FFCP PHASE1:Hg19::chr20:46130672..46130686,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8202 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7670 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000371997,uc010ghu.1_5end | |||
|coexpression_cluster_id=C4046 | |||
|description=CAGE_peak_2_at_NCOA3_5end | |||
|id=chr20:46130672..46130686,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.02e-38!140;CL:0002087!1.51e-33!119;CL:0002031!3.59e-31!124;CL:0000037!7.91e-26!172;CL:0000566!7.91e-26!172;CL:0002032!9.53e-24!165;CL:0000837!9.53e-24!165;CL:0002057!1.19e-23!42;CL:0000860!6.88e-22!45;CL:0000766!4.48e-21!76;CL:0000988!6.54e-21!182;CL:0000557!6.12e-20!71;CL:0002194!1.39e-19!63;CL:0000576!1.39e-19!63;CL:0000040!1.39e-19!63;CL:0000559!1.39e-19!63;CL:0002009!2.25e-19!65;CL:0000839!8.71e-19!70;CL:0000542!1.60e-12!53;CL:0000051!1.60e-12!53;CL:0000838!2.67e-12!52;CL:0000945!3.34e-12!24;CL:0000826!3.34e-12!24;CL:0000763!9.12e-12!112;CL:0000049!9.12e-12!112;CL:0000236!2.05e-09!14;CL:0000134!4.77e-08!358;CL:0002320!5.43e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.26e-18;33!CL:0002057;3.26e-18;33!CL:0000473;1.79e-14;39!CL:0000234;1.79e-14;39!CL:0000576;3.34e-14;48!CL:0000945;1.93e-12;24!CL:0002087;1.84e-11;104!CL:0000766;2.03e-10;69!CL:0000236;2.89e-09;13!CL:0000738;4.46e-09;136!CL:0000542;4.84e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.90e-39,136;CL:0002087,2.07e-34,115;CL:0002031,6.30e-32,120;CL:0000037,3.64e-26,168;CL:0002032,4.51e-24,161;CL:0000837,4.51e-24,161;CL:0000860,1.14e-23,42;CL:0002057,1.14e-23,42;CL:0000473,4.85e-22,48;CL:0000234,4.85e-22,48;CL:0000766,5.82e-22,72;CL:0000988,1.02e-21,177;CL:0000557,7.67e-21,67;CL:0002194,1.34e-20,59;CL:0000576,1.34e-20,59;CL:0000040,1.34e-20,59;CL:0000559,1.34e-20,59;CL:0002009,2.42e-20,61;CL:0000839,1.21e-19,66;CL:0000542,1.56e-12,53;CL:0000051,1.56e-12,53;CL:0000838,2.60e-12,52;CL:0000945,3.27e-12,24;CL:0000826,3.27e-12,24;CL:0000763,5.34e-12,108;CL:0000049,5.34e-12,108;CL:0000236,2.02e-09,14;CL:0000134,1.56e-08,354;CL:0002320,2.02e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.74e-17;42!CL:0000051;4.84e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.46e-20!102;UBERON:0003061!7.46e-20!102;UBERON:0002193!1.08e-17!112;UBERON:0001474!6.56e-17!86;UBERON:0002371!2.43e-16!80;UBERON:0002405!5.08e-14!115;UBERON:0004765!4.11e-12!101;UBERON:0001434!4.11e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.33e-20,98;UBERON:0003061,2.33e-20,98;UBERON:0002193,4.07e-18,108;UBERON:0001474,1.85e-17,82;UBERON:0002371,6.43e-17,76;UBERON:0002405,2.18e-16,93;UBERON:0004765,9.29e-15,90;UBERON:0001434,1.19e-11,100;UBERON:0002384,5.12e-07,371 | |||
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| |||
|short_description=p2@NCOA3 | |||
}} |
Revision as of 08:52, 12 September 2013
Short description: | p2@NCOA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NCOA3_5end |
Coexpression cluster: | C4046_breast_Mast_MCF7_lymphoma_CD19_migratory_lung |
Association with transcript: | 0bp_to_ENST00000371997, uc010ghu.1_5end |
EntrezGene: | NCOA3 |
HGNC: | 7670 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.90e-39 | 136 |
nongranular leukocyte | 2.07e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 6.30e-32 | 120 |
hematopoietic stem cell | 3.64e-26 | 168 |
hematopoietic oligopotent progenitor cell | 4.51e-24 | 161 |
hematopoietic multipotent progenitor cell | 4.51e-24 | 161 |
classical monocyte | 1.14e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-23 | 42 |
defensive cell | 4.85e-22 | 48 |
phagocyte | 4.85e-22 | 48 |
myeloid leukocyte | 5.82e-22 | 72 |
hematopoietic cell | 1.02e-21 | 177 |
granulocyte monocyte progenitor cell | 7.67e-21 | 67 |
monopoietic cell | 1.34e-20 | 59 |
monocyte | 1.34e-20 | 59 |
monoblast | 1.34e-20 | 59 |
promonocyte | 1.34e-20 | 59 |
macrophage dendritic cell progenitor | 2.42e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.21e-19 | 66 |
lymphocyte | 1.56e-12 | 53 |
common lymphoid progenitor | 1.56e-12 | 53 |
lymphoid lineage restricted progenitor cell | 2.60e-12 | 52 |
lymphocyte of B lineage | 3.27e-12 | 24 |
pro-B cell | 3.27e-12 | 24 |
myeloid cell | 5.34e-12 | 108 |
common myeloid progenitor | 5.34e-12 | 108 |
B cell | 2.02e-09 | 14 |
mesenchymal cell | 1.56e-08 | 354 |
connective tissue cell | 2.02e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.33e-20 | 98 |
blood island | 2.33e-20 | 98 |
hemolymphoid system | 4.07e-18 | 108 |
bone element | 1.85e-17 | 82 |
bone marrow | 6.43e-17 | 76 |
immune system | 2.18e-16 | 93 |
skeletal element | 9.29e-15 | 90 |
skeletal system | 1.19e-11 | 100 |
connective tissue | 5.12e-07 | 371 |
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