FFCP PHASE1:Hg19::chr20:39518079..39518082,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C314|description=CAGE_peak_at_chr20:39518079..39518082,-|id=chr20:39518079..39518082,-|ontology_enrichment_celltype=CL:0002194!4.90e-47!63;CL:0000576!4.90e-47!63;CL:0000040!4.90e-47!63;CL:0000559!4.90e-47!63;CL:0002009!2.47e-45!65;CL:0000766!7.73e-43!76;CL:0000839!1.69e-41!70;CL:0000557!8.53e-41!71;CL:0002057!4.89e-28!42;CL:0000763!3.58e-26!112;CL:0000049!3.58e-26!112;CL:0000860!8.69e-26!45;CL:0002087!2.39e-22!119;CL:0002031!4.28e-21!124;CL:0000738!1.98e-20!140;CL:0002032!5.94e-16!165;CL:0000837!5.94e-16!165;CL:0000037!6.16e-15!172;CL:0000566!6.16e-15!172;CL:0000988!1.26e-13!182;CL:0000235!4.25e-12!10;CL:0002619!6.30e-10!3|ontology_enrichment_celltype_v019=CL:0000235;1.82e-55;6!CL:0000473;1.75e-28;39!CL:0000234;1.75e-28;39!CL:0000840;1.29e-14;5!CL:0000766;6.52e-12;69!CL:0000860;4.53e-11;33!CL:0002057;4.53e-11;33!CL:0000990;6.38e-10;8!CL:0000451;3.32e-08;10!CL:0000576;1.18e-07;48|ontology_enrichment_celltype_v019_2=CL:0000235,1.91e-55,6;CL:0002194,3.15e-41,59;CL:0000576,3.15e-41,59;CL:0000040,3.15e-41,59;CL:0000559,3.15e-41,59;CL:0002009,8.17e-40,61;CL:0000839,1.20e-36,66;CL:0000557,4.52e-36,67;CL:0000766,2.02e-33,72;CL:0000473,6.28e-30,48;CL:0000234,6.28e-30,48;CL:0000763,1.70e-21,108;CL:0000049,1.70e-21,108;CL:0002087,4.94e-20,115;CL:0002031,4.31e-19,120;CL:0000738,1.54e-16,136;CL:0000840,1.26e-14,5;CL:0001029,1.26e-14,5;CL:0002032,1.49e-13,161;CL:0000837,1.49e-13,161;CL:0000037,7.09e-13,168;CL:0000988,4.42e-12,177;CL:0000990,6.29e-10,8;CL:0000860,9.62e-10,42;CL:0002057,9.62e-10,42;CL:0000451,3.28e-08,10|ontology_enrichment_development_v019=CL:0002057;8.19e-08;42!CL:0000049;2.23e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.97e-35!80;UBERON:0001474!3.36e-32!86;UBERON:0002390!1.51e-31!102;UBERON:0003061!1.51e-31!102;UBERON:0002405!1.21e-28!115;UBERON:0002193!6.65e-28!112;UBERON:0004765!3.80e-26!101;UBERON:0001434!3.80e-26!101;UBERON:0002204!1.56e-13!167;UBERON:0003081!9.24e-13!216|ontology_enrichment_uberon_v019=UBERON:0002171;1.73e-10;1!UBERON:0006518;1.73e-10;1!UBERON:0008949;1.73e-10;1!UBERON:0000101;1.73e-10;1!UBERON:0002167;1.73e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.51e-31,76;UBERON:0001474,4.49e-29,82;UBERON:0002405,1.46e-28,93;UBERON:0002390,5.57e-27,98;UBERON:0003061,5.57e-27,98;UBERON:0004765,2.78e-26,90;UBERON:0002193,3.01e-24,108;UBERON:0001434,2.06e-23,100;UBERON:0003081,3.79e-13,203;UBERON:0002204,5.72e-13,167;UBERON:0002171,2.08e-10,1;UBERON:0006518,2.08e-10,1;UBERON:0008949,2.08e-10,1;UBERON:0000101,2.08e-10,1;UBERON:0002167,2.08e-10,1;UBERON:0000926,2.23e-07,315;UBERON:0004120,2.23e-07,315;UBERON:0006603,2.23e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.619264493264304,0,0,0,0,0,0,0,0.802177789880567,0.651032612147555,0.223915474239924,1.6194683300949,0.257575567634187,0,0,0,2.09186133215116,1.23350366406548,0.929119112685311,0.863077176966451,0,0.236482229888585,2.75796544589295,0.645484683583826,0,0.564727018627814,1.36453075028923,0.224723484445085,0.612167784741805,0.641858054152187,1.27867425159808,0,0.199463657621632,0,0,0,0,1.50749199154046,0.521482918420201,0.65156653411535,0,1.84138817993782,0,0.422510572623884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,7.46459005405772,8.70648686496336,3.19099105245276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46217006087397,13.3382431129365,5.05345951781676,0,0,0,0,0,0,0,0,0,0,0,0,1.14596527667483,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.54099393465,6.52934218861764,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_at_chr20:39518079..39518082,- | |||
|id=chr20:39518079..39518082,- | |||
|ontology_enrichment_celltype=CL:0002194!4.90e-47!63;CL:0000576!4.90e-47!63;CL:0000040!4.90e-47!63;CL:0000559!4.90e-47!63;CL:0002009!2.47e-45!65;CL:0000766!7.73e-43!76;CL:0000839!1.69e-41!70;CL:0000557!8.53e-41!71;CL:0002057!4.89e-28!42;CL:0000763!3.58e-26!112;CL:0000049!3.58e-26!112;CL:0000860!8.69e-26!45;CL:0002087!2.39e-22!119;CL:0002031!4.28e-21!124;CL:0000738!1.98e-20!140;CL:0002032!5.94e-16!165;CL:0000837!5.94e-16!165;CL:0000037!6.16e-15!172;CL:0000566!6.16e-15!172;CL:0000988!1.26e-13!182;CL:0000235!4.25e-12!10;CL:0002619!6.30e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.82e-55;6!CL:0000473;1.75e-28;39!CL:0000234;1.75e-28;39!CL:0000840;1.29e-14;5!CL:0000766;6.52e-12;69!CL:0000860;4.53e-11;33!CL:0002057;4.53e-11;33!CL:0000990;6.38e-10;8!CL:0000451;3.32e-08;10!CL:0000576;1.18e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.91e-55,6;CL:0002194,3.15e-41,59;CL:0000576,3.15e-41,59;CL:0000040,3.15e-41,59;CL:0000559,3.15e-41,59;CL:0002009,8.17e-40,61;CL:0000839,1.20e-36,66;CL:0000557,4.52e-36,67;CL:0000766,2.02e-33,72;CL:0000473,6.28e-30,48;CL:0000234,6.28e-30,48;CL:0000763,1.70e-21,108;CL:0000049,1.70e-21,108;CL:0002087,4.94e-20,115;CL:0002031,4.31e-19,120;CL:0000738,1.54e-16,136;CL:0000840,1.26e-14,5;CL:0001029,1.26e-14,5;CL:0002032,1.49e-13,161;CL:0000837,1.49e-13,161;CL:0000037,7.09e-13,168;CL:0000988,4.42e-12,177;CL:0000990,6.29e-10,8;CL:0000860,9.62e-10,42;CL:0002057,9.62e-10,42;CL:0000451,3.28e-08,10 | |||
|ontology_enrichment_development_v019=CL:0002057;8.19e-08;42!CL:0000049;2.23e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.97e-35!80;UBERON:0001474!3.36e-32!86;UBERON:0002390!1.51e-31!102;UBERON:0003061!1.51e-31!102;UBERON:0002405!1.21e-28!115;UBERON:0002193!6.65e-28!112;UBERON:0004765!3.80e-26!101;UBERON:0001434!3.80e-26!101;UBERON:0002204!1.56e-13!167;UBERON:0003081!9.24e-13!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.73e-10;1!UBERON:0006518;1.73e-10;1!UBERON:0008949;1.73e-10;1!UBERON:0000101;1.73e-10;1!UBERON:0002167;1.73e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.51e-31,76;UBERON:0001474,4.49e-29,82;UBERON:0002405,1.46e-28,93;UBERON:0002390,5.57e-27,98;UBERON:0003061,5.57e-27,98;UBERON:0004765,2.78e-26,90;UBERON:0002193,3.01e-24,108;UBERON:0001434,2.06e-23,100;UBERON:0003081,3.79e-13,203;UBERON:0002204,5.72e-13,167;UBERON:0002171,2.08e-10,1;UBERON:0006518,2.08e-10,1;UBERON:0008949,2.08e-10,1;UBERON:0000101,2.08e-10,1;UBERON:0002167,2.08e-10,1;UBERON:0000926,2.23e-07,315;UBERON:0004120,2.23e-07,315;UBERON:0006603,2.23e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.619264493264304,0,0,0,0,0,0,0,0.802177789880567,0.651032612147555,0.223915474239924,1.6194683300949,0.257575567634187,0,0,0,2.09186133215116,1.23350366406548,0.929119112685311,0.863077176966451,0,0.236482229888585,2.75796544589295,0.645484683583826,0,0.564727018627814,1.36453075028923,0.224723484445085,0.612167784741805,0.641858054152187,1.27867425159808,0,0.199463657621632,0,0,0,0,1.50749199154046,0.521482918420201,0.65156653411535,0,1.84138817993782,0,0.422510572623884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,7.46459005405772,8.70648686496336,3.19099105245276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46217006087397,13.3382431129365,5.05345951781676,0,0,0,0,0,0,0,0,0,0,0,0,1.14596527667483,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.54099393465,6.52934218861764,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,2.07119527673598,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,2.56918800190471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.968833647540092,1.11734485732544,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p@chr20:39518079..39518082,- | |||
}} |
Revision as of 08:29, 12 September 2013
Short description: | p@chr20:39518079..39518082, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:39518079..39518082, - |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.91e-55 | 6 |
monopoietic cell | 3.15e-41 | 59 |
monocyte | 3.15e-41 | 59 |
monoblast | 3.15e-41 | 59 |
promonocyte | 3.15e-41 | 59 |
macrophage dendritic cell progenitor | 8.17e-40 | 61 |
myeloid lineage restricted progenitor cell | 1.20e-36 | 66 |
granulocyte monocyte progenitor cell | 4.52e-36 | 67 |
myeloid leukocyte | 2.02e-33 | 72 |
defensive cell | 6.28e-30 | 48 |
phagocyte | 6.28e-30 | 48 |
myeloid cell | 1.70e-21 | 108 |
common myeloid progenitor | 1.70e-21 | 108 |
nongranular leukocyte | 4.94e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 4.31e-19 | 120 |
leukocyte | 1.54e-16 | 136 |
immature conventional dendritic cell | 1.26e-14 | 5 |
common dendritic progenitor | 1.26e-14 | 5 |
hematopoietic oligopotent progenitor cell | 1.49e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-13 | 161 |
hematopoietic stem cell | 7.09e-13 | 168 |
hematopoietic cell | 4.42e-12 | 177 |
conventional dendritic cell | 6.29e-10 | 8 |
classical monocyte | 9.62e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.62e-10 | 42 |
dendritic cell | 3.28e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.51e-31 | 76 |
bone element | 4.49e-29 | 82 |
immune system | 1.46e-28 | 93 |
hematopoietic system | 5.57e-27 | 98 |
blood island | 5.57e-27 | 98 |
skeletal element | 2.78e-26 | 90 |
hemolymphoid system | 3.01e-24 | 108 |
skeletal system | 2.06e-23 | 100 |
lateral plate mesoderm | 3.79e-13 | 203 |
musculoskeletal system | 5.72e-13 | 167 |
lower lobe of right lung | 2.08e-10 | 1 |
right lung lobe | 2.08e-10 | 1 |
lower lobe of lung | 2.08e-10 | 1 |
lobe of lung | 2.08e-10 | 1 |
right lung | 2.08e-10 | 1 |
mesoderm | 2.23e-07 | 315 |
mesoderm-derived structure | 2.23e-07 | 315 |
presumptive mesoderm | 2.23e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.