |||
|association_with_transcript=0bp_to_ENST00000381995,ENST00000405436,ENST00000439213,ENST00000545369_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_IFNGR2_5end | |||
|id=chr21:34775698..34775771,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.02e-27!76;CL:0002057!1.27e-25!42;CL:0002194!5.86e-25!63;CL:0000576!5.86e-25!63;CL:0000040!5.86e-25!63;CL:0000559!5.86e-25!63;CL:0002009!8.64e-25!65;CL:0000557!7.01e-24!71;CL:0000839!6.48e-22!70;CL:0000860!1.36e-21!45;CL:0000763!2.45e-13!112;CL:0000049!2.45e-13!112;CL:0002371!2.29e-09!591;CL:0000738!9.93e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.02e-19;33!CL:0002057;9.02e-19;33!CL:0000473;1.20e-18;39!CL:0000234;1.20e-18;39!CL:0000576;1.85e-15;48!CL:0000766;6.38e-14;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.23e-30,72;CL:0000473,3.68e-29,48;CL:0000234,3.68e-29,48;CL:0002194,8.12e-28,59;CL:0000576,8.12e-28,59;CL:0000040,8.12e-28,59;CL:0000559,8.12e-28,59;CL:0002009,1.47e-27,61;CL:0000557,2.21e-26,67;CL:0000860,1.27e-25,42;CL:0002057,1.27e-25,42;CL:0000839,2.79e-24,66;CL:0000763,1.79e-14,108;CL:0000049,1.79e-14,108;CL:0000738,2.18e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!7.83e-22!216;UBERON:0002193!7.88e-21!112;UBERON:0002371!1.41e-20!80;UBERON:0002390!7.55e-20!102;UBERON:0003061!7.55e-20!102;UBERON:0001474!1.06e-18!86;UBERON:0004765!7.11e-17!101;UBERON:0001434!7.11e-17!101;UBERON:0002405!4.06e-16!115;UBERON:0002204!1.07e-15!167;UBERON:0000926!1.17e-10!448;UBERON:0004120!1.17e-10!448;UBERON:0006603!1.17e-10!448;UBERON:0002050!3.27e-08!605;UBERON:0005423!3.27e-08!605;UBERON:0000923!5.47e-08!604;UBERON:0005291!5.47e-08!604;UBERON:0006598!5.47e-08!604;UBERON:0002532!5.47e-08!604;UBERON:0000480!1.22e-07!626;UBERON:0000922!1.24e-07!612;UBERON:0000467!2.21e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.32e-22,76;UBERON:0002193,2.08e-22,108;UBERON:0003081,1.08e-21,203;UBERON:0002390,1.75e-21,98;UBERON:0003061,1.75e-21,98;UBERON:0004765,1.38e-20,90;UBERON:0001474,1.75e-20,82;UBERON:0002405,5.22e-20,93;UBERON:0001434,7.57e-19,100;UBERON:0002204,4.42e-17,167;UBERON:0000926,1.95e-14,315;UBERON:0004120,1.95e-14,315;UBERON:0006603,1.95e-14,315;UBERON:0000922,1.08e-07,592;UBERON:0005423,3.27e-07,581 | |||
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| |||
|short_description=p1@IFNGR2 | |||
}} |
Revision as of 10:09, 12 September 2013
Short description: | p1@IFNGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IFNGR2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000381995, ENST00000405436, ENST00000439213, ENST00000545369_5end |
EntrezGene: | IFNGR2 |
HGNC: | 5440 |
UniProt: | E7EUY1B5MCZ0F8WF11F8WE34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.23e-30 | 72 |
defensive cell | 3.68e-29 | 48 |
phagocyte | 3.68e-29 | 48 |
monopoietic cell | 8.12e-28 | 59 |
monocyte | 8.12e-28 | 59 |
monoblast | 8.12e-28 | 59 |
promonocyte | 8.12e-28 | 59 |
macrophage dendritic cell progenitor | 1.47e-27 | 61 |
granulocyte monocyte progenitor cell | 2.21e-26 | 67 |
classical monocyte | 1.27e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-25 | 42 |
myeloid lineage restricted progenitor cell | 2.79e-24 | 66 |
myeloid cell | 1.79e-14 | 108 |
common myeloid progenitor | 1.79e-14 | 108 |
leukocyte | 2.18e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.32e-22 | 76 |
hemolymphoid system | 2.08e-22 | 108 |
lateral plate mesoderm | 1.08e-21 | 203 |
hematopoietic system | 1.75e-21 | 98 |
blood island | 1.75e-21 | 98 |
skeletal element | 1.38e-20 | 90 |
bone element | 1.75e-20 | 82 |
immune system | 5.22e-20 | 93 |
skeletal system | 7.57e-19 | 100 |
musculoskeletal system | 4.42e-17 | 167 |
mesoderm | 1.95e-14 | 315 |
mesoderm-derived structure | 1.95e-14 | 315 |
presumptive mesoderm | 1.95e-14 | 315 |
embryo | 1.08e-07 | 592 |
developing anatomical structure | 3.27e-07 | 581 |
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