FFCP PHASE1:Hg19::chr20:44638500..44638512,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C71|description=CAGE_peak_at_chr20:44638500..44638512,+|id=chr20:44638500..44638512,+|ontology_enrichment_celltype=CL:0000235!6.03e-25!10;CL:0002009!5.52e-15!65;CL:0000766!1.15e-14!76;CL:0000557!1.58e-13!71;CL:0002194!3.80e-13!63;CL:0000576!3.80e-13!63;CL:0000040!3.80e-13!63;CL:0000559!3.80e-13!63;CL:0000763!3.27e-12!112;CL:0000049!3.27e-12!112;CL:0000990!6.02e-12!8;CL:0000839!1.25e-11!70;CL:0000840!1.39e-10!5;CL:0001029!1.39e-10!5;CL:0000775!4.00e-10!3;CL:0000068!6.00e-10!3;CL:0000069!6.00e-10!3;CL:0000307!6.00e-10!3;CL:0000377!6.00e-10!3;CL:0000451!8.39e-10!10;CL:0000738!3.70e-09!140;CL:0002368!2.74e-08!13;CL:0002032!2.61e-07!165;CL:0000837!2.61e-07!165;CL:0000037!6.87e-07!172;CL:0000566!6.87e-07!172;CL:0002031!9.48e-07!124|ontology_enrichment_celltype_v019=CL:0000235;1.99e-147;6!CL:0000473;1.68e-25;39!CL:0000234;1.68e-25;39!CL:0000307;1.74e-09;3!CL:0000766;1.19e-08;69|ontology_enrichment_celltype_v019_2=CL:0000235,1.99e-147,6;CL:0000473,2.69e-25,48;CL:0000234,2.69e-25,48;CL:0002194,2.85e-20,59;CL:0000576,2.85e-20,59;CL:0000040,2.85e-20,59;CL:0000559,2.85e-20,59;CL:0002009,1.27e-19,61;CL:0000839,3.63e-18,66;CL:0000557,6.69e-18,67;CL:0000766,1.11e-16,72;CL:0000763,3.49e-11,108;CL:0000049,3.49e-11,108;CL:0002087,1.65e-10,115;CL:0002031,4.51e-10,120;CL:0000068,1.81e-09,3;CL:0000069,1.81e-09,3;CL:0000307,1.81e-09,3;CL:0000377,1.81e-09,3;CL:0000738,6.88e-09,136;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177|ontology_enrichment_development_v019=CL:0000377;1.74e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!9.55e-12!80;UBERON:0001474!9.16e-11!86;UBERON:0003126!4.81e-09!7;UBERON:0001005!4.81e-09!7;UBERON:0004765!8.09e-09!101;UBERON:0001434!8.09e-09!101;UBERON:0002390!1.04e-08!102;UBERON:0003061!1.04e-08!102;UBERON:0002426!3.11e-08!1;UBERON:0003831!3.11e-08!1;UBERON:0003898!3.11e-08!1;UBERON:0004830!3.11e-08!1;UBERON:0001774!3.11e-08!1;UBERON:0003830!3.11e-08!1;UBERON:0005175!3.11e-08!1;UBERON:0003897!3.11e-08!1;UBERON:0001103!3.11e-08!1;UBERON:0010084!3.11e-08!1;UBERON:0006122!3.83e-08!1;UBERON:0002193!1.01e-07!112;UBERON:0002405!1.85e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.08e-16,76;UBERON:0001474,1.11e-14,82;UBERON:0004765,2.15e-13,90;UBERON:0002405,5.74e-13,93;UBERON:0002390,2.59e-12,98;UBERON:0003061,2.59e-12,98;UBERON:0001434,4.53e-12,100;UBERON:0002193,3.49e-11,108;UBERON:0002204,3.15e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,1.24564449799115,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,7.95614501473408,12.4850176322532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,4.01805673145701,40.058448501776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr20:44638500..44638512,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr20:44638500..44638512,+ | |||
|id=chr20:44638500..44638512,+ | |||
|ontology_enrichment_celltype=CL:0000235!6.03e-25!10;CL:0002009!5.52e-15!65;CL:0000766!1.15e-14!76;CL:0000557!1.58e-13!71;CL:0002194!3.80e-13!63;CL:0000576!3.80e-13!63;CL:0000040!3.80e-13!63;CL:0000559!3.80e-13!63;CL:0000763!3.27e-12!112;CL:0000049!3.27e-12!112;CL:0000990!6.02e-12!8;CL:0000839!1.25e-11!70;CL:0000840!1.39e-10!5;CL:0001029!1.39e-10!5;CL:0000775!4.00e-10!3;CL:0000068!6.00e-10!3;CL:0000069!6.00e-10!3;CL:0000307!6.00e-10!3;CL:0000377!6.00e-10!3;CL:0000451!8.39e-10!10;CL:0000738!3.70e-09!140;CL:0002368!2.74e-08!13;CL:0002032!2.61e-07!165;CL:0000837!2.61e-07!165;CL:0000037!6.87e-07!172;CL:0000566!6.87e-07!172;CL:0002031!9.48e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.99e-147;6!CL:0000473;1.68e-25;39!CL:0000234;1.68e-25;39!CL:0000307;1.74e-09;3!CL:0000766;1.19e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.99e-147,6;CL:0000473,2.69e-25,48;CL:0000234,2.69e-25,48;CL:0002194,2.85e-20,59;CL:0000576,2.85e-20,59;CL:0000040,2.85e-20,59;CL:0000559,2.85e-20,59;CL:0002009,1.27e-19,61;CL:0000839,3.63e-18,66;CL:0000557,6.69e-18,67;CL:0000766,1.11e-16,72;CL:0000763,3.49e-11,108;CL:0000049,3.49e-11,108;CL:0002087,1.65e-10,115;CL:0002031,4.51e-10,120;CL:0000068,1.81e-09,3;CL:0000069,1.81e-09,3;CL:0000307,1.81e-09,3;CL:0000377,1.81e-09,3;CL:0000738,6.88e-09,136;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000377;1.74e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.55e-12!80;UBERON:0001474!9.16e-11!86;UBERON:0003126!4.81e-09!7;UBERON:0001005!4.81e-09!7;UBERON:0004765!8.09e-09!101;UBERON:0001434!8.09e-09!101;UBERON:0002390!1.04e-08!102;UBERON:0003061!1.04e-08!102;UBERON:0002426!3.11e-08!1;UBERON:0003831!3.11e-08!1;UBERON:0003898!3.11e-08!1;UBERON:0004830!3.11e-08!1;UBERON:0001774!3.11e-08!1;UBERON:0003830!3.11e-08!1;UBERON:0005175!3.11e-08!1;UBERON:0003897!3.11e-08!1;UBERON:0001103!3.11e-08!1;UBERON:0010084!3.11e-08!1;UBERON:0006122!3.83e-08!1;UBERON:0002193!1.01e-07!112;UBERON:0002405!1.85e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.08e-16,76;UBERON:0001474,1.11e-14,82;UBERON:0004765,2.15e-13,90;UBERON:0002405,5.74e-13,93;UBERON:0002390,2.59e-12,98;UBERON:0003061,2.59e-12,98;UBERON:0001434,4.53e-12,100;UBERON:0002193,3.49e-11,108;UBERON:0002204,3.15e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,1.24564449799115,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,7.95614501473408,12.4850176322532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,4.01805673145701,40.058448501776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:44638500..44638512,+ | |||
}} |
Revision as of 08:46, 12 September 2013
Short description: | p@chr20:44638500..44638512, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:44638500..44638512, + |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.99e-147 | 6 |
defensive cell | 2.69e-25 | 48 |
phagocyte | 2.69e-25 | 48 |
monopoietic cell | 2.85e-20 | 59 |
monocyte | 2.85e-20 | 59 |
monoblast | 2.85e-20 | 59 |
promonocyte | 2.85e-20 | 59 |
macrophage dendritic cell progenitor | 1.27e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.63e-18 | 66 |
granulocyte monocyte progenitor cell | 6.69e-18 | 67 |
myeloid leukocyte | 1.11e-16 | 72 |
myeloid cell | 3.49e-11 | 108 |
common myeloid progenitor | 3.49e-11 | 108 |
nongranular leukocyte | 1.65e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.51e-10 | 120 |
duct epithelial cell | 1.81e-09 | 3 |
branched duct epithelial cell | 1.81e-09 | 3 |
tracheal epithelial cell | 1.81e-09 | 3 |
tracheoblast | 1.81e-09 | 3 |
leukocyte | 6.88e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.68e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-07 | 161 |
hematopoietic stem cell | 3.48e-07 | 168 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.08e-16 | 76 |
bone element | 1.11e-14 | 82 |
skeletal element | 2.15e-13 | 90 |
immune system | 5.74e-13 | 93 |
hematopoietic system | 2.59e-12 | 98 |
blood island | 2.59e-12 | 98 |
skeletal system | 4.53e-12 | 100 |
hemolymphoid system | 3.49e-11 | 108 |
musculoskeletal system | 3.15e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.