FFCP PHASE1:Hg19::chr20:44641061..44641077,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C71|description=CAGE_peak_at_chr20:44641061..44641077,+|id=chr20:44641061..44641077,+|ontology_enrichment_celltype=CL:0000235!8.55e-23!10;CL:0002009!2.00e-11!65;CL:0000766!2.91e-11!76;CL:0000557!2.80e-10!71;CL:0002194!7.13e-10!63;CL:0000576!7.13e-10!63;CL:0000040!7.13e-10!63;CL:0000559!7.13e-10!63;CL:0000775!1.67e-09!3;CL:0000763!1.99e-09!112;CL:0000049!1.99e-09!112;CL:0000839!1.06e-08!70;CL:0000738!4.53e-08!140;CL:0002336!3.01e-07!1;CL:0002261!3.01e-07!1;CL:0002170!3.01e-07!1;CL:0000244!4.63e-07!4;CL:0000731!4.63e-07!4;CL:0000990!9.76e-07!8|ontology_enrichment_celltype_v019=CL:0000235;1.56e-118;6!CL:0000775;3.80e-27;3!CL:0000473;9.09e-16;39!CL:0000234;9.09e-16;39!CL:0000840;5.17e-14;5!CL:0001014;4.09e-11;2!CL:0001016;4.09e-11;2!CL:0000094;7.86e-11;8!CL:0000990;1.15e-09;8!CL:0000766;2.10e-09;69!CL:0000081;3.97e-08;11!CL:0000451;4.49e-08;10|ontology_enrichment_celltype_v019_2=CL:0000235,1.73e-118,6;CL:0000775,3.11e-27,3;CL:0000766,1.28e-21,72;CL:0002009,3.88e-20,61;CL:0000557,2.44e-18,67;CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0002194,4.85e-16,59;CL:0000576,4.85e-16,59;CL:0000040,4.85e-16,59;CL:0000559,4.85e-16,59;CL:0000473,6.36e-15,48;CL:0000234,6.36e-15,48;CL:0000839,2.41e-14,66;CL:0000738,4.83e-14,136;CL:0000840,5.53e-14,5;CL:0001029,5.53e-14,5;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0001014,4.52e-11,2;CL:0001016,4.52e-11,2;CL:0000094,7.30e-11,8;CL:0000988,1.07e-10,177;CL:0002031,3.71e-10,120;CL:0000990,1.20e-09,8;CL:0002087,3.59e-08,115;CL:0000081,3.76e-08,11;CL:0000451,4.66e-08,10|ontology_enrichment_development_v019=CL:0000049;1.08e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.14e-11!112;UBERON:0002390!1.70e-10!102;UBERON:0003061!1.70e-10!102;UBERON:0002405!2.31e-10!115;UBERON:0002371!7.00e-09!80;UBERON:0001474!4.12e-08!86;UBERON:0000029!1.25e-07!1;UBERON:0001831!1.61e-07!1;UBERON:0001567!1.61e-07!1;UBERON:0008801!1.61e-07!1;UBERON:0001282!4.34e-07!1;UBERON:0009842!4.34e-07!1;UBERON:0003704!4.34e-07!1;UBERON:0001171!4.34e-07!1;UBERON:0001172!4.34e-07!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.66e-16,76;UBERON:0001474,5.67e-15,82;UBERON:0004765,1.25e-13,90;UBERON:0002405,3.50e-13,93;UBERON:0002390,1.69e-12,98;UBERON:0003061,1.69e-12,98;UBERON:0001434,3.03e-12,100;UBERON:0002193,2.56e-11,108;UBERON:0002204,3.46e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,5.17055712783534,7.72214074959484,9.66102554876734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,7.03159928004977,37.9501091069457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9832291840805,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,1.1248694577575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p@chr20:44641061..44641077,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr20:44641061..44641077,+ | |||
|id=chr20:44641061..44641077,+ | |||
|ontology_enrichment_celltype=CL:0000235!8.55e-23!10;CL:0002009!2.00e-11!65;CL:0000766!2.91e-11!76;CL:0000557!2.80e-10!71;CL:0002194!7.13e-10!63;CL:0000576!7.13e-10!63;CL:0000040!7.13e-10!63;CL:0000559!7.13e-10!63;CL:0000775!1.67e-09!3;CL:0000763!1.99e-09!112;CL:0000049!1.99e-09!112;CL:0000839!1.06e-08!70;CL:0000738!4.53e-08!140;CL:0002336!3.01e-07!1;CL:0002261!3.01e-07!1;CL:0002170!3.01e-07!1;CL:0000244!4.63e-07!4;CL:0000731!4.63e-07!4;CL:0000990!9.76e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.56e-118;6!CL:0000775;3.80e-27;3!CL:0000473;9.09e-16;39!CL:0000234;9.09e-16;39!CL:0000840;5.17e-14;5!CL:0001014;4.09e-11;2!CL:0001016;4.09e-11;2!CL:0000094;7.86e-11;8!CL:0000990;1.15e-09;8!CL:0000766;2.10e-09;69!CL:0000081;3.97e-08;11!CL:0000451;4.49e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.73e-118,6;CL:0000775,3.11e-27,3;CL:0000766,1.28e-21,72;CL:0002009,3.88e-20,61;CL:0000557,2.44e-18,67;CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0002194,4.85e-16,59;CL:0000576,4.85e-16,59;CL:0000040,4.85e-16,59;CL:0000559,4.85e-16,59;CL:0000473,6.36e-15,48;CL:0000234,6.36e-15,48;CL:0000839,2.41e-14,66;CL:0000738,4.83e-14,136;CL:0000840,5.53e-14,5;CL:0001029,5.53e-14,5;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0001014,4.52e-11,2;CL:0001016,4.52e-11,2;CL:0000094,7.30e-11,8;CL:0000988,1.07e-10,177;CL:0002031,3.71e-10,120;CL:0000990,1.20e-09,8;CL:0002087,3.59e-08,115;CL:0000081,3.76e-08,11;CL:0000451,4.66e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000049;1.08e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.14e-11!112;UBERON:0002390!1.70e-10!102;UBERON:0003061!1.70e-10!102;UBERON:0002405!2.31e-10!115;UBERON:0002371!7.00e-09!80;UBERON:0001474!4.12e-08!86;UBERON:0000029!1.25e-07!1;UBERON:0001831!1.61e-07!1;UBERON:0001567!1.61e-07!1;UBERON:0008801!1.61e-07!1;UBERON:0001282!4.34e-07!1;UBERON:0009842!4.34e-07!1;UBERON:0003704!4.34e-07!1;UBERON:0001171!4.34e-07!1;UBERON:0001172!4.34e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.66e-16,76;UBERON:0001474,5.67e-15,82;UBERON:0004765,1.25e-13,90;UBERON:0002405,3.50e-13,93;UBERON:0002390,1.69e-12,98;UBERON:0003061,1.69e-12,98;UBERON:0001434,3.03e-12,100;UBERON:0002193,2.56e-11,108;UBERON:0002204,3.46e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,5.17055712783534,7.72214074959484,9.66102554876734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,7.03159928004977,37.9501091069457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9832291840805,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,1.1248694577575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr20:44641061..44641077,+ | |||
}} |
Revision as of 08:48, 12 September 2013
Short description: | p@chr20:44641061..44641077, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:44641061..44641077, + |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.73e-118 | 6 |
neutrophil | 3.11e-27 | 3 |
myeloid leukocyte | 1.28e-21 | 72 |
macrophage dendritic cell progenitor | 3.88e-20 | 61 |
granulocyte monocyte progenitor cell | 2.44e-18 | 67 |
myeloid cell | 9.38e-18 | 108 |
common myeloid progenitor | 9.38e-18 | 108 |
monopoietic cell | 4.85e-16 | 59 |
monocyte | 4.85e-16 | 59 |
monoblast | 4.85e-16 | 59 |
promonocyte | 4.85e-16 | 59 |
defensive cell | 6.36e-15 | 48 |
phagocyte | 6.36e-15 | 48 |
myeloid lineage restricted progenitor cell | 2.41e-14 | 66 |
leukocyte | 4.83e-14 | 136 |
immature conventional dendritic cell | 5.53e-14 | 5 |
common dendritic progenitor | 5.53e-14 | 5 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
CD1a-positive Langerhans cell | 4.52e-11 | 2 |
immature CD1a-positive Langerhans cell | 4.52e-11 | 2 |
granulocyte | 7.30e-11 | 8 |
hematopoietic cell | 1.07e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 3.71e-10 | 120 |
conventional dendritic cell | 1.20e-09 | 8 |
nongranular leukocyte | 3.59e-08 | 115 |
blood cell | 3.76e-08 | 11 |
dendritic cell | 4.66e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.66e-16 | 76 |
bone element | 5.67e-15 | 82 |
skeletal element | 1.25e-13 | 90 |
immune system | 3.50e-13 | 93 |
hematopoietic system | 1.69e-12 | 98 |
blood island | 1.69e-12 | 98 |
skeletal system | 3.03e-12 | 100 |
hemolymphoid system | 2.56e-11 | 108 |
musculoskeletal system | 3.46e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.